| Literature DB >> 21578852 |
Tony V Robinson, Dennis K Taylor, Edward R T Tiekink.
Abstract
The title compound, C(13)H(16)O, comprises two fused five-membered rings. Each ring has an envelope conformation, with the ether O atom in the furan-ose ring, and the CMe(2) atom in the acetonide ring as the flap atoms. In the crystal, centrosymmetrically related mol-ecules associate via hydr-oxy-ether O-H⋯O hydrogen bonds and the resulting dimers are linked into a supra-molecular chain with a flattened topology via C-H⋯O(hydr-oxy) contacts, and aligned in the a-axis direction.Entities:
Year: 2009 PMID: 21578852 PMCID: PMC2972136 DOI: 10.1107/S160053680904848X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H16O4 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2428 reflections | |
| θ = 3.5–27.5° | |
| µ = 0.10 mm−1 | |
| α = 89.76 (3)° | |
| β = 78.72 (2)° | Prism, pale-yellow |
| γ = 73.70 (2)° | 0.35 × 0.35 × 0.10 mm |
| Rigaku AFC12κ/SATURN724 diffractometer | 2408 independent reflections |
| Radiation source: fine-focus sealed tube | 2361 reflections with |
| graphite | |
| ω scans | θmax = 26.5°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 14572 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2408 reflections | (Δ/σ)max < 0.001 |
| 157 parameters | Δρmax = 0.27 e Å−3 |
| 1 restraint | Δρmin = −0.25 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.11375 (18) | 0.89747 (11) | 0.40885 (9) | 0.0294 (3) | |
| O2 | 0.29860 (19) | 0.86868 (13) | 0.42473 (9) | 0.0335 (3) | |
| H2O | 0.2683 | 0.9394 | 0.4747 | 0.050* | |
| O3 | 0.1029 (2) | 0.87393 (12) | 0.15795 (9) | 0.0321 (3) | |
| O4 | −0.09610 (17) | 0.69527 (11) | 0.20274 (8) | 0.0270 (3) | |
| C2 | 0.1242 (3) | 0.91139 (17) | 0.35425 (12) | 0.0281 (3) | |
| H2 | 0.1102 | 1.0170 | 0.3296 | 0.034* | |
| C3 | 0.2058 (3) | 0.79968 (16) | 0.25019 (12) | 0.0264 (3) | |
| H3 | 0.3905 | 0.7548 | 0.2291 | 0.032* | |
| C4 | 0.0642 (2) | 0.67820 (16) | 0.28391 (11) | 0.0248 (3) | |
| C5 | −0.0944 (3) | 0.73843 (16) | 0.40319 (12) | 0.0273 (3) | |
| H5A | −0.2612 | 0.7226 | 0.4120 | 0.033* | |
| H5B | −0.0130 | 0.6864 | 0.4645 | 0.033* | |
| C6 | −0.0013 (3) | 0.77251 (17) | 0.10732 (12) | 0.0300 (4) | |
| C41 | 0.2235 (2) | 0.51612 (16) | 0.28472 (12) | 0.0263 (3) | |
| C42 | 0.4230 (3) | 0.48304 (18) | 0.34152 (13) | 0.0322 (4) | |
| H42 | 0.4620 | 0.5630 | 0.3772 | 0.039* | |
| C43 | 0.5645 (3) | 0.33463 (19) | 0.34623 (15) | 0.0380 (4) | |
| H43 | 0.7000 | 0.3135 | 0.3849 | 0.046* | |
| C44 | 0.5092 (3) | 0.21693 (18) | 0.29478 (14) | 0.0378 (4) | |
| H44 | 0.6059 | 0.1151 | 0.2982 | 0.045* | |
| C45 | 0.3115 (3) | 0.24891 (18) | 0.23827 (13) | 0.0362 (4) | |
| H45 | 0.2735 | 0.1686 | 0.2025 | 0.043* | |
| C46 | 0.1683 (3) | 0.39770 (17) | 0.23361 (12) | 0.0307 (4) | |
| H46 | 0.0323 | 0.4184 | 0.1953 | 0.037* | |
| C61 | 0.1984 (3) | 0.6632 (2) | 0.02004 (14) | 0.0398 (4) | |
| H61A | 0.1252 | 0.5942 | −0.0141 | 0.060* | |
| H61B | 0.3294 | 0.6045 | 0.0582 | 0.060* | |
| H61C | 0.2701 | 0.7202 | −0.0405 | 0.060* | |
| C62 | −0.2175 (3) | 0.8637 (2) | 0.05769 (14) | 0.0397 (4) | |
| H62A | −0.2898 | 0.7948 | 0.0229 | 0.060* | |
| H62B | −0.1591 | 0.9276 | −0.0011 | 0.060* | |
| H62C | −0.3439 | 0.9279 | 0.1191 | 0.060* |
| O1 | 0.0253 (5) | 0.0272 (6) | 0.0334 (6) | −0.0055 (4) | −0.0032 (4) | −0.0028 (4) |
| O2 | 0.0280 (6) | 0.0361 (6) | 0.0352 (6) | −0.0045 (4) | −0.0103 (4) | −0.0069 (4) |
| O3 | 0.0409 (6) | 0.0306 (6) | 0.0301 (6) | −0.0151 (5) | −0.0124 (4) | 0.0082 (4) |
| O4 | 0.0261 (5) | 0.0309 (6) | 0.0258 (5) | −0.0093 (4) | −0.0082 (4) | 0.0054 (4) |
| C2 | 0.0248 (7) | 0.0279 (7) | 0.0316 (7) | −0.0071 (5) | −0.0062 (5) | 0.0009 (6) |
| C3 | 0.0258 (7) | 0.0266 (7) | 0.0272 (7) | −0.0083 (5) | −0.0051 (5) | 0.0028 (5) |
| C4 | 0.0236 (7) | 0.0282 (8) | 0.0237 (7) | −0.0080 (5) | −0.0066 (5) | 0.0025 (5) |
| C5 | 0.0258 (7) | 0.0279 (8) | 0.0274 (7) | −0.0071 (5) | −0.0042 (5) | 0.0014 (5) |
| C6 | 0.0343 (8) | 0.0326 (8) | 0.0258 (7) | −0.0128 (6) | −0.0079 (6) | 0.0056 (6) |
| C41 | 0.0265 (7) | 0.0271 (8) | 0.0243 (6) | −0.0075 (6) | −0.0030 (5) | 0.0025 (5) |
| C42 | 0.0308 (8) | 0.0308 (8) | 0.0358 (8) | −0.0077 (6) | −0.0105 (6) | 0.0022 (6) |
| C43 | 0.0332 (8) | 0.0367 (9) | 0.0420 (9) | −0.0038 (6) | −0.0114 (7) | 0.0070 (7) |
| C44 | 0.0419 (9) | 0.0275 (8) | 0.0365 (8) | −0.0006 (6) | −0.0037 (7) | 0.0053 (6) |
| C45 | 0.0479 (9) | 0.0276 (8) | 0.0325 (8) | −0.0108 (7) | −0.0065 (7) | 0.0011 (6) |
| C46 | 0.0347 (8) | 0.0304 (8) | 0.0283 (7) | −0.0102 (6) | −0.0080 (6) | 0.0031 (6) |
| C61 | 0.0430 (9) | 0.0468 (10) | 0.0281 (8) | −0.0141 (7) | −0.0015 (6) | −0.0018 (7) |
| C62 | 0.0437 (9) | 0.0442 (10) | 0.0355 (8) | −0.0130 (7) | −0.0176 (7) | 0.0125 (7) |
| O1—C2 | 1.4278 (18) | C41—C46 | 1.388 (2) |
| O1—C5 | 1.4370 (19) | C41—C42 | 1.397 (2) |
| O2—C2 | 1.3972 (17) | C42—C43 | 1.385 (2) |
| O2—H2O | 0.8400 | C42—H42 | 0.9500 |
| O3—C6 | 1.4295 (18) | C43—C44 | 1.385 (3) |
| O3—C3 | 1.4254 (17) | C43—H43 | 0.9500 |
| O4—C6 | 1.4323 (18) | C44—C45 | 1.386 (2) |
| O4—C4 | 1.4339 (16) | C44—H44 | 0.9500 |
| C2—C3 | 1.522 (2) | C45—C46 | 1.391 (2) |
| C2—H2 | 1.0000 | C45—H45 | 0.9500 |
| C3—C4 | 1.563 (2) | C46—H46 | 0.9500 |
| C3—H3 | 1.0000 | C61—H61A | 0.9800 |
| C4—C41 | 1.515 (2) | C61—H61B | 0.9800 |
| C4—C5 | 1.535 (2) | C61—H61C | 0.9800 |
| C5—H5A | 0.9900 | C62—H62A | 0.9800 |
| C5—H5B | 0.9900 | C62—H62B | 0.9800 |
| C6—C62 | 1.509 (2) | C62—H62C | 0.9800 |
| C6—C61 | 1.513 (2) | ||
| C2—O1—C5 | 106.30 (11) | O4—C6—C61 | 111.43 (13) |
| C2—O2—H2O | 107.7 | C62—C6—C61 | 113.45 (14) |
| C6—O3—C3 | 107.42 (11) | C46—C41—C42 | 118.91 (14) |
| C6—O4—C4 | 108.29 (10) | C46—C41—C4 | 120.93 (13) |
| O2—C2—O1 | 111.99 (12) | C42—C41—C4 | 120.10 (13) |
| O2—C2—C3 | 108.35 (12) | C43—C42—C41 | 120.58 (15) |
| O1—C2—C3 | 104.47 (11) | C43—C42—H42 | 119.7 |
| O2—C2—H2 | 110.6 | C41—C42—H42 | 119.7 |
| O1—C2—H2 | 110.6 | C44—C43—C42 | 120.26 (15) |
| C3—C2—H2 | 110.6 | C44—C43—H43 | 119.9 |
| O3—C3—C2 | 108.22 (12) | C42—C43—H43 | 119.9 |
| O3—C3—C4 | 104.64 (11) | C43—C44—C45 | 119.46 (15) |
| C2—C3—C4 | 104.60 (11) | C43—C44—H44 | 120.3 |
| O3—C3—H3 | 112.9 | C45—C44—H44 | 120.3 |
| C2—C3—H3 | 112.9 | C46—C45—C44 | 120.51 (15) |
| C4—C3—H3 | 112.9 | C46—C45—H45 | 119.7 |
| O4—C4—C41 | 112.22 (11) | C44—C45—H45 | 119.7 |
| O4—C4—C5 | 108.90 (11) | C45—C46—C41 | 120.27 (14) |
| C41—C4—C5 | 112.12 (12) | C45—C46—H46 | 119.9 |
| O4—C4—C3 | 103.36 (10) | C41—C46—H46 | 119.9 |
| C41—C4—C3 | 116.44 (11) | C6—C61—H61A | 109.5 |
| C5—C4—C3 | 102.99 (11) | C6—C61—H61B | 109.5 |
| O1—C5—C4 | 105.33 (11) | H61A—C61—H61B | 109.5 |
| O1—C5—H5A | 110.7 | C6—C61—H61C | 109.5 |
| C4—C5—H5A | 110.7 | H61A—C61—H61C | 109.5 |
| O1—C5—H5B | 110.7 | H61B—C61—H61C | 109.5 |
| C4—C5—H5B | 110.7 | C6—C62—H62A | 109.5 |
| H5A—C5—H5B | 108.8 | C6—C62—H62B | 109.5 |
| O3—C6—O4 | 104.00 (11) | H62A—C62—H62B | 109.5 |
| O3—C6—C62 | 109.07 (13) | C6—C62—H62C | 109.5 |
| O4—C6—C62 | 108.34 (12) | H62A—C62—H62C | 109.5 |
| O3—C6—C61 | 110.10 (13) | H62B—C62—H62C | 109.5 |
| C5—O1—C2—O2 | −76.45 (14) | C3—O3—C6—O4 | 34.96 (14) |
| C5—O1—C2—C3 | 40.60 (13) | C3—O3—C6—C62 | 150.39 (12) |
| C6—O3—C3—C2 | −133.84 (12) | C3—O3—C6—C61 | −84.52 (14) |
| C6—O3—C3—C4 | −22.73 (13) | C4—O4—C6—O3 | −33.70 (14) |
| O2—C2—C3—O3 | −154.79 (11) | C4—O4—C6—C62 | −149.65 (13) |
| O1—C2—C3—O3 | 85.67 (13) | C4—O4—C6—C61 | 84.87 (14) |
| O2—C2—C3—C4 | 94.07 (13) | O4—C4—C41—C46 | −14.92 (18) |
| O1—C2—C3—C4 | −25.47 (13) | C5—C4—C41—C46 | 108.02 (15) |
| C6—O4—C4—C41 | −107.03 (13) | C3—C4—C41—C46 | −133.74 (14) |
| C6—O4—C4—C5 | 128.23 (12) | O4—C4—C41—C42 | 167.76 (12) |
| C6—O4—C4—C3 | 19.23 (13) | C5—C4—C41—C42 | −69.29 (16) |
| O3—C3—C4—O4 | 2.14 (13) | C3—C4—C41—C42 | 48.95 (18) |
| C2—C3—C4—O4 | 115.84 (12) | C46—C41—C42—C43 | 0.4 (2) |
| O3—C3—C4—C41 | 125.66 (12) | C4—C41—C42—C43 | 177.73 (13) |
| C2—C3—C4—C41 | −120.64 (13) | C41—C42—C43—C44 | −0.2 (2) |
| O3—C3—C4—C5 | −111.22 (12) | C42—C43—C44—C45 | 0.2 (2) |
| C2—C3—C4—C5 | 2.48 (13) | C43—C44—C45—C46 | −0.4 (2) |
| C2—O1—C5—C4 | −39.18 (13) | C44—C45—C46—C41 | 0.6 (2) |
| O4—C4—C5—O1 | −88.03 (13) | C42—C41—C46—C45 | −0.6 (2) |
| C41—C4—C5—O1 | 147.17 (11) | C4—C41—C46—C45 | −177.92 (13) |
| C3—C4—C5—O1 | 21.22 (13) |
| H··· | ||||
| O2—H2o···O1i | 0.84 | 1.93 | 2.755 (2) | 166 |
| C5—H5a···O2ii | 0.99 | 2.47 | 3.296 (3) | 140 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H2o⋯O1i | 0.84 | 1.93 | 2.755 (2) | 166 |
| C5—H5a⋯O2ii | 0.99 | 2.47 | 3.296 (3) | 140 |
Symmetry codes: (i) ; (ii) .