Literature DB >> 21578743

5,15-Bis(3,5-di-tert-butyl-phen-yl)-10,20-bis-(phenyl-ethyn-yl)porphyrin.

Hee Jung Kim1, Atul P Singh, Hee-Joon Kim.   

Abstract

In the centrosymmetric title compound, C(64)H(62)N(4), the two phenyl-ethynyl groups lie at diagonal meso positions. The 24-membered porphyrin has in-plane distortion with respect to the mean plane of the macrocycle and two intra-ring bifurcated N-H⋯(N,N) hydrogen bonds occur. The dihedral angles between the phenyl rings in the phenyl-ethynyl group and the 3,5-bis-(tert-but-yl)phenyl group with respect to the mean plane of the porphyrin are 17.2 (2) and 59.2 (3)°. The tert-butyl groups are disordered over two sets of sites in a 0.661 (13):0.339 (13) ratio.

Entities:  

Year:  2009        PMID: 21578743      PMCID: PMC2972159          DOI: 10.1107/S1600536809045954

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to porphyrin structures and electronic properties, see: Anderson et al. (1994 ▶, 1998 ▶); Fujita et al. (1995 ▶); Henari et al. (1997 ▶); Huuskonen et al. (1998 ▶); LeCours et al. (1996 ▶); Screen et al. (2002 ▶); Seo et al. (2008 ▶); Silvers & Tulinsky (1967 ▶).

Experimental

Crystal data

C64H62N4 M = 887.18 Triclinic, a = 9.9598 (19) Å b = 10.496 (2) Å c = 13.925 (3) Å α = 86.236 (4)° β = 80.266 (4)° γ = 82.765 (4)° V = 1421.8 (5) Å3 Z = 1 Mo Kα radiation μ = 0.06 mm−1 T = 213 K 0.45 × 0.10 × 0.05 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.974, T max = 0.997 6144 measured reflections 4136 independent reflections 2068 reflections with I > 2σ(I) R int = 0.101 θmax = 23.5°

Refinement

R[F 2 > 2σ(F 2)] = 0.107 wR(F 2) = 0.315 S = 0.99 4136 reflections 363 parameters 193 restraints H-atom parameters constrained Δρmax = 1.13 e Å−3 Δρmin = −0.30 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045954/hb5134sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045954/hb5134Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C64H62N4Z = 1
Mr = 887.18F(000) = 474
Triclinic, P1Dx = 1.036 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.9598 (19) ÅCell parameters from 4136 reflections
b = 10.496 (2) Åθ = 2.0–23.5°
c = 13.925 (3) ŵ = 0.06 mm1
α = 86.236 (4)°T = 213 K
β = 80.266 (4)°Needle, purple
γ = 82.765 (4)°0.45 × 0.10 × 0.05 mm
V = 1421.8 (5) Å3
Bruker SMART CCD diffractometer4136 independent reflections
Radiation source: fine-focus sealed tube2068 reflections with I > 2σ(I)
graphiteRint = 0.101
ω scansθmax = 23.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −8→11
Tmin = 0.974, Tmax = 0.997k = −11→11
6144 measured reflectionsl = −11→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.107Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.315H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.1906P)2] where P = (Fo2 + 2Fc2)/3
4136 reflections(Δ/σ)max < 0.001
363 parametersΔρmax = 1.13 e Å3
193 restraintsΔρmin = −0.30 e Å3
xyzUiso*/UeqOcc. (<1)
N10.4997 (4)0.8413 (3)0.5981 (3)0.0445 (11)
H1A0.49400.91160.56160.053*
N20.3805 (4)0.9196 (3)0.4184 (3)0.0481 (11)
C10.5695 (5)0.8204 (4)0.6753 (3)0.0429 (13)
C20.5537 (6)0.6929 (5)0.7151 (4)0.0529 (14)
H20.59070.65300.76890.063*
C30.4771 (6)0.6413 (5)0.6622 (4)0.0600 (16)
H30.45110.55780.67180.072*
C40.4409 (5)0.7342 (4)0.5880 (4)0.0449 (13)
C50.3646 (5)0.7155 (4)0.5160 (4)0.0482 (13)
C60.3377 (5)0.8019 (5)0.4380 (4)0.0468 (13)
C70.2576 (6)0.7764 (5)0.3646 (4)0.0577 (15)
H70.21540.70200.36080.069*
C80.2563 (6)0.8818 (5)0.3030 (4)0.0564 (15)
H80.21370.89290.24720.068*
C90.3299 (5)0.9725 (4)0.3367 (3)0.0409 (12)
C100.3527 (5)1.0946 (5)0.2919 (3)0.0470 (13)
C110.3101 (6)0.5928 (5)0.5201 (4)0.0557 (14)
C120.2674 (6)0.4937 (5)0.5260 (4)0.0606 (16)
C130.2183 (6)0.3674 (5)0.5331 (4)0.0584 (15)
C140.2721 (6)0.2699 (5)0.5915 (4)0.0605 (15)
H140.34100.28490.62650.073*
C150.1152 (6)0.3433 (5)0.4811 (4)0.0626 (16)
H150.07810.40720.43930.075*
C160.2265 (7)0.1512 (5)0.5990 (5)0.0712 (18)
H160.26550.08500.63810.085*
C170.0704 (7)0.2243 (6)0.4930 (4)0.0760 (19)
H17−0.00070.20830.46050.091*
C180.1249 (8)0.1287 (6)0.5501 (5)0.0757 (19)
H180.09290.04750.55580.091*
C190.2853 (6)1.1365 (5)0.2057 (4)0.0511 (14)
C200.1439 (6)1.1470 (5)0.2137 (4)0.0636 (16)
H200.09141.12830.27450.076*
C210.3627 (6)1.1657 (4)0.1160 (4)0.0541 (14)
H210.45861.15960.11040.065*
C220.0761 (6)1.1849 (6)0.1337 (4)0.0704 (17)
C230.3015 (6)1.2037 (5)0.0341 (4)0.0612 (15)
C240.1597 (6)1.2114 (6)0.0466 (4)0.0714 (18)
H240.11721.2366−0.00810.086*
C25−0.0782 (7)1.2010 (8)0.1463 (5)0.090 (2)
C26A−0.1491 (10)1.1396 (11)0.2354 (9)0.077 (3)0.661 (13)
H26A−0.10291.05410.24590.115*0.661 (13)
H26B−0.24331.13370.22830.115*0.661 (13)
H26C−0.14791.19070.29080.115*0.661 (13)
C27A−0.1397 (14)1.3240 (12)0.1232 (13)0.118 (5)0.661 (13)
H27A−0.23851.32400.13240.178*0.661 (13)
H27B−0.10631.34810.05580.178*0.661 (13)
H27C−0.11711.38520.16550.178*0.661 (13)
C28A−0.1218 (15)1.1113 (16)0.0638 (12)0.147 (6)0.661 (13)
H28A−0.08451.02250.07390.221*0.661 (13)
H28B−0.08521.1424−0.00130.221*0.661 (13)
H28C−0.22091.11720.07110.221*0.661 (13)
C26B−0.125 (4)1.110 (3)0.176 (3)0.156 (15)0.339 (13)
H26D−0.22351.12460.17890.234*0.339 (13)
H26E−0.10411.08890.24160.234*0.339 (13)
H26F−0.08671.04000.13440.234*0.339 (13)
C27B−0.121 (3)1.3362 (18)0.2041 (19)0.109 (9)0.339 (13)
H27D−0.07531.40430.16680.164*0.339 (13)
H27E−0.09331.32490.26790.164*0.339 (13)
H27F−0.21951.35900.21150.164*0.339 (13)
C28B−0.117 (3)1.263 (3)0.048 (2)0.153 (12)0.339 (13)
H28D−0.05261.32270.02030.229*0.339 (13)
H28E−0.20911.30880.05980.229*0.339 (13)
H28F−0.11471.19620.00250.229*0.339 (13)
C290.3836 (7)1.2398 (6)−0.0623 (4)0.0763 (18)
C30A0.495 (6)1.131 (5)−0.084 (4)0.094 (9)0.121 (8)
H30A0.50501.0805−0.02430.141*0.121 (8)
H30B0.58011.1652−0.11020.141*0.121 (8)
H30C0.47091.0776−0.13110.141*0.121 (8)
C31A0.294 (5)1.274 (6)−0.138 (4)0.089 (10)0.121 (8)
H31A0.35091.2927−0.20010.134*0.121 (8)
H31B0.22991.3483−0.11930.134*0.121 (8)
H31C0.24461.2018−0.14460.134*0.121 (8)
C32A0.445 (7)1.358 (5)−0.035 (5)0.110 (10)0.121 (8)
H32A0.51691.32990.00390.165*0.121 (8)
H32B0.37401.41500.00260.165*0.121 (8)
H32C0.48411.4041−0.09380.165*0.121 (8)
C30B0.3606 (9)1.1477 (8)−0.1410 (5)0.092 (3)0.879 (8)
H30D0.41341.1703−0.20350.138*0.879 (8)
H30E0.26401.1563−0.14630.138*0.879 (8)
H30F0.39031.0595−0.12170.138*0.879 (8)
C31B0.3428 (10)1.3783 (8)−0.0936 (6)0.109 (3)0.879 (8)
H31D0.39791.3990−0.15570.163*0.879 (8)
H31E0.35791.4346−0.04490.163*0.879 (8)
H31F0.24661.3899−0.10030.163*0.879 (8)
C32B0.5416 (8)1.2160 (9)−0.0616 (5)0.086 (2)0.879 (8)
H32D0.59021.2415−0.12490.130*0.879 (8)
H32E0.56801.1255−0.04750.130*0.879 (8)
H32F0.56451.2664−0.01200.130*0.879 (8)
U11U22U33U12U13U23
N10.048 (3)0.031 (2)0.050 (3)−0.0016 (18)−0.004 (2)0.0123 (18)
N20.053 (3)0.039 (2)0.050 (3)−0.0027 (19)−0.002 (2)0.0033 (19)
C10.043 (3)0.033 (3)0.046 (3)0.006 (2)−0.001 (2)0.012 (2)
C20.057 (4)0.043 (3)0.059 (3)−0.008 (3)−0.014 (3)0.014 (3)
C30.058 (4)0.047 (3)0.071 (4)−0.009 (3)−0.006 (3)0.026 (3)
C40.050 (3)0.032 (3)0.048 (3)−0.005 (2)0.005 (3)0.006 (2)
C50.049 (3)0.041 (3)0.051 (3)−0.007 (2)−0.002 (3)0.006 (2)
C60.035 (3)0.050 (3)0.051 (3)−0.001 (2)0.001 (2)−0.002 (2)
C70.061 (4)0.055 (3)0.059 (4)−0.021 (3)−0.006 (3)0.004 (3)
C80.061 (4)0.066 (4)0.043 (3)−0.014 (3)−0.006 (3)0.000 (3)
C90.035 (3)0.039 (3)0.046 (3)0.000 (2)−0.004 (2)0.001 (2)
C100.043 (3)0.050 (3)0.043 (3)0.003 (2)0.000 (2)−0.001 (2)
C110.059 (4)0.046 (3)0.060 (4)−0.014 (3)−0.004 (3)0.011 (3)
C120.071 (4)0.046 (3)0.062 (4)−0.012 (3)−0.001 (3)0.008 (3)
C130.056 (4)0.043 (3)0.071 (4)−0.009 (3)0.007 (3)−0.008 (3)
C140.055 (4)0.049 (3)0.075 (4)−0.007 (3)−0.004 (3)−0.001 (3)
C150.071 (4)0.054 (3)0.059 (4)−0.006 (3)−0.004 (3)0.000 (3)
C160.065 (4)0.044 (3)0.093 (5)0.001 (3)0.009 (4)0.011 (3)
C170.090 (5)0.084 (5)0.058 (4)−0.038 (4)0.000 (3)−0.014 (3)
C180.080 (5)0.055 (4)0.085 (5)−0.020 (3)0.016 (4)−0.008 (4)
C190.053 (4)0.052 (3)0.046 (3)0.003 (3)−0.008 (3)−0.005 (2)
C200.049 (4)0.076 (4)0.057 (4)0.011 (3)0.004 (3)−0.001 (3)
C210.054 (4)0.053 (3)0.049 (3)0.007 (3)−0.002 (3)−0.003 (2)
C220.057 (4)0.086 (4)0.061 (4)0.020 (3)−0.010 (3)0.000 (3)
C230.062 (4)0.062 (3)0.057 (4)0.011 (3)−0.018 (3)0.004 (3)
C240.063 (5)0.095 (4)0.050 (4)0.024 (3)−0.015 (3)0.000 (3)
C250.054 (5)0.121 (6)0.086 (5)0.029 (4)−0.020 (4)0.009 (4)
C26A0.038 (5)0.093 (6)0.096 (7)−0.002 (4)−0.014 (5)0.018 (5)
C27A0.097 (8)0.117 (8)0.135 (9)0.002 (6)−0.020 (7)0.011 (7)
C28A0.109 (9)0.171 (10)0.167 (10)−0.024 (7)−0.031 (7)−0.014 (8)
C26B0.149 (17)0.162 (17)0.157 (17)−0.013 (10)−0.031 (10)0.002 (10)
C27B0.099 (11)0.111 (11)0.114 (12)−0.006 (8)−0.015 (9)0.000 (9)
C28B0.147 (15)0.165 (15)0.148 (14)−0.006 (9)−0.037 (9)−0.006 (9)
C290.081 (4)0.089 (4)0.048 (3)0.016 (3)−0.002 (3)0.004 (3)
C30A0.089 (12)0.096 (11)0.092 (13)0.003 (8)−0.010 (9)0.002 (9)
C31A0.087 (12)0.095 (14)0.085 (12)−0.007 (8)−0.015 (9)0.005 (9)
C32A0.112 (15)0.112 (12)0.106 (15)−0.011 (9)−0.021 (10)−0.012 (10)
C30B0.083 (5)0.133 (6)0.052 (4)0.007 (4)0.000 (3)−0.010 (4)
C31B0.114 (6)0.108 (5)0.089 (5)−0.002 (4)0.002 (5)0.039 (4)
C32B0.083 (5)0.122 (6)0.045 (4)0.001 (4)0.003 (3)0.009 (4)
N1—C41.357 (6)C29—C30A1.49 (4)
N1—C11.367 (6)C29—C31A1.49 (4)
N2—C61.354 (6)C29—C31B1.515 (9)
N2—C91.378 (6)C29—C30B1.570 (10)
C1—C10i1.397 (7)C29—C32B1.563 (10)
C1—C21.431 (6)C29—C32A1.55 (5)
C2—C31.329 (7)N1—H1A0.869 (3)
C3—C41.433 (7)C2—H20.941 (6)
C4—C51.393 (7)C3—H30.940 (5)
C5—C61.407 (7)C8—H80.940 (6)
C5—C111.454 (7)C14—H140.940 (6)
C6—C71.455 (7)C15—H150.940 (5)
C7—C81.355 (7)C16—H160.940 (6)
C8—C91.420 (7)C17—H170.940 (7)
C9—C101.415 (6)C18—H180.941 (7)
C10—C1i1.397 (7)C20—H200.940 (5)
C10—C191.488 (7)C21—H210.939 (6)
C11—C121.164 (7)C24—H240.940 (6)
C12—C131.462 (7)C26A—H26A0.97 (1)
C13—C141.377 (8)C26A—H26B0.97 (1)
C13—C151.409 (8)C26A—H26C0.97 (1)
C14—C161.371 (7)C27A—H27A0.97 (1)
C15—C171.369 (8)C27A—H27B0.97 (2)
C16—C181.364 (9)C27A—H27C0.97 (2)
C17—C181.355 (9)C28A—H28A0.97 (2)
C19—C201.385 (7)C28A—H28B0.97 (2)
C19—C211.390 (7)C28A—H28C0.97 (1)
C20—C221.408 (8)C30A—H30A0.97 (5)
C21—C231.395 (7)C30A—H30B0.97 (6)
C22—C241.383 (8)C30A—H30C0.97 (6)
C22—C251.506 (9)C31A—H31A0.97 (5)
C23—C241.386 (8)C31A—H31B0.96 (5)
C23—C291.502 (8)C31A—H31C0.97 (6)
C25—C26B1.14 (3)C32A—H32A0.97 (7)
C25—C27A1.400 (13)C32A—H32B0.97 (6)
C25—C26A1.473 (12)C32A—H32C0.97 (6)
C25—C28B1.57 (3)N1—H1A0.869 (3)
C25—C27B1.651 (16)C2—H20.941 (6)
C25—C28A1.676 (16)
C4—N1—C1108.7 (4)C28B—C25—C28A59.0 (12)
C6—N2—C9107.9 (4)C27B—C25—C28A143.9 (12)
N1—C1—C10i126.7 (4)C30A—C29—C31A116 (3)
N1—C1—C2107.9 (5)C30A—C29—C23106 (2)
C10i—C1—C2125.4 (5)C31A—C29—C23112 (2)
C3—C2—C1107.4 (5)C30A—C29—C31B142 (2)
C2—C3—C4108.6 (5)C31A—C29—C31B58 (2)
N1—C4—C5126.4 (4)C23—C29—C31B111.3 (5)
N1—C4—C3107.4 (5)C30A—C29—C30B65 (2)
C5—C4—C3126.1 (5)C31A—C29—C30B54 (2)
C4—C5—C6126.8 (4)C23—C29—C30B109.0 (6)
C4—C5—C11116.8 (4)C31B—C29—C30B110.0 (6)
C6—C5—C11116.4 (5)C30A—C29—C32B44 (2)
N2—C6—C5126.7 (5)C31A—C29—C32B136 (2)
N2—C6—C7109.1 (4)C23—C29—C32B112.4 (5)
C5—C6—C7124.2 (5)C31B—C29—C32B110.1 (7)
C8—C7—C6105.9 (5)C30B—C29—C32B103.9 (6)
C7—C8—C9108.7 (5)C30A—C29—C32A110 (3)
N2—C9—C8108.4 (4)C31A—C29—C32A112 (3)
N2—C9—C10125.5 (5)C23—C29—C32A101 (2)
C8—C9—C10126.0 (5)C31B—C29—C32A54 (2)
C1i—C10—C9124.6 (5)C30B—C29—C32A150 (2)
C1i—C10—C19117.9 (4)C32B—C29—C32A66 (2)
C9—C10—C19117.4 (5)C25—C26A—H26A110 (1)
C12—C11—C5178.0 (6)C25—C26A—H26B109 (1)
C11—C12—C13178.2 (6)C25—C26A—H26C109 (1)
C14—C13—C15118.9 (5)H26A—C26A—H26B109 (1)
C14—C13—C12120.2 (6)H26A—C26A—H26C109 (1)
C15—C13—C12120.9 (5)H26B—C26A—H26C109 (1)
C16—C14—C13120.7 (6)C25—C27A—H27A109 (1)
C17—C15—C13118.2 (6)C25—C27A—H27B110 (1)
C18—C16—C14120.3 (6)C25—C27A—H27C109 (1)
C18—C17—C15122.4 (7)H27A—C27A—H27B109 (1)
C17—C18—C16119.4 (6)H27A—C27A—H27C109 (1)
C20—C19—C21118.9 (5)H27B—C27A—H27C109 (1)
C20—C19—C10120.3 (5)C25—C28A—H28A109 (1)
C21—C19—C10120.8 (5)C25—C28A—H28B109 (1)
C19—C20—C22122.2 (5)C25—C28A—H28C109 (1)
C23—C21—C19121.6 (5)H28A—C28A—H28B109 (2)
C24—C22—C20115.8 (6)H28A—C28A—H28C110 (2)
C24—C22—C25123.6 (6)H28B—C28A—H28C109 (2)
C20—C22—C25120.6 (5)C23—C29—C30A106 (2)
C24—C23—C21116.7 (5)C23—C29—C31A111 (2)
C24—C23—C29121.1 (5)C23—C29—C32A101 (2)
C21—C23—C29122.1 (6)C30A—C29—C31A116 (3)
C22—C24—C23124.8 (6)C30A—C29—C32A110 (3)
C26B—C25—C27A131 (2)C31A—C29—C32A112 (3)
C26B—C25—C26A36.7 (19)C29—C30A—H30A109 (5)
C27A—C25—C26A113.9 (9)C29—C30A—H30B109 (5)
C26B—C25—C22113 (2)C29—C30A—H30C109 (5)
C27A—C25—C22115.8 (9)H30A—C30A—H30B110 (5)
C26A—C25—C22115.9 (6)H30A—C30A—H30C110 (5)
C26B—C25—C28B117 (2)H30B—C30A—H30C110 (5)
C27A—C25—C28B48.9 (12)C29—C31A—H31A109 (5)
C26A—C25—C28B136.7 (14)C29—C31A—H31B110 (5)
C22—C25—C28B106.5 (13)C29—C31A—H31C109 (5)
C26B—C25—C27B120 (2)H31A—C31A—H31B110 (5)
C27A—C25—C27B45.0 (9)H31A—C31A—H31C109 (5)
C26A—C25—C27B85.5 (11)H31B—C31A—H31C110 (5)
C22—C25—C27B102.9 (11)C29—C32A—H32A110 (5)
C28B—C25—C27B93.6 (14)C29—C32A—H32B110 (5)
C26B—C25—C28A64 (2)C29—C32A—H32C110 (5)
C27A—C25—C28A102.6 (10)H32A—C32A—H32B109 (6)
C26A—C25—C28A98.7 (9)H32A—C32A—H32C109 (6)
C22—C25—C28A107.1 (7)H32B—C32A—H32C109 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1A···N20.872.442.972 (6)120
N1—H1A···N2i0.872.352.891 (5)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯N20.872.442.972 (6)120
N1—H1A⋯N2i 0.872.352.891 (5)121

Symmetry code: (i) .

  4 in total

1.  Amplified optical nonlinearity in a self-assembled double-strand conjugated porphyrin polymer ladder.

Authors:  Thomas E O Screen; Jonathan R G Thorne; Robert G Denning; David G Bucknall; Harry L Anderson
Journal:  J Am Chem Soc       Date:  2002-08-21       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  The crystal and molecular structure of triclinic tetraphenylporphyrin.

Authors:  S J Silvers; A Tulinsky
Journal:  J Am Chem Soc       Date:  1967-06-21       Impact factor: 15.419

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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