| Literature DB >> 21578786 |
Hong-Bo Hou1, Yi-Ming Liu, Luan-Fang Yang.
Abstract
In the title mol-ecule, C(9)H(8)N(2)O(2), the dihedral angle between the pyridine and the pyrrolidine rings is 64.58 (12)°. In the crystal structure, weak C-H⋯π-electron ring inter-actions stabilize the packing.Entities:
Year: 2009 PMID: 21578786 PMCID: PMC2972032 DOI: 10.1107/S1600536809046522
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H8N2O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 852 reflections |
| θ = 2.5–25.0° | |
| µ = 0.10 mm−1 | |
| Block, colourless | |
| 0.25 × 0.21 × 0.17 mm |
| Bruker SMART CCD area-detector diffractometer | 852 independent reflections |
| Radiation source: fine-focus sealed tube | 672 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 3927 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 852 reflections | Δρmax = 0.11 e Å−3 |
| 119 parameters | Δρmin = −0.10 e Å−3 |
| 1 restraint | Extinction correction: |
| 32 constraints | Extinction coefficient: 0.128 (8) |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.46710 (19) | 0.76727 (18) | 0.7705 (4) | 0.0421 (6) | |
| C2 | 0.5641 (2) | 0.7232 (2) | 0.8551 (4) | 0.0576 (8) | |
| H2 | 0.5847 | 0.7545 | 0.9764 | 0.069* | |
| C3 | 0.5975 (2) | 0.5948 (2) | 0.5932 (5) | 0.0653 (9) | |
| H3 | 0.6408 | 0.5352 | 0.5327 | 0.078* | |
| C4 | 0.5034 (2) | 0.6353 (2) | 0.4968 (4) | 0.0661 (8) | |
| H4 | 0.4853 | 0.6040 | 0.3742 | 0.079* | |
| C5 | 0.4364 (2) | 0.7235 (2) | 0.5857 (5) | 0.0563 (8) | |
| H5 | 0.3731 | 0.7523 | 0.5240 | 0.068* | |
| C6 | 0.34810 (18) | 0.8409 (2) | 1.0491 (4) | 0.0508 (7) | |
| C7 | 0.29704 (19) | 0.9616 (2) | 1.1138 (4) | 0.0578 (8) | |
| H7A | 0.3299 | 0.9897 | 1.2353 | 0.069* | |
| H7B | 0.2183 | 0.9524 | 1.1328 | 0.069* | |
| C8 | 0.3213 (2) | 1.0532 (2) | 0.9462 (5) | 0.0565 (8) | |
| H8A | 0.2534 | 1.0823 | 0.8874 | 0.068* | |
| H8B | 0.3625 | 1.1237 | 0.9943 | 0.068* | |
| C9 | 0.38857 (18) | 0.9809 (2) | 0.8001 (5) | 0.0505 (7) | |
| N1 | 0.62967 (18) | 0.63755 (19) | 0.7709 (4) | 0.0668 (7) | |
| N2 | 0.40243 (14) | 0.86060 (15) | 0.8703 (3) | 0.0417 (5) | |
| O1 | 0.34353 (16) | 0.74092 (18) | 1.1328 (4) | 0.0784 (7) | |
| O2 | 0.42619 (16) | 1.01652 (17) | 0.6419 (4) | 0.0797 (7) |
| C1 | 0.0410 (13) | 0.0403 (13) | 0.0449 (17) | −0.0047 (10) | −0.0005 (13) | 0.0029 (13) |
| C2 | 0.0566 (15) | 0.0605 (16) | 0.056 (2) | 0.0107 (12) | −0.0101 (15) | −0.0018 (14) |
| C3 | 0.0721 (19) | 0.0532 (16) | 0.071 (2) | 0.0082 (12) | 0.0108 (19) | −0.0073 (16) |
| C4 | 0.0749 (18) | 0.0639 (17) | 0.060 (2) | −0.0014 (15) | −0.0085 (17) | −0.0176 (14) |
| C5 | 0.0496 (15) | 0.0607 (17) | 0.059 (2) | −0.0035 (12) | −0.0103 (14) | −0.0036 (15) |
| C6 | 0.0493 (14) | 0.0581 (16) | 0.0450 (19) | −0.0032 (13) | −0.0024 (13) | 0.0052 (15) |
| C7 | 0.0484 (13) | 0.0743 (17) | 0.051 (2) | −0.0007 (13) | 0.0042 (16) | −0.0066 (15) |
| C8 | 0.0445 (14) | 0.0513 (15) | 0.074 (2) | 0.0018 (12) | 0.0013 (14) | −0.0083 (16) |
| C9 | 0.0395 (12) | 0.0501 (15) | 0.062 (2) | −0.0033 (10) | 0.0001 (14) | 0.0065 (15) |
| N1 | 0.0668 (15) | 0.0652 (15) | 0.0684 (19) | 0.0207 (11) | −0.0052 (15) | −0.0076 (15) |
| N2 | 0.0380 (10) | 0.0427 (12) | 0.0445 (14) | −0.0003 (8) | −0.0008 (10) | 0.0044 (10) |
| O1 | 0.0992 (15) | 0.0735 (13) | 0.0624 (15) | 0.0008 (11) | 0.0115 (14) | 0.0195 (11) |
| O2 | 0.0846 (13) | 0.0681 (13) | 0.0864 (17) | 0.0147 (10) | 0.0343 (13) | 0.0302 (13) |
| C1—C2 | 1.396 (4) | C6—O1 | 1.226 (3) |
| C1—C5 | 1.399 (4) | C6—N2 | 1.404 (3) |
| C1—N2 | 1.450 (3) | C6—C7 | 1.514 (4) |
| C2—N1 | 1.351 (3) | C7—C8 | 1.544 (4) |
| C2—H2 | 0.9300 | C7—H7A | 0.9700 |
| C3—N1 | 1.356 (4) | C7—H7B | 0.9700 |
| C3—C4 | 1.390 (4) | C8—C9 | 1.509 (4) |
| C3—H3 | 0.9300 | C8—H8A | 0.9700 |
| C4—C5 | 1.393 (4) | C8—H8B | 0.9700 |
| C4—H4 | 0.9300 | C9—O2 | 1.235 (4) |
| C5—H5 | 0.9300 | C9—N2 | 1.400 (3) |
| C2—C1—C5 | 118.8 (2) | C6—C7—H7A | 110.7 |
| C2—C1—N2 | 120.0 (3) | C8—C7—H7A | 110.7 |
| C5—C1—N2 | 121.1 (2) | C6—C7—H7B | 110.7 |
| N1—C2—C1 | 123.8 (3) | C8—C7—H7B | 110.7 |
| N1—C2—H2 | 118.1 | H7A—C7—H7B | 108.8 |
| C1—C2—H2 | 118.1 | C9—C8—C7 | 105.1 (2) |
| N1—C3—C4 | 123.6 (3) | C9—C8—H8A | 110.7 |
| N1—C3—H3 | 118.2 | C7—C8—H8A | 110.7 |
| C4—C3—H3 | 118.2 | C9—C8—H8B | 110.7 |
| C3—C4—C5 | 119.3 (3) | C7—C8—H8B | 110.7 |
| C3—C4—H4 | 120.4 | H8A—C8—H8B | 108.8 |
| C5—C4—H4 | 120.4 | O2—C9—N2 | 123.1 (2) |
| C4—C5—C1 | 118.1 (3) | O2—C9—C8 | 128.1 (2) |
| C4—C5—H5 | 121.0 | N2—C9—C8 | 108.8 (3) |
| C1—C5—H5 | 121.0 | C2—N1—C3 | 116.5 (2) |
| O1—C6—N2 | 124.2 (2) | C9—N2—C6 | 112.6 (2) |
| O1—C6—C7 | 127.5 (3) | C9—N2—C1 | 123.6 (2) |
| N2—C6—C7 | 108.3 (2) | C6—N2—C1 | 123.8 (2) |
| C6—C7—C8 | 105.1 (2) |
| H··· | ||||
| C8—H8B···Cgi | 0.97 | 2.78 | 3.742 (6) | 172 |
Hydrogen-bond geometry (Å)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C8—H8 | 0.97 | 2.78 | 3.742 (6) | 172 |
Symmetry code: (i) . Cg is the centroid of the N1,C1–C5 ring.