Literature DB >> 21578810

(E)-Benzyl 3-(3-nitro-benzyl-idene)dithio-carbazate.

Huan-Qiu Li1, Yin Luo, Xuan Qin, Hai-Liang Zhu.   

Abstract

In the title compound, C(15)H(13)N(3)O(2)S(2), the dihedral angle between the aromatic rings is 87.8 (2)°. In the crystal, inversion dimers occur linked by pairs of N-H⋯S hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578810      PMCID: PMC2971807          DOI: 10.1107/S1600536809045723

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to carbodithio­ates, see: Tarafder et al. (2002 ▶).

Experimental

Crystal data

C15H13N3O2S2 M = 331.40 Monoclinic, a = 5.2175 (10) Å b = 26.213 (5) Å c = 11.887 (2) Å β = 90.67 (3)° V = 1625.6 (6) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 293 K 0.30 × 0.30 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.906, T max = 0.967 9486 measured reflections 2788 independent reflections 951 reflections with I > 2σ(I) R int = 0.097 200 standard reflections every 3 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.106 S = 0.73 2788 reflections 211 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809045723/hb5203sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045723/hb5203Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H13N3O2S2F(000) = 688
Mr = 331.40Dx = 1.354 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 5.2175 (10) Åθ = 9–12°
b = 26.213 (5) ŵ = 0.34 mm1
c = 11.887 (2) ÅT = 293 K
β = 90.67 (3)°Block, yellow
V = 1625.6 (6) Å30.30 × 0.30 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer951 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.097
graphiteθmax = 25.0°, θmin = 1.9°
ω/2θ scansh = −6→5
Absorption correction: ψ scan (North et al., 1968)k = −31→29
Tmin = 0.906, Tmax = 0.967l = −14→14
9486 measured reflections200 standard reflections every 3 reflections
2788 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.106H atoms treated by a mixture of independent and constrained refinement
S = 0.73w = 1/[σ2(Fo2) + (0.0448P)2] where P = (Fo2 + 2Fc2)/3
2788 reflections(Δ/σ)max < 0.001
211 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.5564 (10)0.38939 (18)1.0058 (4)0.1065 (16)
H11.66130.37870.94770.128*
C21.5833 (10)0.36729 (18)1.1102 (5)0.1215 (18)
H21.70700.34231.12220.146*
C31.4312 (11)0.38176 (19)1.1951 (4)0.0986 (14)
H31.44910.36681.26580.118*
C41.2549 (11)0.4177 (2)1.1770 (4)0.1203 (18)
H41.14740.42751.23490.144*
C51.2307 (9)0.44050 (17)1.0726 (5)0.1170 (17)
H51.10950.46611.06160.140*
C61.3817 (9)0.42606 (17)0.9862 (4)0.0740 (11)
C71.3604 (11)0.4511 (2)0.8717 (4)0.0893 (15)
C81.0763 (8)0.45488 (13)0.6740 (3)0.0662 (10)
C90.5747 (8)0.38503 (16)0.5578 (3)0.0740 (12)
H90.54120.40630.49670.089*
C100.4214 (8)0.33846 (15)0.5727 (3)0.0648 (10)
C110.2307 (8)0.32751 (16)0.4958 (3)0.0716 (11)
H110.19400.34990.43710.086*
C120.0946 (8)0.28268 (18)0.5071 (4)0.0763 (12)
C130.1352 (9)0.24961 (16)0.5946 (4)0.0997 (15)
H130.03890.21990.60140.120*
C140.3244 (9)0.26178 (18)0.6727 (4)0.1020 (15)
H140.35630.23990.73290.122*
C150.4658 (8)0.30577 (16)0.6623 (3)0.0838 (12)
H150.59170.31360.71560.101*
H1A0.851 (7)0.4589 (13)0.540 (3)0.100 (15)*
N10.8928 (7)0.43995 (14)0.6035 (3)0.0779 (10)
N20.7523 (7)0.39663 (13)0.6274 (3)0.0739 (9)
N3−0.1075 (8)0.27046 (17)0.4218 (4)0.0953 (12)
O1−0.1536 (6)0.30218 (13)0.3506 (3)0.1166 (11)
O2−0.2120 (8)0.22932 (15)0.4285 (3)0.1572 (16)
S11.1060 (2)0.41799 (4)0.79464 (9)0.0806 (4)
S21.2592 (2)0.50568 (4)0.64490 (9)0.0898 (4)
H7A1.508 (7)0.4456 (14)0.827 (3)0.109 (17)*
H7B1.308 (8)0.4842 (16)0.871 (3)0.14 (2)*
U11U22U33U12U13U23
C10.121 (4)0.107 (4)0.092 (4)0.028 (3)0.039 (3)0.019 (3)
C20.128 (4)0.128 (4)0.109 (4)0.051 (3)0.027 (4)0.034 (4)
C30.108 (4)0.102 (4)0.085 (4)0.000 (3)−0.004 (3)0.005 (3)
C40.135 (5)0.142 (5)0.084 (4)0.029 (4)0.022 (3)−0.002 (3)
C50.123 (4)0.132 (4)0.097 (4)0.060 (3)0.015 (3)0.008 (3)
C60.070 (3)0.076 (3)0.076 (3)−0.005 (2)−0.005 (3)−0.001 (3)
C70.077 (4)0.109 (5)0.082 (4)−0.009 (3)−0.010 (3)0.016 (3)
C80.063 (3)0.068 (3)0.068 (3)−0.002 (2)0.001 (2)0.007 (2)
C90.080 (3)0.078 (3)0.064 (3)−0.005 (3)0.002 (3)0.005 (2)
C100.063 (3)0.063 (3)0.068 (3)−0.006 (2)0.006 (2)0.000 (2)
C110.068 (3)0.079 (3)0.067 (3)−0.007 (3)0.003 (3)0.005 (2)
C120.070 (3)0.089 (4)0.069 (3)−0.012 (3)−0.002 (3)0.000 (3)
C130.103 (4)0.089 (3)0.107 (4)−0.033 (3)−0.017 (3)0.027 (3)
C140.111 (4)0.087 (4)0.108 (4)−0.020 (3)−0.015 (3)0.035 (3)
C150.094 (3)0.078 (3)0.079 (3)−0.006 (3)−0.013 (2)0.012 (3)
N10.080 (3)0.079 (3)0.075 (3)−0.010 (2)−0.008 (2)0.015 (2)
N20.076 (3)0.068 (2)0.077 (2)−0.005 (2)0.002 (2)0.0053 (19)
N30.096 (3)0.097 (4)0.094 (3)−0.010 (3)−0.005 (3)0.000 (3)
O10.114 (3)0.127 (3)0.108 (2)−0.019 (2)−0.031 (2)0.016 (2)
O20.180 (4)0.141 (3)0.150 (3)−0.082 (3)−0.045 (3)0.017 (3)
S10.0798 (8)0.0879 (8)0.0741 (7)−0.0113 (6)0.0010 (6)0.0101 (6)
S20.0950 (9)0.0826 (8)0.0917 (8)−0.0215 (7)−0.0063 (6)0.0142 (6)
C1—C61.343 (5)C9—N21.272 (4)
C1—C21.375 (5)C9—C101.471 (5)
C1—H10.9300C9—H90.9300
C2—C31.346 (5)C10—C111.373 (4)
C2—H20.9300C10—C151.384 (5)
C3—C41.332 (5)C11—C121.380 (5)
C3—H30.9300C11—H110.9300
C4—C51.381 (5)C12—C131.368 (5)
C4—H40.9300C12—N31.489 (5)
C5—C61.355 (5)C13—C141.384 (5)
C5—H50.9300C13—H130.9300
C6—C71.514 (5)C14—C151.375 (5)
C7—S11.823 (5)C14—H140.9300
C7—H7A0.95 (4)C15—H150.9300
C7—H7B0.91 (4)N1—N21.383 (4)
C8—N11.324 (4)N1—H1A0.93 (3)
C8—S21.676 (4)N3—O11.208 (4)
C8—S11.735 (4)N3—O21.212 (4)
C6—C1—C2121.3 (4)N2—C9—H9119.6
C6—C1—H1119.3C10—C9—H9119.6
C2—C1—H1119.3C11—C10—C15119.7 (4)
C3—C2—C1120.2 (5)C11—C10—C9118.9 (4)
C3—C2—H2119.9C15—C10—C9121.3 (4)
C1—C2—H2119.9C10—C11—C12118.9 (4)
C4—C3—C2119.3 (5)C10—C11—H11120.6
C4—C3—H3120.3C12—C11—H11120.6
C2—C3—H3120.3C13—C12—C11122.5 (4)
C3—C4—C5120.5 (5)C13—C12—N3118.9 (4)
C3—C4—H4119.8C11—C12—N3118.5 (4)
C5—C4—H4119.8C12—C13—C14117.8 (4)
C6—C5—C4120.8 (4)C12—C13—H13121.1
C6—C5—H5119.6C14—C13—H13121.1
C4—C5—H5119.6C15—C14—C13120.8 (4)
C1—C6—C5117.9 (4)C15—C14—H14119.6
C1—C6—C7120.6 (5)C13—C14—H14119.6
C5—C6—C7121.6 (5)C14—C15—C10120.2 (4)
C6—C7—S1106.9 (3)C14—C15—H15119.9
C6—C7—H7A113 (2)C10—C15—H15119.9
S1—C7—H7A104 (2)C8—N1—N2119.6 (4)
C6—C7—H7B116 (3)C8—N1—H1A121 (2)
S1—C7—H7B104 (3)N2—N1—H1A119 (2)
H7A—C7—H7B113 (4)C9—N2—N1116.5 (4)
N1—C8—S2120.9 (3)O1—N3—O2124.9 (5)
N1—C8—S1114.5 (3)O1—N3—C12117.6 (4)
S2—C8—S1124.6 (3)O2—N3—C12117.5 (5)
N2—C9—C10120.9 (4)C8—S1—C7102.0 (2)
C6—C1—C2—C30.8 (8)N3—C12—C13—C14179.9 (4)
C1—C2—C3—C4−0.1 (8)C12—C13—C14—C150.1 (7)
C2—C3—C4—C5−1.0 (8)C13—C14—C15—C10−0.4 (6)
C3—C4—C5—C61.4 (8)C11—C10—C15—C141.7 (6)
C2—C1—C6—C5−0.4 (7)C9—C10—C15—C14−178.3 (3)
C2—C1—C6—C7178.1 (4)S2—C8—N1—N2177.2 (2)
C4—C5—C6—C1−0.7 (7)S1—C8—N1—N2−2.9 (4)
C4—C5—C6—C7−179.2 (4)C10—C9—N2—N1177.3 (3)
C1—C6—C7—S196.1 (5)C8—N1—N2—C9178.3 (3)
C5—C6—C7—S1−85.4 (5)C13—C12—N3—O1174.2 (4)
N2—C9—C10—C11179.7 (3)C11—C12—N3—O1−4.7 (6)
N2—C9—C10—C15−0.3 (5)C13—C12—N3—O2−6.3 (6)
C15—C10—C11—C12−2.8 (5)C11—C12—N3—O2174.8 (4)
C9—C10—C11—C12177.2 (3)N1—C8—S1—C7−177.5 (3)
C10—C11—C12—C132.6 (6)S2—C8—S1—C72.4 (3)
C10—C11—C12—N3−178.5 (3)C6—C7—S1—C8173.1 (4)
C11—C12—C13—C14−1.3 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1A···S2i0.93 (3)2.45 (4)3.365 (4)170 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯S2i 0.93 (3)2.45 (4)3.365 (4)170 (3)

Symmetry code: (i) .

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