Literature DB >> 21578791

An ortho-rhom-bic polymorph of 5-[(4-methyl-phen-yl)diazen-yl]salicylaldehyde.

Tushar S Basu Baul, Sajal Kundu, Hadi D Arman, Edward R T Tiekink.   

Abstract

The title compound, C(14)H(12)N(2)O(2), is an ortho-rhom-bic polymorph of the previously reported monoclinic form [Bakir et al. (2005 ▶). Acta Cryst. E61, o1611-o1613]. The dihedral angle between the aromatic rings is 4.32 (13)°. The mol-ecular structures of the two polymorphs, including short intra-molecular O-H⋯O hydrogen bonds between the the hydr-oxy and keto groups, are quite similar but their crystal packings are distinct. Unlike the monoclinic form, in which centrosymmetrically related hydr-oxy and keto groups form {⋯H⋯O}(2) synthons via weak O-H⋯O contacts, leading to dimeric aggregates, in the ortho-rhom-bic form, the hydrogen bonding between these groups leads to the formation of supra-molecular chains orientated along the a axis.

Entities:  

Year:  2009        PMID: 21578791      PMCID: PMC2971774          DOI: 10.1107/S1600536809046868

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the monoclinic polymorph, see: Bakir et al. (2005 ▶). For background and motivation for the synthesis of the title compound, see: Basu Baul et al. (2005 ▶). For the synthesis, see: Sarma et al. (1993 ▶).

Experimental

Crystal data

C14H12N2O2 M = 240.26 Orthorhombic, a = 6.016 (4) Å b = 14.299 (9) Å c = 26.878 (17) Å V = 2312 (3) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 98 K 0.25 × 0.18 × 0.15 mm

Data collection

Rigaku Saturn724 diffractometer Absorption correction: none 12587 measured reflections 2032 independent reflections 1774 reflections with I > 2σ(I) R int = 0.082

Refinement

R[F 2 > 2σ(F 2)] = 0.081 wR(F 2) = 0.208 S = 1.14 2032 reflections 167 parameters 1 restraint H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.32 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809046868/hb5215sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809046868/hb5215Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N2O2F(000) = 1008
Mr = 240.26Dx = 1.380 Mg m3
Orthorhombic, PbnaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2bCell parameters from 8423 reflections
a = 6.016 (4) Åθ = 3.0–40.5°
b = 14.299 (9) ŵ = 0.09 mm1
c = 26.878 (17) ÅT = 98 K
V = 2312 (3) Å3Prism, orange
Z = 80.25 × 0.18 × 0.15 mm
Rigaku Saturn724 diffractometer1774 reflections with I > 2σ(I)
Radiation source: sealed tubeRint = 0.082
graphiteθmax = 25.0°, θmin = 2.9°
Detector resolution: 28.5714 pixels mm-1h = −5→7
ω scansk = −17→17
12587 measured reflectionsl = −31→31
2032 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.081Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.208H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0971P)2 + 2.61P] where P = (Fo2 + 2Fc2)/3
2032 reflections(Δ/σ)max < 0.001
167 parametersΔρmax = 0.40 e Å3
1 restraintΔρmin = −0.32 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.5504 (3)0.03566 (15)0.16786 (7)0.0290 (5)
H1O0.49570.04110.19650.043*
O20.2044 (3)0.07693 (15)0.22794 (7)0.0340 (6)
N1−0.0156 (4)0.13491 (16)0.01161 (7)0.0245 (6)
N20.0617 (4)0.12120 (16)−0.03149 (8)0.0251 (6)
C10.4095 (4)0.0603 (2)0.13084 (9)0.0248 (6)
C20.1931 (4)0.09462 (19)0.13980 (9)0.0242 (6)
C30.0583 (4)0.12043 (19)0.09890 (9)0.0239 (6)
H3−0.08640.14460.10470.029*
C40.1341 (4)0.11101 (18)0.05081 (9)0.0226 (6)
C50.3522 (5)0.07589 (19)0.04248 (9)0.0250 (6)
H50.40580.06980.00940.030*
C60.4862 (4)0.0508 (2)0.08146 (9)0.0252 (6)
H60.63090.02690.07530.030*
C70.1029 (5)0.1000 (2)0.18997 (10)0.0285 (7)
H7−0.04440.12280.19380.034*
C8−0.0859 (4)0.14457 (19)−0.07115 (9)0.0239 (6)
C9−0.0071 (5)0.12717 (19)−0.11890 (9)0.0263 (7)
H90.13670.1010−0.12340.032*
C10−0.1380 (5)0.1479 (2)−0.16010 (10)0.0276 (7)
H10−0.08240.1359−0.19260.033*
C11−0.3501 (5)0.18602 (19)−0.15435 (9)0.0265 (7)
C12−0.4272 (5)0.20340 (19)−0.10605 (9)0.0262 (6)
H12−0.57090.2297−0.10150.031*
C13−0.2985 (5)0.18306 (19)−0.06474 (10)0.0256 (6)
H13−0.35370.1951−0.03230.031*
C14−0.4928 (5)0.2058 (2)−0.19935 (10)0.0341 (7)
H14A−0.44100.2631−0.21560.051*
H14B−0.64770.2137−0.18890.051*
H14C−0.48230.1533−0.22270.051*
U11U22U33U12U13U23
O10.0230 (11)0.0436 (13)0.0203 (10)0.0040 (9)−0.0026 (7)−0.0010 (8)
O20.0260 (11)0.0533 (14)0.0227 (10)0.0007 (9)−0.0016 (8)0.0003 (9)
N10.0246 (12)0.0289 (13)0.0202 (12)0.0002 (10)−0.0018 (9)0.0010 (9)
N20.0238 (12)0.0293 (13)0.0221 (12)−0.0007 (10)−0.0029 (10)0.0001 (9)
C10.0214 (14)0.0306 (15)0.0224 (13)−0.0030 (11)−0.0023 (10)−0.0018 (11)
C20.0223 (13)0.0280 (15)0.0222 (13)−0.0001 (11)0.0021 (11)−0.0006 (10)
C30.0197 (13)0.0282 (14)0.0239 (14)0.0017 (11)−0.0011 (11)−0.0012 (10)
C40.0212 (14)0.0248 (14)0.0217 (13)−0.0024 (10)−0.0033 (11)0.0005 (10)
C50.0242 (14)0.0306 (15)0.0203 (12)−0.0003 (11)0.0014 (11)−0.0021 (11)
C60.0191 (13)0.0312 (15)0.0252 (13)0.0002 (11)0.0008 (11)−0.0021 (11)
C70.0240 (14)0.0362 (16)0.0255 (14)0.0008 (12)0.0011 (12)−0.0004 (11)
C80.0231 (14)0.0267 (15)0.0219 (13)−0.0015 (11)−0.0026 (11)0.0001 (10)
C90.0241 (14)0.0298 (15)0.0251 (14)−0.0025 (11)−0.0012 (11)0.0007 (11)
C100.0273 (14)0.0350 (16)0.0204 (13)−0.0023 (12)0.0020 (11)−0.0014 (11)
C110.0279 (15)0.0258 (15)0.0258 (14)−0.0033 (11)−0.0034 (12)0.0009 (11)
C120.0223 (14)0.0277 (15)0.0285 (14)−0.0005 (11)−0.0004 (11)0.0007 (11)
C130.0278 (15)0.0256 (15)0.0234 (13)−0.0016 (11)0.0002 (11)0.0009 (10)
C140.0369 (16)0.0407 (18)0.0248 (14)0.0037 (14)−0.0051 (12)0.0033 (12)
O1—C11.353 (3)C7—H70.9500
O1—H1O0.8400C8—C91.391 (4)
O2—C71.234 (3)C8—C131.403 (4)
N1—N21.264 (3)C9—C101.391 (4)
N1—C41.428 (3)C9—H90.9500
N2—C81.427 (3)C10—C111.396 (4)
C1—C61.411 (4)C10—H100.9500
C1—C21.413 (4)C11—C121.401 (4)
C2—C31.415 (4)C11—C141.510 (4)
C2—C71.455 (4)C12—C131.385 (4)
C3—C41.377 (4)C12—H120.9500
C3—H30.9500C13—H130.9500
C4—C51.423 (4)C14—H14A0.9800
C5—C61.370 (4)C14—H14B0.9800
C5—H50.9500C14—H14C0.9800
C6—H60.9500
C1—O1—H1O113.8C9—C8—C13119.6 (2)
N2—N1—C4114.0 (2)C9—C8—N2115.8 (2)
N1—N2—C8114.8 (2)C13—C8—N2124.6 (2)
O1—C1—C6117.5 (2)C8—C9—C10120.2 (3)
O1—C1—C2122.8 (2)C8—C9—H9119.9
C6—C1—C2119.7 (2)C10—C9—H9119.9
C1—C2—C3119.1 (2)C9—C10—C11120.8 (2)
C1—C2—C7121.3 (2)C9—C10—H10119.6
C3—C2—C7119.5 (2)C11—C10—H10119.6
C4—C3—C2120.9 (2)C10—C11—C12118.3 (2)
C4—C3—H3119.5C10—C11—C14120.3 (2)
C2—C3—H3119.5C12—C11—C14121.4 (3)
C3—C4—C5119.2 (2)C13—C12—C11121.4 (3)
C3—C4—N1117.4 (2)C13—C12—H12119.3
C5—C4—N1123.4 (2)C11—C12—H12119.3
C6—C5—C4121.0 (2)C12—C13—C8119.6 (2)
C6—C5—H5119.5C12—C13—H13120.2
C4—C5—H5119.5C8—C13—H13120.2
C5—C6—C1120.1 (2)C11—C14—H14A109.5
C5—C6—H6119.9C11—C14—H14B109.5
C1—C6—H6119.9H14A—C14—H14B109.5
O2—C7—C2124.6 (3)C11—C14—H14C109.5
O2—C7—H7117.7H14A—C14—H14C109.5
C2—C7—H7117.7H14B—C14—H14C109.5
C4—N1—N2—C8179.9 (2)C2—C1—C6—C50.8 (4)
O1—C1—C2—C3178.8 (2)C1—C2—C7—O20.9 (5)
C6—C1—C2—C3−1.1 (4)C3—C2—C7—O2178.1 (3)
O1—C1—C2—C7−4.0 (4)N1—N2—C8—C9−178.0 (2)
C6—C1—C2—C7176.1 (3)N1—N2—C8—C132.2 (4)
C1—C2—C3—C41.1 (4)C13—C8—C9—C100.1 (4)
C7—C2—C3—C4−176.2 (3)N2—C8—C9—C10−179.8 (2)
C2—C3—C4—C5−0.8 (4)C8—C9—C10—C11−0.2 (4)
C2—C3—C4—N1177.4 (2)C9—C10—C11—C120.3 (4)
N2—N1—C4—C3−177.4 (2)C9—C10—C11—C14−178.4 (3)
N2—N1—C4—C50.7 (4)C10—C11—C12—C13−0.4 (4)
C3—C4—C5—C60.6 (4)C14—C11—C12—C13178.3 (3)
N1—C4—C5—C6−177.6 (3)C11—C12—C13—C80.2 (4)
C4—C5—C6—C1−0.6 (4)C9—C8—C13—C12−0.1 (4)
O1—C1—C6—C5−179.0 (2)N2—C8—C13—C12179.7 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1o···O20.842.012.700 (3)139
O1—H1o···O2i0.842.443.008 (3)125
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1o⋯O20.842.012.700 (3)139
O1—H1o⋯O2i 0.842.443.008 (3)125

Symmetry code: (i) .

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