Literature DB >> 21578837

3-(2-Amino-1,3-thia-zol-4-yl)-6-chloro-2H-chromen-2-one.

Deepak Chopra, A R Choudhury, K N Venugopala, Thavendran Govender, Hendrik G Kruger, Glenn E M Maguire, T N Guru Row.   

Abstract

The title compound, C(12)H(7)ClN(2)O(2)S, crystallizes with two mol-ecules in the asymmetric unit. The mol-ecular conformation is roughly planar for both these mol-ecules with maximum deviations of 0.177 (3) and 0.076 (4) Å from their respective mean planes. In the crystal, strong N-H⋯N and weak but highly directional C-H⋯O hydrogen bonds provide the links between the mol-ecules. The structure is further stabilised by aromatic π-π stacking inter-actions with centroid-centroid distances in the range 3.650 (3)-3.960 (3) Å.

Entities:  

Year:  2009        PMID: 21578837      PMCID: PMC2971916          DOI: 10.1107/S1600536809048247

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of coumarin compounds in photochemistry, see: Vishnumurthy et al. (2001 ▶). For their roles as dyes, laser dyes and in probing ultrafast solvation effects see: Morris & Rusell (1971 ▶); Khalfan et al., (1987 ▶); Maroncelli & Fleming (1987 ▶). For graph set motifs, see: Bernstein et al. (1995 ▶). For the synthesis of the title compound, see: Venugopal et al. (2004 ▶). For related structures see: Vishnumurthy et al. (2001 ▶).

Experimental

Crystal data

C12H7ClN2O2S M = 278.72 Monoclinic, a = 12.494 (8) Å b = 7.350 (5) Å c = 25.013 (15) Å β = 98.156 (12)° V = 2274 (3) Å3 Z = 8 Mo Kα radiation μ = 0.51 mm−1 T = 290 K 0.20 × 0.10 × 0.02 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick (1996 ▶) T min = 0.885, T max = 0.990 16106 measured reflections 4165 independent reflections 2561 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.118 S = 1.01 4165 reflections 325 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1993 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809048247/sj2672sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048247/sj2672Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H7ClN2O2SF(000) = 1136
Mr = 278.72Dx = 1.628 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 845 reflections
a = 12.494 (8) Åθ = 1.6–25.8°
b = 7.350 (5) ŵ = 0.51 mm1
c = 25.013 (15) ÅT = 290 K
β = 98.156 (12)°Plate, yellow
V = 2274 (3) Å30.20 × 0.10 × 0.02 mm
Z = 8
Bruker SMART CCD area detector diffractometer4165 independent reflections
Radiation source: fine-focus sealed tube2561 reflections with I > 2σ(I)
graphiteRint = 0.054
φ and ω scansθmax = 25.4°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick (1996)h = −15→15
Tmin = 0.885, Tmax = 0.990k = −8→8
16106 measured reflectionsl = −29→30
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.118H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0493P)2] where P = (Fo2 + 2Fc2)/3
4165 reflections(Δ/σ)max < 0.001
325 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.23200 (7)0.90698 (12)0.22923 (3)0.0415 (2)
S20.28374 (8)0.49152 (15)0.13304 (4)0.0563 (3)
Cl10.07808 (7)0.52598 (14)0.60106 (3)0.0559 (3)
Cl20.12399 (7)0.11642 (12)0.50115 (3)0.0533 (3)
O10.44938 (19)0.7077 (4)0.37710 (10)0.0724 (8)
O20.39831 (17)0.6431 (3)0.45510 (9)0.0475 (6)
O30.45453 (17)0.2376 (3)0.36083 (9)0.0485 (6)
O40.50908 (19)0.3322 (4)0.28593 (10)0.0684 (8)
N10.12697 (19)0.8694 (3)0.31039 (10)0.0338 (6)
N20.0231 (3)0.9983 (5)0.23312 (13)0.0502 (9)
N30.1780 (2)0.4062 (3)0.21072 (10)0.0365 (6)
N40.0660 (3)0.4837 (5)0.13067 (14)0.0530 (9)
C10.3740 (3)0.6983 (5)0.40182 (14)0.0436 (9)
C20.2602 (2)0.7400 (4)0.38192 (12)0.0308 (7)
C30.1857 (3)0.7177 (4)0.41557 (13)0.0332 (8)
C40.1379 (3)0.6270 (4)0.50590 (13)0.0366 (8)
C50.1731 (3)0.5640 (4)0.55710 (13)0.0370 (8)
C60.2809 (3)0.5279 (5)0.57507 (15)0.0444 (9)
C70.3557 (3)0.5552 (5)0.54048 (14)0.0436 (9)
C80.3206 (2)0.6182 (4)0.48857 (13)0.0353 (8)
C90.2130 (2)0.6547 (4)0.47006 (12)0.0319 (7)
C100.2323 (2)0.8062 (4)0.32644 (12)0.0317 (7)
C110.1171 (3)0.9292 (4)0.26057 (13)0.0352 (8)
C120.2989 (3)0.8191 (4)0.28810 (13)0.0388 (8)
C130.4323 (3)0.3045 (5)0.30836 (14)0.0443 (9)
C140.3174 (2)0.3330 (4)0.28654 (12)0.0340 (8)
C150.2416 (3)0.3064 (4)0.31904 (13)0.0346 (8)
C160.1909 (3)0.2176 (4)0.40798 (13)0.0354 (8)
C170.2229 (3)0.1554 (4)0.45952 (13)0.0378 (8)
C180.3301 (3)0.1209 (5)0.47895 (14)0.0441 (9)
C190.4068 (3)0.1491 (5)0.44523 (15)0.0484 (10)
C200.3756 (3)0.2112 (4)0.39311 (13)0.0384 (8)
C210.2678 (2)0.2457 (4)0.37355 (12)0.0315 (7)
C220.2884 (2)0.3895 (4)0.23001 (13)0.0357 (8)
C230.1654 (3)0.4575 (4)0.16061 (13)0.0375 (8)
C240.3552 (3)0.4296 (5)0.19410 (14)0.0487 (10)
H2A−0.03331.00750.24920.062*
H2B0.02141.03760.20080.062*
H30.11380.74420.40280.039*
H40.06480.65050.49500.044*
H4A0.00830.46640.14500.063*
H4B0.06140.51850.09760.063*
H60.30280.48490.60990.053*
H70.42890.53230.55150.052*
H120.37120.78460.29280.047*
H150.16940.32730.30530.041*
H160.11810.24060.39600.042*
H180.35020.07950.51400.053*
H190.47990.12620.45750.057*
H240.43030.42390.20100.059*
U11U22U33U12U13U23
S10.0423 (5)0.0528 (6)0.0305 (5)−0.0011 (4)0.0088 (4)0.0006 (4)
S20.0480 (6)0.0865 (8)0.0360 (5)−0.0034 (5)0.0115 (4)0.0097 (5)
Cl10.0482 (6)0.0858 (8)0.0339 (5)−0.0029 (5)0.0069 (4)0.0074 (5)
Cl20.0571 (6)0.0611 (6)0.0452 (6)0.0043 (5)0.0192 (5)0.0086 (5)
N10.0300 (14)0.0429 (17)0.0278 (15)−0.0001 (12)0.0019 (12)0.0017 (12)
N20.039 (2)0.076 (3)0.0348 (19)0.0068 (18)0.0018 (15)0.0118 (18)
N30.0352 (16)0.0448 (17)0.0299 (16)0.0003 (13)0.0055 (12)0.0012 (13)
N40.045 (2)0.076 (3)0.037 (2)0.0023 (18)0.0042 (17)0.0137 (18)
O10.0354 (15)0.132 (3)0.0524 (17)0.0247 (16)0.0163 (13)0.0260 (17)
O20.0306 (12)0.0713 (17)0.0400 (14)0.0133 (12)0.0030 (11)0.0089 (13)
O30.0298 (13)0.0725 (17)0.0423 (15)0.0043 (12)0.0021 (11)0.0100 (12)
O40.0332 (14)0.118 (2)0.0566 (17)0.0055 (15)0.0144 (13)0.0211 (16)
C10.039 (2)0.052 (2)0.041 (2)0.0098 (17)0.0071 (17)0.0030 (18)
C20.0300 (17)0.0317 (19)0.0310 (18)0.0053 (14)0.0054 (14)−0.0028 (14)
C30.0269 (19)0.0353 (19)0.035 (2)0.0018 (15)−0.0019 (16)−0.0002 (15)
C40.0264 (19)0.040 (2)0.040 (2)0.0022 (15)−0.0052 (16)0.0005 (16)
C50.039 (2)0.038 (2)0.0329 (19)−0.0025 (16)0.0025 (15)−0.0023 (15)
C60.047 (2)0.051 (2)0.032 (2)0.0050 (18)−0.0068 (17)0.0015 (18)
C70.032 (2)0.055 (2)0.041 (2)0.0079 (18)−0.0040 (17)0.0004 (18)
C80.0329 (18)0.0380 (19)0.0345 (19)0.0044 (15)0.0032 (15)−0.0041 (16)
C90.0303 (18)0.0296 (18)0.0350 (19)0.0034 (14)0.0024 (15)−0.0001 (14)
C100.0322 (18)0.0339 (19)0.0285 (18)0.0001 (15)0.0027 (14)−0.0030 (15)
C110.0360 (19)0.0357 (19)0.0333 (19)−0.0048 (15)0.0025 (15)−0.0029 (15)
C120.035 (2)0.045 (2)0.038 (2)0.0007 (17)0.0097 (16)−0.0035 (16)
C130.035 (2)0.058 (2)0.039 (2)0.0054 (17)0.0053 (17)0.0029 (18)
C140.0294 (18)0.0353 (19)0.0372 (19)−0.0003 (14)0.0044 (15)−0.0022 (15)
C150.0269 (19)0.039 (2)0.036 (2)−0.0015 (16)−0.0037 (15)0.0005 (16)
C160.034 (2)0.034 (2)0.038 (2)0.0010 (16)0.0022 (17)0.0013 (16)
C170.046 (2)0.0333 (19)0.036 (2)−0.0013 (16)0.0108 (16)−0.0002 (15)
C180.048 (2)0.050 (2)0.033 (2)0.0004 (18)−0.0014 (18)0.0029 (18)
C190.030 (2)0.064 (3)0.048 (2)0.0042 (18)−0.0097 (18)0.0080 (19)
C200.0322 (19)0.043 (2)0.038 (2)−0.0008 (16)0.0008 (15)0.0002 (16)
C210.0293 (17)0.0329 (19)0.0313 (19)0.0010 (14)0.0006 (14)−0.0019 (14)
C220.0324 (18)0.038 (2)0.037 (2)−0.0023 (15)0.0052 (15)−0.0010 (16)
C230.037 (2)0.040 (2)0.034 (2)−0.0023 (15)0.0020 (16)−0.0031 (16)
C240.040 (2)0.065 (3)0.042 (2)−0.0030 (19)0.0088 (18)0.0055 (19)
S1—C121.713 (4)C13—C141.475 (4)
S1—C111.738 (3)C7—C61.376 (5)
Cl2—C171.749 (3)C7—H70.9300
Cl1—C51.750 (3)C2—C101.464 (4)
S2—C241.714 (4)C2—C11.470 (5)
S2—C231.736 (3)C15—C141.347 (4)
C3—C21.349 (4)C15—H150.9300
C3—C91.436 (4)C22—C241.347 (4)
C3—H30.9300C22—C141.467 (4)
O3—C201.371 (4)C23—N41.369 (4)
O3—C131.392 (4)C10—C121.364 (4)
O2—C81.381 (4)C5—C41.375 (4)
O2—C11.385 (4)C5—C61.388 (5)
N3—C231.298 (4)C1—O11.200 (4)
N3—C221.402 (4)C18—C191.381 (5)
C8—C91.385 (4)C18—C171.385 (5)
C8—C71.387 (4)C18—H180.9300
C16—C171.372 (4)C11—N21.369 (4)
C16—C211.395 (4)C6—H60.9300
C16—H160.9300C4—H40.9300
C21—C201.392 (4)C24—H240.9300
C21—C151.429 (4)C19—H190.9300
C9—C41.402 (4)C12—H120.9300
C20—C191.385 (4)N4—H4A0.8600
N1—C111.311 (4)N4—H4B0.8600
N1—C101.401 (4)N2—H2A0.8600
C13—O41.196 (4)N2—H2B0.8600
C12—S1—C1189.03 (16)C12—C10—N1114.5 (3)
C24—S2—C2388.61 (17)C12—C10—C2127.5 (3)
C2—C3—C9122.6 (3)N1—C10—C2118.0 (3)
C2—C3—H3118.7C15—C14—C22121.5 (3)
C9—C3—H3118.7C15—C14—C13119.1 (3)
C20—O3—C13122.8 (3)C22—C14—C13119.3 (3)
C8—O2—C1123.1 (3)C4—C5—C6122.3 (3)
C23—N3—C22109.8 (3)C4—C5—Cl1118.9 (3)
O2—C8—C9120.2 (3)C6—C5—Cl1118.8 (3)
O2—C8—C7117.0 (3)O1—C1—O2115.5 (3)
C9—C8—C7122.8 (3)O1—C1—C2127.3 (3)
C17—C16—C21119.6 (3)O2—C1—C2117.1 (3)
C17—C16—H16120.2C19—C18—C17119.0 (3)
C21—C16—H16120.2C19—C18—H18120.5
C20—C21—C16118.3 (3)C17—C18—H18120.5
C20—C21—C15118.2 (3)N1—C11—N2123.8 (3)
C16—C21—C15123.4 (3)N1—C11—S1115.1 (2)
C8—C9—C4117.7 (3)N2—C11—S1121.0 (3)
C8—C9—C3118.0 (3)C16—C17—C18122.0 (3)
C4—C9—C3124.2 (3)C16—C17—Cl2118.5 (3)
O3—C20—C19118.0 (3)C18—C17—Cl2119.5 (3)
O3—C20—C21120.4 (3)C7—C6—C5119.0 (3)
C19—C20—C21121.6 (3)C7—C6—H6120.5
C11—N1—C10110.0 (3)C5—C6—H6120.5
O4—C13—O3115.8 (3)C5—C4—C9119.3 (3)
O4—C13—C14127.3 (3)C5—C4—H4120.4
O3—C13—C14116.9 (3)C9—C4—H4120.4
C6—C7—C8118.9 (3)C22—C24—S2111.1 (3)
C6—C7—H7120.5C22—C24—H24124.4
C8—C7—H7120.5S2—C24—H24124.4
C3—C2—C10122.6 (3)C18—C19—C20119.9 (3)
C3—C2—C1118.9 (3)C18—C19—H19120.2
C10—C2—C1118.5 (3)C20—C19—H19120.2
C14—C15—C21122.3 (3)C10—C12—S1111.2 (2)
C14—C15—H15118.8C10—C12—H12124.4
C21—C15—H15118.8S1—C12—H12124.4
C24—C22—N3114.9 (3)C23—N4—H4A120.0
C24—C22—C14128.1 (3)C23—N4—H4B120.0
N3—C22—C14117.0 (3)H4A—N4—H4B120.0
N3—C23—N4123.2 (3)C11—N2—H2A120.0
N3—C23—S2115.5 (3)C11—N2—H2B120.0
N4—C23—S2121.3 (3)H2A—N2—H2B120.0
D—H···AD—HH···AD···AD—H···A
N2—H2A···N3i0.862.313.124 (4)158
N4—H4A···N1ii0.862.273.116 (4)168
C7—H7···O2iii0.932.543.387 (4)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯N3i 0.862.313.124 (4)158
N4—H4A⋯N1ii 0.862.273.116 (4)168
C7—H7⋯O2iii 0.932.543.387 (4)152

Symmetry codes: (i) ; (ii) ; (iii) .

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