| Literature DB >> 21578826 |
Ying Liang, Hong-Wu He, Zi-Wen Yang.
Abstract
In the title compound, C(19)H(15)FN(4)S(2), the mean plane of the thia-zolopyrimidine makes a dihedral angle of 77.6 (1)° with the attached phenyl ring. The crystal packing is stabilized by inter-molecular C-H⋯N hydrogen bonds and weak C-H-π stacking inter-actions.Entities:
Year: 2009 PMID: 21578826 PMCID: PMC2971921 DOI: 10.1107/S1600536809047576
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H15FN4S2 | |
| Monoclinic, | Mo |
| Cell parameters from 5242 reflections | |
| θ = 2.5–27.9° | |
| µ = 0.32 mm−1 | |
| β = 91.531 (3)° | |
| Block, colorless | |
| 0.30 × 0.20 × 0.20 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 4047 independent reflections |
| Radiation source: fine-focus sealed tube | 3442 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 13207 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4047 reflections | (Δ/σ)max = 0.001 |
| 238 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4958 (2) | 1.34258 (14) | 0.58804 (13) | 0.0535 (5) | |
| C2 | 0.4537 (2) | 1.33892 (14) | 0.50835 (13) | 0.0542 (5) | |
| H2 | 0.4863 | 1.3917 | 0.4726 | 0.065* | |
| C3 | 0.3607 (2) | 1.25414 (15) | 0.48189 (11) | 0.0502 (4) | |
| H3 | 0.3306 | 1.2503 | 0.4276 | 0.060* | |
| C4 | 0.31153 (19) | 1.17484 (13) | 0.53462 (11) | 0.0429 (4) | |
| C5 | 0.3617 (2) | 1.18055 (15) | 0.61453 (11) | 0.0504 (4) | |
| H5 | 0.3335 | 1.1265 | 0.6503 | 0.060* | |
| C6 | 0.4530 (2) | 1.26536 (16) | 0.64208 (12) | 0.0572 (5) | |
| H6 | 0.4846 | 1.2697 | 0.6961 | 0.069* | |
| C7 | 0.2083 (2) | 1.08369 (14) | 0.50454 (11) | 0.0482 (4) | |
| H7A | 0.1203 | 1.1133 | 0.4745 | 0.058* | |
| H7B | 0.1696 | 1.0439 | 0.5503 | 0.058* | |
| C8 | 0.29661 (19) | 1.00780 (14) | 0.45073 (12) | 0.0467 (4) | |
| H8A | 0.3450 | 1.0496 | 0.4087 | 0.056* | |
| H8B | 0.3782 | 0.9732 | 0.4827 | 0.056* | |
| C9 | 0.10871 (19) | 0.95138 (14) | 0.34270 (10) | 0.0422 (4) | |
| C10 | 0.03504 (19) | 0.85689 (13) | 0.30865 (10) | 0.0411 (4) | |
| C11 | 0.04789 (18) | 0.75959 (13) | 0.34560 (9) | 0.0379 (3) | |
| C12 | 0.1989 (2) | 0.82329 (14) | 0.44484 (11) | 0.0458 (4) | |
| H12 | 0.2567 | 0.8135 | 0.4925 | 0.055* | |
| C13 | −0.0990 (2) | 0.70793 (14) | 0.23294 (10) | 0.0445 (4) | |
| C14 | −0.02508 (18) | 0.56612 (13) | 0.33171 (10) | 0.0402 (4) | |
| C15 | 0.0719 (3) | 0.49373 (17) | 0.29640 (13) | 0.0621 (5) | |
| H15 | 0.1341 | 0.5146 | 0.2541 | 0.075* | |
| C16 | 0.0753 (3) | 0.38912 (19) | 0.32496 (16) | 0.0780 (7) | |
| H16 | 0.1398 | 0.3386 | 0.3014 | 0.094* | |
| C17 | −0.0147 (3) | 0.35897 (17) | 0.38718 (18) | 0.0776 (8) | |
| H17 | −0.0116 | 0.2881 | 0.4058 | 0.093* | |
| C18 | −0.1101 (3) | 0.4326 (2) | 0.42259 (16) | 0.0739 (7) | |
| H18 | −0.1711 | 0.4117 | 0.4653 | 0.089* | |
| C19 | −0.1156 (2) | 0.53768 (16) | 0.39494 (12) | 0.0554 (5) | |
| H19 | −0.1796 | 0.5882 | 0.4188 | 0.066* | |
| N1 | 0.19862 (15) | 0.92398 (11) | 0.41267 (8) | 0.0411 (3) | |
| N2 | 0.12708 (17) | 0.73932 (11) | 0.41615 (9) | 0.0459 (3) | |
| N3 | 0.1072 (2) | 1.04959 (13) | 0.31970 (11) | 0.0605 (4) | |
| H3A | 0.052 (3) | 1.0564 (19) | 0.2764 (15) | 0.073* | |
| N4 | −0.02702 (16) | 0.67676 (11) | 0.30352 (8) | 0.0397 (3) | |
| F1 | 0.58230 (17) | 1.42773 (10) | 0.61527 (9) | 0.0823 (4) | |
| S1 | −0.07386 (6) | 0.84673 (4) | 0.21932 (3) | 0.05356 (16) | |
| S2 | −0.19713 (7) | 0.63041 (4) | 0.16868 (3) | 0.06299 (18) |
| C1 | 0.0557 (10) | 0.0390 (9) | 0.0653 (12) | −0.0015 (7) | −0.0051 (9) | −0.0124 (8) |
| C2 | 0.0649 (11) | 0.0400 (9) | 0.0579 (12) | −0.0030 (8) | 0.0053 (9) | 0.0022 (8) |
| C3 | 0.0616 (11) | 0.0468 (10) | 0.0418 (9) | 0.0013 (8) | −0.0036 (8) | −0.0013 (7) |
| C4 | 0.0455 (9) | 0.0374 (8) | 0.0457 (9) | 0.0022 (7) | 0.0017 (7) | −0.0069 (7) |
| C5 | 0.0657 (11) | 0.0424 (9) | 0.0431 (10) | 0.0013 (8) | 0.0027 (8) | −0.0003 (7) |
| C6 | 0.0738 (13) | 0.0516 (11) | 0.0456 (10) | 0.0017 (9) | −0.0113 (9) | −0.0088 (8) |
| C7 | 0.0463 (9) | 0.0461 (9) | 0.0523 (10) | −0.0049 (7) | 0.0040 (8) | −0.0077 (8) |
| C8 | 0.0384 (8) | 0.0437 (9) | 0.0576 (11) | −0.0028 (7) | −0.0038 (7) | −0.0108 (8) |
| C9 | 0.0456 (9) | 0.0420 (9) | 0.0391 (8) | −0.0044 (7) | 0.0005 (7) | 0.0010 (7) |
| C10 | 0.0478 (9) | 0.0415 (8) | 0.0337 (8) | −0.0036 (7) | −0.0048 (7) | 0.0028 (6) |
| C11 | 0.0403 (8) | 0.0388 (8) | 0.0344 (8) | −0.0022 (6) | −0.0019 (6) | −0.0006 (6) |
| C12 | 0.0493 (9) | 0.0426 (9) | 0.0448 (10) | 0.0028 (7) | −0.0131 (7) | −0.0014 (7) |
| C13 | 0.0541 (10) | 0.0429 (9) | 0.0361 (8) | −0.0027 (7) | −0.0056 (7) | 0.0005 (7) |
| C14 | 0.0455 (8) | 0.0356 (8) | 0.0390 (8) | −0.0024 (6) | −0.0096 (7) | −0.0015 (6) |
| C15 | 0.0763 (14) | 0.0584 (12) | 0.0516 (11) | 0.0159 (10) | 0.0021 (10) | −0.0024 (9) |
| C16 | 0.1057 (19) | 0.0501 (12) | 0.0772 (16) | 0.0275 (12) | −0.0187 (14) | −0.0099 (11) |
| C17 | 0.0875 (16) | 0.0422 (11) | 0.101 (2) | −0.0070 (11) | −0.0404 (15) | 0.0170 (11) |
| C18 | 0.0622 (12) | 0.0699 (15) | 0.0891 (17) | −0.0130 (11) | −0.0077 (11) | 0.0346 (13) |
| C19 | 0.0493 (10) | 0.0549 (11) | 0.0621 (12) | 0.0020 (8) | 0.0031 (8) | 0.0128 (9) |
| N1 | 0.0389 (7) | 0.0388 (7) | 0.0453 (8) | −0.0018 (5) | −0.0053 (6) | −0.0052 (6) |
| N2 | 0.0560 (8) | 0.0401 (7) | 0.0409 (8) | −0.0006 (6) | −0.0147 (6) | 0.0024 (6) |
| N3 | 0.0840 (12) | 0.0420 (8) | 0.0547 (10) | −0.0113 (8) | −0.0114 (9) | 0.0082 (7) |
| N4 | 0.0479 (7) | 0.0373 (7) | 0.0335 (7) | −0.0034 (5) | −0.0060 (5) | 0.0010 (5) |
| F1 | 0.0964 (10) | 0.0541 (7) | 0.0954 (10) | −0.0209 (7) | −0.0147 (8) | −0.0206 (7) |
| S1 | 0.0767 (3) | 0.0453 (3) | 0.0377 (3) | −0.0082 (2) | −0.0170 (2) | 0.00820 (18) |
| S2 | 0.0860 (4) | 0.0531 (3) | 0.0483 (3) | −0.0078 (2) | −0.0276 (3) | −0.0050 (2) |
| C1—C2 | 1.359 (3) | C10—S1 | 1.7356 (16) |
| C1—F1 | 1.362 (2) | C11—N2 | 1.361 (2) |
| C1—C6 | 1.367 (3) | C11—N4 | 1.390 (2) |
| C2—C3 | 1.386 (3) | C12—N2 | 1.294 (2) |
| C2—H2 | 0.9300 | C12—N1 | 1.355 (2) |
| C3—C4 | 1.387 (3) | C12—H12 | 0.9300 |
| C3—H3 | 0.9300 | C13—N4 | 1.364 (2) |
| C4—C5 | 1.382 (2) | C13—S2 | 1.6501 (17) |
| C4—C7 | 1.515 (2) | C13—S1 | 1.7472 (18) |
| C5—C6 | 1.384 (3) | C14—C15 | 1.369 (3) |
| C5—H5 | 0.9300 | C14—C19 | 1.369 (3) |
| C6—H6 | 0.9300 | C14—N4 | 1.447 (2) |
| C7—C8 | 1.515 (2) | C15—C16 | 1.378 (3) |
| C7—H7A | 0.9700 | C15—H15 | 0.9300 |
| C7—H7B | 0.9700 | C16—C17 | 1.359 (4) |
| C8—N1 | 1.470 (2) | C16—H16 | 0.9300 |
| C8—H8A | 0.9700 | C17—C18 | 1.371 (4) |
| C8—H8B | 0.9700 | C17—H17 | 0.9300 |
| C9—N3 | 1.274 (2) | C18—C19 | 1.379 (3) |
| C9—N1 | 1.418 (2) | C18—H18 | 0.9300 |
| C9—C10 | 1.439 (2) | C19—H19 | 0.9300 |
| C10—C11 | 1.354 (2) | N3—H3A | 0.86 (2) |
| C2—C1—F1 | 118.50 (18) | C10—C11—N2 | 125.78 (15) |
| C2—C1—C6 | 122.77 (17) | C10—C11—N4 | 113.49 (14) |
| F1—C1—C6 | 118.72 (18) | N2—C11—N4 | 120.72 (14) |
| C1—C2—C3 | 118.01 (18) | N2—C12—N1 | 126.76 (15) |
| C1—C2—H2 | 121.0 | N2—C12—H12 | 116.6 |
| C3—C2—H2 | 121.0 | N1—C12—H12 | 116.6 |
| C2—C3—C4 | 121.47 (17) | N4—C13—S2 | 127.02 (13) |
| C2—C3—H3 | 119.3 | N4—C13—S1 | 109.46 (12) |
| C4—C3—H3 | 119.3 | S2—C13—S1 | 123.52 (10) |
| C5—C4—C3 | 118.15 (16) | C15—C14—C19 | 121.81 (18) |
| C5—C4—C7 | 121.30 (16) | C15—C14—N4 | 118.95 (17) |
| C3—C4—C7 | 120.54 (16) | C19—C14—N4 | 119.19 (15) |
| C4—C5—C6 | 121.04 (18) | C14—C15—C16 | 118.4 (2) |
| C4—C5—H5 | 119.5 | C14—C15—H15 | 120.8 |
| C6—C5—H5 | 119.5 | C16—C15—H15 | 120.8 |
| C1—C6—C5 | 118.50 (18) | C17—C16—C15 | 120.7 (2) |
| C1—C6—H6 | 120.7 | C17—C16—H16 | 119.7 |
| C5—C6—H6 | 120.7 | C15—C16—H16 | 119.7 |
| C4—C7—C8 | 110.67 (14) | C16—C17—C18 | 120.3 (2) |
| C4—C7—H7A | 109.5 | C16—C17—H17 | 119.9 |
| C8—C7—H7A | 109.5 | C18—C17—H17 | 119.9 |
| C4—C7—H7B | 109.5 | C17—C18—C19 | 120.1 (2) |
| C8—C7—H7B | 109.5 | C17—C18—H18 | 120.0 |
| H7A—C7—H7B | 108.1 | C19—C18—H18 | 120.0 |
| N1—C8—C7 | 113.30 (14) | C14—C19—C18 | 118.7 (2) |
| N1—C8—H8A | 108.9 | C14—C19—H19 | 120.6 |
| C7—C8—H8A | 108.9 | C18—C19—H19 | 120.6 |
| N1—C8—H8B | 108.9 | C12—N1—C9 | 122.40 (13) |
| C7—C8—H8B | 108.9 | C12—N1—C8 | 119.05 (14) |
| H8A—C8—H8B | 107.7 | C9—N1—C8 | 118.54 (14) |
| N3—C9—N1 | 118.24 (15) | C12—N2—C11 | 113.08 (14) |
| N3—C9—C10 | 131.12 (16) | C9—N3—H3A | 110.2 (16) |
| N1—C9—C10 | 110.63 (14) | C13—N4—C11 | 114.58 (13) |
| C11—C10—C9 | 121.06 (15) | C13—N4—C14 | 123.01 (13) |
| C11—C10—S1 | 110.87 (12) | C11—N4—C14 | 122.39 (12) |
| C9—C10—S1 | 128.06 (12) | C10—S1—C13 | 91.60 (8) |
| F1—C1—C2—C3 | −177.55 (17) | C17—C18—C19—C14 | 0.3 (3) |
| C6—C1—C2—C3 | 1.4 (3) | N2—C12—N1—C9 | 3.5 (3) |
| C1—C2—C3—C4 | −0.1 (3) | N2—C12—N1—C8 | −175.59 (17) |
| C2—C3—C4—C5 | −1.9 (3) | N3—C9—N1—C12 | 175.35 (18) |
| C2—C3—C4—C7 | 179.23 (16) | C10—C9—N1—C12 | −5.8 (2) |
| C3—C4—C5—C6 | 2.7 (3) | N3—C9—N1—C8 | −5.6 (2) |
| C7—C4—C5—C6 | −178.48 (17) | C10—C9—N1—C8 | 173.26 (14) |
| C2—C1—C6—C5 | −0.7 (3) | C7—C8—N1—C12 | −100.26 (19) |
| F1—C1—C6—C5 | 178.28 (18) | C7—C8—N1—C9 | 80.6 (2) |
| C4—C5—C6—C1 | −1.4 (3) | N1—C12—N2—C11 | 1.3 (3) |
| C5—C4—C7—C8 | −109.01 (19) | C10—C11—N2—C12 | −3.2 (3) |
| C3—C4—C7—C8 | 69.8 (2) | N4—C11—N2—C12 | 175.53 (15) |
| C4—C7—C8—N1 | −173.93 (15) | S2—C13—N4—C11 | 179.73 (13) |
| N3—C9—C10—C11 | −177.3 (2) | S1—C13—N4—C11 | −0.73 (19) |
| N1—C9—C10—C11 | 4.0 (2) | S2—C13—N4—C14 | 1.2 (3) |
| N3—C9—C10—S1 | 4.0 (3) | S1—C13—N4—C14 | −179.28 (13) |
| N1—C9—C10—S1 | −174.59 (13) | C10—C11—N4—C13 | 0.2 (2) |
| C9—C10—C11—N2 | 0.3 (3) | N2—C11—N4—C13 | −178.63 (15) |
| S1—C10—C11—N2 | 179.18 (14) | C10—C11—N4—C14 | 178.81 (15) |
| C9—C10—C11—N4 | −178.47 (15) | N2—C11—N4—C14 | −0.1 (2) |
| S1—C10—C11—N4 | 0.37 (19) | C15—C14—N4—C13 | 76.3 (2) |
| C19—C14—C15—C16 | 1.2 (3) | C19—C14—N4—C13 | −106.2 (2) |
| N4—C14—C15—C16 | 178.58 (18) | C15—C14—N4—C11 | −102.1 (2) |
| C14—C15—C16—C17 | −0.5 (4) | C19—C14—N4—C11 | 75.4 (2) |
| C15—C16—C17—C18 | −0.2 (4) | C11—C10—S1—C13 | −0.66 (14) |
| C16—C17—C18—C19 | 0.3 (4) | C9—C10—S1—C13 | 178.08 (17) |
| C15—C14—C19—C18 | −1.1 (3) | N4—C13—S1—C10 | 0.78 (14) |
| N4—C14—C19—C18 | −178.46 (17) | S2—C13—S1—C10 | −179.66 (13) |
| H··· | ||||
| C15—H15···N3i | 0.93 | 2.61 | 3.486 (3) | 156 |
| C19—H19···Cg3ii | 0.93 | 2.74 | 3.637 (2) | 161 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C15—H15⋯N3i | 0.93 | 2.61 | 3.486 (3) | 156 |
| C19—H19⋯ | 0.93 | 2.74 | 3.637 (2) | 161 |
Symmetry codes: (i) ; (ii) . Cg3 is the centroid of the C1–C6 ring.