Literature DB >> 21578841

(E)-1-Methyl-4-[2-(1-naphth-yl)vin-yl]pyridinium 4-chloro-benzene-sulfonate.

Suchada Chantrapromma, Kullapa Chanawanno, Hoong-Kun Fun.   

Abstract

In the title compound, C(18)H(16)N(+)·C(6)H(4)ClO(3)S(-), the cation exists in an E configuration with respect to the central C=C bond. The naphthalene ring system is slightly bent, the dihedral angle between the two aromatic rings being 3.71 (14)°. The whole cation is twisted, the dihedral angles between the pyridinium and the two aromatic rings of the naphthalene ring system being 47.44 (14) and 50.81 (14)°. The pyridinium ring and the benzene ring of the anion are inclined to each other at a dihedral angle of 68.21 (13)°. In the crystal structure, the cations and anions are arranged alternately with the cations stacked in an anti-parallel manner along the c axis and the anions linked into chains along the same direction. The cations are linked to the anions by weak C-H⋯O inter-actions, forming a three-dimensional network. The crystal structure is further stabilized by C-H⋯π inter-actions and π-π contacts with centroid-centroid distances of 3.6374 (16) and 3.6733 (17) Å. A short Cl⋯O contact [3.108 (2) Å] is also present.

Entities:  

Year:  2009        PMID: 21578841      PMCID: PMC2971983          DOI: 10.1107/S1600536809047734

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For background to NLO materials, see: Amila et al. (2004 ▶); Babu et al. (2009 ▶); Chandramohan et al. (2008 ▶); Martin et al. (2002 ▶); Srinivasan et al. (2007 ▶); Yildiz et al. (2009 ▶). For related structures, see: Chantrapromma et al. (2007 ▶, 2009 ▶); Fun et al. (2009 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C18H16NC6H4ClO3S M = 437.93 Orthorhombic, a = 12.3379 (8) Å b = 21.8466 (16) Å c = 7.5032 (5) Å V = 2022.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 100 K 0.52 × 0.15 × 0.03 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.852, T max = 0.990 26247 measured reflections 5881 independent reflections 5018 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.119 S = 1.03 5881 reflections 272 parameters 1 restraint H-atom parameters constrained Δρmax = 0.79 e Å−3 Δρmin = −0.32 e Å−3 Absolute structure: Flack (1983 ▶), 2716 Friedel pairs Flack parameter: 0.01 (6) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809047734/is2479sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809047734/is2479Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H16N+·C6H4ClO3SDx = 1.438 Mg m3
Mr = 437.93Melting point = 476–477 K
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 5881 reflections
a = 12.3379 (8) Åθ = 2.5–30.0°
b = 21.8466 (16) ŵ = 0.32 mm1
c = 7.5032 (5) ÅT = 100 K
V = 2022.4 (2) Å3Needle, yellow
Z = 40.52 × 0.15 × 0.03 mm
F(000) = 912
Bruker APEXII CCD area-detector diffractometer5881 independent reflections
Radiation source: sealed tube5018 reflections with I > 2σ(I)
graphiteRint = 0.045
φ and ω scansθmax = 30.0°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −17→17
Tmin = 0.852, Tmax = 0.990k = −25→30
26247 measured reflectionsl = −10→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H-atom parameters constrained
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0563P)2 + 1.1415P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
5881 reflectionsΔρmax = 0.79 e Å3
272 parametersΔρmin = −0.32 e Å3
1 restraintAbsolute structure: Flack (1983), 2716 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.01 (6)
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.09030 (5)0.23662 (3)0.30957 (10)0.02946 (15)
S10.22593 (4)0.33346 (2)0.90465 (9)0.01933 (12)
O10.15823 (14)0.35562 (10)1.0481 (3)0.0330 (5)
O20.28543 (16)0.27849 (8)0.9519 (3)0.0334 (5)
O30.29257 (15)0.37986 (9)0.8218 (3)0.0345 (5)
N11.27331 (16)0.61843 (10)0.6247 (3)0.0254 (5)
C10.8387 (2)0.39813 (12)0.5753 (4)0.0285 (6)
H1A0.90510.38710.52620.034*
C20.7561 (2)0.35470 (13)0.5858 (4)0.0329 (6)
H2A0.76770.31530.54280.040*
C30.6593 (2)0.36949 (13)0.6579 (4)0.0329 (6)
H3A0.60430.34040.66210.040*
C40.6405 (2)0.42940 (13)0.7278 (4)0.0285 (6)
C50.5414 (2)0.44348 (13)0.8145 (4)0.0331 (6)
H5A0.48720.41400.82090.040*
C60.5245 (2)0.49983 (14)0.8888 (4)0.0346 (6)
H6A0.46060.50790.95020.042*
C70.6038 (2)0.54547 (13)0.8719 (4)0.0347 (7)
H7A0.59090.58420.91910.042*
C80.7004 (2)0.53381 (12)0.7868 (4)0.0307 (6)
H8A0.75170.56470.77530.037*
C90.7219 (2)0.47452 (12)0.7161 (4)0.0254 (5)
C100.8240 (2)0.45755 (12)0.6368 (4)0.0270 (6)
C110.9108 (2)0.50246 (12)0.6253 (4)0.0269 (6)
H11A0.89190.54310.60630.032*
C121.0164 (2)0.48887 (12)0.6404 (4)0.0287 (6)
H12A1.03490.44820.66020.034*
C131.1056 (2)0.53391 (12)0.6279 (4)0.0246 (5)
C141.09004 (19)0.59384 (11)0.5685 (4)0.0237 (5)
H14A1.02170.60600.53000.028*
C151.17418 (19)0.63513 (11)0.5659 (4)0.0226 (5)
H15A1.16280.67460.52360.027*
C161.2913 (2)0.56030 (14)0.6814 (4)0.0295 (6)
H16A1.36020.54920.71950.035*
C171.2101 (2)0.51791 (13)0.6835 (4)0.0262 (5)
H17A1.22430.47820.72200.031*
C181.3610 (2)0.66379 (14)0.6319 (5)0.0351 (7)
H18A1.33640.70160.58100.053*
H18B1.42220.64900.56570.053*
H18C1.38170.67040.75370.053*
C190.15667 (19)0.31883 (11)0.5567 (4)0.0236 (5)
H19A0.21910.34000.52500.028*
C200.0877 (2)0.29687 (11)0.4251 (4)0.0252 (5)
H20A0.10340.30340.30530.030*
C21−0.0051 (2)0.26499 (11)0.4749 (4)0.0243 (5)
C22−0.03135 (19)0.25634 (12)0.6525 (4)0.0243 (5)
H22A−0.09460.23580.68390.029*
C230.03806 (19)0.27873 (11)0.7836 (4)0.0218 (5)
H23A0.02120.27330.90340.026*
C240.13284 (19)0.30930 (11)0.7354 (3)0.0200 (5)
U11U22U33U12U13U23
Cl10.0291 (3)0.0304 (3)0.0289 (3)0.0041 (2)−0.0085 (3)−0.0063 (3)
S10.0201 (2)0.0166 (2)0.0212 (3)0.0019 (2)0.0004 (2)0.0021 (2)
O10.0269 (9)0.0453 (11)0.0269 (11)0.0013 (8)−0.0008 (8)−0.0109 (10)
O20.0385 (11)0.0259 (9)0.0359 (12)0.0103 (8)−0.0144 (9)−0.0033 (8)
O30.0330 (9)0.0374 (11)0.0330 (11)−0.0125 (8)−0.0062 (9)0.0090 (10)
N10.0193 (9)0.0272 (11)0.0296 (12)−0.0021 (8)0.0001 (9)−0.0025 (9)
C10.0293 (12)0.0293 (13)0.0268 (14)0.0079 (10)−0.0029 (11)−0.0006 (12)
C20.0407 (15)0.0218 (12)0.0362 (17)−0.0005 (11)−0.0091 (13)−0.0015 (12)
C30.0385 (15)0.0263 (13)0.0340 (17)−0.0031 (11)−0.0076 (13)0.0042 (12)
C40.0308 (12)0.0292 (13)0.0256 (14)0.0020 (11)−0.0024 (11)0.0058 (11)
C50.0294 (12)0.0393 (15)0.0305 (15)−0.0015 (11)−0.0047 (13)0.0090 (14)
C60.0268 (12)0.0488 (16)0.0283 (15)0.0093 (12)0.0010 (13)0.0068 (14)
C70.0346 (13)0.0322 (14)0.0374 (17)0.0130 (11)−0.0045 (12)−0.0006 (13)
C80.0294 (12)0.0215 (12)0.0413 (17)0.0039 (10)−0.0046 (12)0.0033 (12)
C90.0264 (12)0.0246 (12)0.0252 (14)0.0019 (10)0.0000 (11)0.0050 (11)
C100.0265 (12)0.0220 (12)0.0325 (15)−0.0011 (10)−0.0055 (11)0.0016 (11)
C110.0285 (12)0.0227 (12)0.0297 (15)−0.0004 (10)0.0006 (11)0.0013 (11)
C120.0322 (13)0.0228 (13)0.0313 (16)0.0018 (10)−0.0036 (12)0.0014 (11)
C130.0248 (11)0.0215 (11)0.0274 (14)0.0027 (9)0.0025 (11)−0.0030 (10)
C140.0203 (10)0.0222 (11)0.0285 (14)0.0013 (9)0.0043 (10)−0.0010 (11)
C150.0226 (11)0.0215 (11)0.0239 (13)0.0011 (9)0.0037 (10)0.0019 (10)
C160.0255 (12)0.0361 (15)0.0268 (14)0.0087 (11)−0.0039 (11)−0.0023 (12)
C170.0303 (13)0.0250 (12)0.0233 (13)0.0046 (10)0.0035 (11)0.0021 (10)
C180.0219 (12)0.0359 (15)0.0475 (19)−0.0072 (11)−0.0005 (12)−0.0064 (14)
C190.0233 (11)0.0217 (11)0.0256 (13)−0.0005 (9)−0.0004 (10)0.0017 (10)
C200.0305 (12)0.0242 (12)0.0210 (13)0.0039 (9)0.0011 (11)0.0013 (11)
C210.0243 (11)0.0210 (11)0.0277 (14)0.0038 (9)−0.0066 (10)−0.0020 (10)
C220.0204 (11)0.0245 (12)0.0280 (14)0.0005 (9)−0.0020 (10)0.0013 (11)
C230.0215 (10)0.0212 (11)0.0226 (14)0.0026 (9)0.0005 (10)0.0003 (10)
C240.0206 (10)0.0182 (11)0.0211 (12)0.0024 (9)−0.0007 (9)0.0021 (9)
Cl1—C211.740 (3)C10—C111.455 (4)
S1—O11.446 (2)C11—C121.341 (4)
S1—O31.446 (2)C11—H11A0.9300
S1—O21.4514 (18)C12—C131.480 (4)
S1—C241.792 (3)C12—H12A0.9300
N1—C151.350 (3)C13—C141.396 (4)
N1—C161.358 (4)C13—C171.400 (4)
N1—C181.468 (3)C14—C151.375 (3)
C1—C101.389 (4)C14—H14A0.9300
C1—C21.395 (4)C15—H15A0.9300
C1—H1A0.9300C16—C171.364 (4)
C2—C31.351 (4)C16—H16A0.9300
C2—H2A0.9300C17—H17A0.9300
C3—C41.429 (4)C18—H18A0.9600
C3—H3A0.9300C18—H18B0.9600
C4—C91.410 (4)C18—H18C0.9600
C4—C51.419 (4)C19—C241.388 (4)
C5—C61.367 (4)C19—C201.389 (4)
C5—H5A0.9300C19—H19A0.9300
C6—C71.402 (4)C20—C211.392 (4)
C6—H6A0.9300C20—H20A0.9300
C7—C81.376 (4)C21—C221.384 (4)
C7—H7A0.9300C22—C231.393 (4)
C8—C91.425 (4)C22—H22A0.9300
C8—H8A0.9300C23—C241.395 (3)
C9—C101.441 (4)C23—H23A0.9300
O1—S1—O3114.45 (13)C11—C12—C13124.8 (2)
O1—S1—O2112.79 (13)C11—C12—H12A117.6
O3—S1—O2113.43 (12)C13—C12—H12A117.6
O1—S1—C24104.83 (11)C14—C13—C17117.1 (2)
O3—S1—C24105.43 (12)C14—C13—C12122.8 (2)
O2—S1—C24104.70 (11)C17—C13—C12120.0 (2)
C15—N1—C16120.2 (2)C15—C14—C13121.0 (2)
C15—N1—C18119.8 (2)C15—C14—H14A119.5
C16—N1—C18120.0 (2)C13—C14—H14A119.5
C10—C1—C2121.4 (3)N1—C15—C14120.1 (2)
C10—C1—H1A119.3N1—C15—H15A119.9
C2—C1—H1A119.3C14—C15—H15A119.9
C3—C2—C1120.4 (3)N1—C16—C17121.2 (2)
C3—C2—H2A119.8N1—C16—H16A119.4
C1—C2—H2A119.8C17—C16—H16A119.4
C2—C3—C4120.6 (3)C16—C17—C13120.2 (2)
C2—C3—H3A119.7C16—C17—H17A119.9
C4—C3—H3A119.7C13—C17—H17A119.9
C9—C4—C5119.4 (3)N1—C18—H18A109.5
C9—C4—C3120.2 (3)N1—C18—H18B109.5
C5—C4—C3120.4 (3)H18A—C18—H18B109.5
C6—C5—C4120.9 (3)N1—C18—H18C109.5
C6—C5—H5A119.6H18A—C18—H18C109.5
C4—C5—H5A119.6H18B—C18—H18C109.5
C5—C6—C7119.8 (3)C24—C19—C20120.3 (2)
C5—C6—H6A120.1C24—C19—H19A119.8
C7—C6—H6A120.1C20—C19—H19A119.8
C8—C7—C6120.9 (3)C19—C20—C21119.1 (3)
C8—C7—H7A119.5C19—C20—H20A120.5
C6—C7—H7A119.5C21—C20—H20A120.5
C7—C8—C9120.2 (3)C22—C21—C20121.3 (2)
C7—C8—H8A119.9C22—C21—Cl1119.7 (2)
C9—C8—H8A119.9C20—C21—Cl1119.0 (2)
C4—C9—C8118.6 (2)C21—C22—C23119.2 (2)
C4—C9—C10117.9 (2)C21—C22—H22A120.4
C8—C9—C10123.4 (2)C23—C22—H22A120.4
C1—C10—C9119.4 (2)C22—C23—C24120.0 (3)
C1—C10—C11121.0 (3)C22—C23—H23A120.0
C9—C10—C11119.6 (2)C24—C23—H23A120.0
C12—C11—C10124.1 (2)C19—C24—C23120.0 (2)
C12—C11—H11A118.0C19—C24—S1120.30 (18)
C10—C11—H11A118.0C23—C24—S1119.6 (2)
C10—C1—C2—C3−0.5 (5)C17—C13—C14—C15−0.3 (4)
C1—C2—C3—C4−1.2 (5)C12—C13—C14—C15177.2 (3)
C2—C3—C4—C92.4 (4)C16—N1—C15—C142.0 (4)
C2—C3—C4—C5−175.6 (3)C18—N1—C15—C14−176.2 (3)
C9—C4—C5—C6−0.9 (4)C13—C14—C15—N1−1.3 (4)
C3—C4—C5—C6177.1 (3)C15—N1—C16—C17−1.1 (4)
C4—C5—C6—C73.1 (5)C18—N1—C16—C17177.1 (3)
C5—C6—C7—C8−2.2 (5)N1—C16—C17—C13−0.5 (5)
C6—C7—C8—C9−0.9 (5)C14—C13—C17—C161.2 (4)
C5—C4—C9—C8−2.1 (4)C12—C13—C17—C16−176.4 (3)
C3—C4—C9—C8179.8 (3)C24—C19—C20—C21−0.3 (4)
C5—C4—C9—C10176.3 (3)C19—C20—C21—C221.8 (4)
C3—C4—C9—C10−1.8 (4)C19—C20—C21—Cl1−179.12 (19)
C7—C8—C9—C43.0 (4)C20—C21—C22—C23−1.6 (4)
C7—C8—C9—C10−175.3 (3)Cl1—C21—C22—C23179.36 (18)
C2—C1—C10—C91.1 (4)C21—C22—C23—C24−0.2 (4)
C2—C1—C10—C11180.0 (3)C20—C19—C24—C23−1.4 (4)
C4—C9—C10—C10.1 (4)C20—C19—C24—S1176.12 (18)
C8—C9—C10—C1178.4 (3)C22—C23—C24—C191.7 (4)
C4—C9—C10—C11−178.8 (3)C22—C23—C24—S1−175.90 (18)
C8—C9—C10—C11−0.5 (4)O1—S1—C24—C19142.5 (2)
C1—C10—C11—C12−33.3 (4)O3—S1—C24—C1921.3 (2)
C9—C10—C11—C12145.6 (3)O2—S1—C24—C19−98.6 (2)
C10—C11—C12—C13179.6 (3)O1—S1—C24—C23−40.0 (2)
C11—C12—C13—C14−11.4 (5)O3—S1—C24—C23−161.1 (2)
C11—C12—C13—C17166.1 (3)O2—S1—C24—C2379.0 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O30.932.513.370 (3)153
C11—H11A···O1i0.932.343.267 (3)178
C14—H14A···O1i0.932.383.260 (3)158
C15—H15A···O2ii0.932.423.285 (3)155
C17—H17A···O3iii0.932.433.348 (3)171
C18—H18A···O2ii0.962.453.372 (4)160
C20—H20A···O1iv0.932.343.226 (4)159
C22—H22A···O2v0.932.523.277 (3)139
C1—H1A···Cg4iii0.932.983.682 (3)133
C3—H3A···Cg4vi0.932.873.651 (3)142
C6—H6A···Cg3vii0.932.823.593 (3)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5A⋯O30.932.513.370 (3)153
C11—H11A⋯O1i 0.932.343.267 (3)178
C14—H14A⋯O1i 0.932.383.260 (3)158
C15—H15A⋯O2ii 0.932.423.285 (3)155
C17—H17A⋯O3iii 0.932.433.348 (3)171
C18—H18A⋯O2ii 0.962.453.372 (4)160
C20—H20A⋯O1iv 0.932.343.226 (4)159
C22—H22A⋯O2v 0.932.523.277 (3)139
C1—H1ACg4iii 0.932.983.682 (3)133
C3—H3ACg4vi 0.932.873.651 (3)142
C6—H6ACg3vii 0.932.823.593 (3)141

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) . Cg1, Cg2, Cg3 and Cg4 are the centroids of the N1/C13–C17, C1–C4/C9/C10, C4–C9 and C19–C24 rings, respectively.

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,1'-Dimethyl-4,4'-(2,4-di-1-naphthyl-cyclo-butane-1,3-di-yl)dipyridinium-(E)-1-methyl-4-[2-(1-naphth-yl)vin-yl]pyridinium-4-amino-benzene-sulfonate-water (0.25/1.50/2/2).

Authors:  Hoong-Kun Fun; Kullapa Chanawanno; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-31

3.  (E)-1-Methyl-4-[2-(1-naphth-yl)vin-yl]pyridinium 4-bromo-benzene-sulfonate.

Authors:  Suchada Chantrapromma; Kullapa Chanawanno; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-30

4.  Synthesis, crystal growth, structural, thermal and optical properties of naphthalene picrate an organic NLO material.

Authors:  A Chandramohan; R Bharathikannan; V Kandavelu; J Chandrasekaran; M A Kandhaswamy
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2008-02-14       Impact factor: 4.098

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  2 in total

1.  1-Methyl-4-[(1E,3E)-4-phenyl-buta-1,3-dien-yl]pyridinium iodide monohydrate.

Authors:  Hoong-Kun Fun; Kullapa Chanawanno; Chanasuk Surasit; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-20

2.  1-Methyl-2-[(E)-2-(2-thien-yl)ethen-yl]quinolinium 4-bromo-benzene-sulfonate.

Authors:  Hoong-Kun Fun; Thawanrat Kobkeatthawin; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-10
  2 in total

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