| Literature DB >> 21578817 |
Henry Galas, Russell D Viirre, Alan J Lough.
Abstract
The crystal structure determination of the title compound, C(15)H(14)N(2)O, confirms the cis relationship between the phenyl groups at the 4- and 5-positions on the imidazolidine ring. The dihedral angle between the two phenyl rings is 48.14 (6)°. In the crystal structure, inter-molecular N-H⋯O hydrogen bonds link mol-ecules into centrosymmetric dimers. These dimers are, in turn, linked into a two-dimensional network via weak N-H⋯π(arene) inter-actions and π-π stacking inter-actions with centroid-centroid distances of 3.6937 (11) Å.Entities:
Year: 2009 PMID: 21578817 PMCID: PMC2971968 DOI: 10.1107/S1600536809046133
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H14N2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6535 reflections | |
| θ = 3.0–27.5° | |
| µ = 0.09 mm−1 | |
| α = 86.147 (3)° | |
| β = 76.094 (3)° | Plate, colourless |
| γ = 82.718 (3)° | 0.20 × 0.20 × 0.08 mm |
| Nonius KappaCCD diffractometer | 2685 independent reflections |
| Radiation source: fine-focus sealed tube | 1771 reflections with |
| graphite | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 6535 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2685 reflections | Δρmax = 0.25 e Å−3 |
| 172 parameters | Δρmin = −0.25 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.043 (9) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.5277 (2) | 0.41749 (16) | 0.65182 (13) | 0.0402 (4) | |
| N1 | 0.2254 (3) | 0.55213 (18) | 0.59441 (15) | 0.0298 (4) | |
| N2 | 0.2105 (3) | 0.50802 (19) | 0.79050 (15) | 0.0310 (4) | |
| C1 | 0.0274 (3) | 0.6470 (2) | 0.65473 (17) | 0.0264 (4) | |
| H1A | −0.0938 | 0.6328 | 0.6156 | 0.032* | |
| C2 | 0.3394 (3) | 0.4852 (2) | 0.67556 (18) | 0.0308 (5) | |
| C3 | −0.0134 (3) | 0.5630 (2) | 0.78442 (17) | 0.0283 (5) | |
| H3A | −0.0926 | 0.4701 | 0.7831 | 0.034* | |
| C4 | 0.0525 (3) | 0.8203 (2) | 0.65330 (16) | 0.0243 (4) | |
| C5 | 0.2551 (3) | 0.8742 (2) | 0.63592 (17) | 0.0288 (5) | |
| H5A | 0.3829 | 0.8014 | 0.6267 | 0.035* | |
| C6 | 0.2724 (3) | 1.0331 (2) | 0.63194 (18) | 0.0315 (5) | |
| H6A | 0.4118 | 1.0687 | 0.6195 | 0.038* | |
| C7 | 0.0879 (3) | 1.1399 (2) | 0.64589 (18) | 0.0318 (5) | |
| H7A | 0.1004 | 1.2489 | 0.6430 | 0.038* | |
| C8 | −0.1151 (3) | 1.0882 (2) | 0.66414 (17) | 0.0317 (5) | |
| H8A | −0.2426 | 1.1614 | 0.6741 | 0.038* | |
| C9 | −0.1316 (3) | 0.9287 (2) | 0.66781 (17) | 0.0278 (5) | |
| H9A | −0.2713 | 0.8934 | 0.6805 | 0.033* | |
| C10 | −0.1371 (3) | 0.6618 (2) | 0.88918 (16) | 0.0259 (4) | |
| C11 | −0.0311 (3) | 0.7520 (2) | 0.94856 (17) | 0.0297 (5) | |
| H11A | 0.1228 | 0.7514 | 0.9233 | 0.036* | |
| C12 | −0.1480 (3) | 0.8430 (2) | 1.04446 (18) | 0.0338 (5) | |
| H12A | −0.0735 | 0.9030 | 1.0852 | 0.041* | |
| C13 | −0.3712 (3) | 0.8468 (2) | 1.08089 (18) | 0.0339 (5) | |
| H13A | −0.4510 | 0.9103 | 1.1459 | 0.041* | |
| C14 | −0.4787 (3) | 0.7580 (2) | 1.02265 (19) | 0.0364 (5) | |
| H14A | −0.6328 | 0.7603 | 1.0479 | 0.044* | |
| C15 | −0.3626 (3) | 0.6652 (2) | 0.92714 (17) | 0.0307 (5) | |
| H15A | −0.4376 | 0.6039 | 0.8878 | 0.037* | |
| H2N | 0.248 (3) | 0.441 (3) | 0.846 (2) | 0.035 (6)* | |
| H1N | 0.297 (3) | 0.569 (2) | 0.514 (2) | 0.040 (6)* |
| O1 | 0.0377 (9) | 0.0356 (8) | 0.0365 (9) | 0.0126 (7) | 0.0019 (7) | 0.0053 (6) |
| N1 | 0.0339 (10) | 0.0250 (8) | 0.0261 (9) | 0.0018 (7) | −0.0011 (7) | −0.0002 (7) |
| N2 | 0.0309 (10) | 0.0292 (9) | 0.0270 (9) | 0.0048 (7) | −0.0014 (7) | 0.0069 (7) |
| C1 | 0.0257 (10) | 0.0249 (9) | 0.0265 (10) | −0.0011 (8) | −0.0025 (8) | −0.0022 (8) |
| C2 | 0.0338 (12) | 0.0231 (10) | 0.0314 (11) | 0.0017 (8) | −0.0030 (9) | 0.0025 (8) |
| C3 | 0.0265 (10) | 0.0236 (9) | 0.0324 (10) | −0.0035 (8) | −0.0019 (8) | 0.0000 (8) |
| C4 | 0.0262 (10) | 0.0269 (10) | 0.0189 (9) | −0.0010 (8) | −0.0048 (7) | 0.0006 (7) |
| C5 | 0.0279 (11) | 0.0279 (10) | 0.0299 (10) | −0.0008 (8) | −0.0070 (8) | 0.0013 (8) |
| C6 | 0.0328 (11) | 0.0335 (11) | 0.0296 (11) | −0.0088 (9) | −0.0077 (9) | 0.0003 (8) |
| C7 | 0.0420 (12) | 0.0253 (10) | 0.0270 (10) | −0.0048 (9) | −0.0056 (9) | −0.0015 (8) |
| C8 | 0.0334 (12) | 0.0284 (10) | 0.0292 (11) | 0.0047 (9) | −0.0041 (9) | 0.0001 (8) |
| C9 | 0.0245 (10) | 0.0302 (10) | 0.0275 (10) | −0.0021 (8) | −0.0047 (8) | 0.0006 (8) |
| C10 | 0.0262 (10) | 0.0227 (9) | 0.0259 (10) | −0.0024 (8) | −0.0026 (8) | 0.0057 (7) |
| C11 | 0.0269 (10) | 0.0310 (10) | 0.0296 (10) | −0.0081 (8) | −0.0017 (8) | 0.0013 (8) |
| C12 | 0.0444 (13) | 0.0292 (10) | 0.0277 (11) | −0.0119 (9) | −0.0045 (9) | 0.0012 (8) |
| C13 | 0.0402 (13) | 0.0303 (11) | 0.0258 (10) | 0.0024 (9) | −0.0009 (9) | 0.0001 (8) |
| C14 | 0.0262 (11) | 0.0460 (13) | 0.0326 (11) | 0.0013 (9) | −0.0024 (9) | 0.0032 (10) |
| C15 | 0.0288 (11) | 0.0336 (11) | 0.0288 (10) | −0.0052 (8) | −0.0047 (8) | −0.0001 (8) |
| O1—C2 | 1.238 (2) | C6—H6A | 0.9500 |
| N1—C2 | 1.358 (3) | C7—C8 | 1.382 (3) |
| N1—C1 | 1.456 (2) | C7—H7A | 0.9500 |
| N1—H1N | 0.93 (2) | C8—C9 | 1.389 (3) |
| N2—C2 | 1.373 (3) | C8—H8A | 0.9500 |
| N2—C3 | 1.458 (3) | C9—H9A | 0.9500 |
| N2—H2N | 0.87 (2) | C10—C11 | 1.389 (3) |
| C1—C4 | 1.520 (2) | C10—C15 | 1.391 (3) |
| C1—C3 | 1.571 (3) | C11—C12 | 1.387 (3) |
| C1—H1A | 1.0000 | C11—H11A | 0.9500 |
| C3—C10 | 1.506 (3) | C12—C13 | 1.375 (3) |
| C3—H3A | 1.0000 | C12—H12A | 0.9500 |
| C4—C9 | 1.386 (3) | C13—C14 | 1.380 (3) |
| C4—C5 | 1.389 (3) | C13—H13A | 0.9500 |
| C5—C6 | 1.384 (3) | C14—C15 | 1.392 (3) |
| C5—H5A | 0.9500 | C14—H14A | 0.9500 |
| C6—C7 | 1.379 (3) | C15—H15A | 0.9500 |
| C2—N1—C1 | 111.46 (16) | C5—C6—H6A | 119.9 |
| C2—N1—H1N | 119.9 (13) | C6—C7—C8 | 119.96 (17) |
| C1—N1—H1N | 123.4 (13) | C6—C7—H7A | 120.0 |
| C2—N2—C3 | 110.27 (16) | C8—C7—H7A | 120.0 |
| C2—N2—H2N | 113.6 (14) | C7—C8—C9 | 119.57 (18) |
| C3—N2—H2N | 124.9 (14) | C7—C8—H8A | 120.2 |
| N1—C1—C4 | 113.60 (15) | C9—C8—H8A | 120.2 |
| N1—C1—C3 | 99.73 (14) | C4—C9—C8 | 121.04 (17) |
| C4—C1—C3 | 114.88 (14) | C4—C9—H9A | 119.5 |
| N1—C1—H1A | 109.4 | C8—C9—H9A | 119.5 |
| C4—C1—H1A | 109.4 | C11—C10—C15 | 118.79 (18) |
| C3—C1—H1A | 109.4 | C11—C10—C3 | 121.43 (17) |
| O1—C2—N1 | 126.79 (18) | C15—C10—C3 | 119.77 (17) |
| O1—C2—N2 | 125.27 (18) | C12—C11—C10 | 120.59 (18) |
| N1—C2—N2 | 107.93 (17) | C12—C11—H11A | 119.7 |
| N2—C3—C10 | 113.62 (16) | C10—C11—H11A | 119.7 |
| N2—C3—C1 | 100.24 (14) | C13—C12—C11 | 120.32 (19) |
| C10—C3—C1 | 116.28 (14) | C13—C12—H12A | 119.8 |
| N2—C3—H3A | 108.8 | C11—C12—H12A | 119.8 |
| C10—C3—H3A | 108.8 | C12—C13—C14 | 119.72 (19) |
| C1—C3—H3A | 108.8 | C12—C13—H13A | 120.1 |
| C9—C4—C5 | 118.61 (16) | C14—C13—H13A | 120.1 |
| C9—C4—C1 | 119.26 (16) | C13—C14—C15 | 120.36 (19) |
| C5—C4—C1 | 122.12 (16) | C13—C14—H14A | 119.8 |
| C6—C5—C4 | 120.56 (18) | C15—C14—H14A | 119.8 |
| C6—C5—H5A | 119.7 | C10—C15—C14 | 120.20 (18) |
| C4—C5—H5A | 119.7 | C10—C15—H15A | 119.9 |
| C7—C6—C5 | 120.26 (18) | C14—C15—H15A | 119.9 |
| C7—C6—H6A | 119.9 |
| H··· | ||||
| N1—H1N···O1i | 0.93 (2) | 1.94 (2) | 2.864 (2) | 173 (2) |
| N2—H2N···Cg1ii | 0.87 (2) | 2.46 (2) | 3.322 (2) | 165 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.93 (2) | 1.94 (2) | 2.864 (2) | 173 (2) |
| N2—H2 | 0.87 (2) | 2.46 (2) | 3.322 (2) | 165 (2) |
Symmetry codes: (i) ; (ii) . Cg1 is the centroid of the C4–C9 ring.