Literature DB >> 21578736

4,4'-[Piperazine-1,4-diylbis(propyl-ene-nitrilo-methyl-idyne)]diphenol.

Ruibo Xu, Xingyou Xu, Xujie Yang, Yuping Huang, Chunmei Xu.   

Abstract

In the title mol-ecule, C(24)H(32)N(4)O(2), the piperazine ring adopts a chair conformation and the dihedral angle between the two benzene rings is 35.4 (1)°. In the crystal structure, inter-molecular O-H⋯N hydrogen bonds link mol-ecules into chains along [001].

Entities:  

Year:  2009        PMID: 21578736      PMCID: PMC2972058          DOI: 10.1107/S1600536809045620

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the properties of piperazine derivatives, see: Keypour et al. (2008 ▶, 2009 ▶); Paital et al. (2009 ▶). For related structures, see: Thirumurugan et al. (1998 ▶); Yogavel et al. (2003 ▶).

Experimental

Crystal data

C24H32N4O2 M = 408.54 Monoclinic, a = 5.9701 (10) Å b = 30.159 (3) Å c = 12.8348 (18) Å β = 97.558 (2)° V = 2290.9 (6) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 298 K 0.17 × 0.15 × 0.11 mm

Data collection

Siemens SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.987, T max = 0.992 5997 measured reflections 2016 independent reflections 1387 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.103 S = 0.96 2016 reflections 271 parameters 2 restraints H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045620/lh2937sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045620/lh2937Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H32N4O2F(000) = 880
Mr = 408.54Dx = 1.185 Mg m3
Monoclinic, CcMo Kα radiation, λ = 0.71073 Å
Hall symbol: C -2ycCell parameters from 1760 reflections
a = 5.9701 (10) Åθ = 2.7–24.9°
b = 30.159 (3) ŵ = 0.08 mm1
c = 12.8348 (18) ÅT = 298 K
β = 97.558 (2)°Lamellate, pink
V = 2290.9 (6) Å30.17 × 0.15 × 0.11 mm
Z = 4
Siemens SMART CCD diffractometer2016 independent reflections
Radiation source: fine-focus sealed tube1387 reflections with I > 2σ(I)
graphiteRint = 0.068
φ and ω scansθmax = 25.0°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −7→6
Tmin = 0.987, Tmax = 0.992k = −30→35
5997 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 0.96w = 1/[σ2(Fo2) + (0.0507P)2] where P = (Fo2 + 2Fc2)/3
2016 reflections(Δ/σ)max < 0.001
271 parametersΔρmax = 0.14 e Å3
2 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.6528 (5)0.39796 (9)0.5395 (2)0.0440 (7)
N20.6327 (5)0.34403 (9)0.7270 (2)0.0450 (7)
N30.6917 (7)0.47133 (10)0.2563 (2)0.0619 (9)
N40.5753 (7)0.26995 (10)1.0120 (2)0.0604 (9)
O11.0094 (5)0.38009 (9)−0.1521 (2)0.0684 (8)
H10.89810.3653−0.17440.103*
O20.2701 (4)0.37289 (8)1.40788 (19)0.0592 (7)
H20.38800.37351.44860.089*
C10.5611 (7)0.41527 (12)0.6330 (3)0.0509 (10)
H1A0.44390.43690.61130.061*
H1B0.68040.43000.67890.061*
C20.4643 (7)0.37801 (12)0.6919 (3)0.0524 (10)
H2A0.40430.39010.75260.063*
H2B0.34030.36440.64670.063*
C30.7284 (7)0.32708 (12)0.6338 (3)0.0510 (10)
H3A0.61110.31220.58710.061*
H3B0.84640.30570.65600.061*
C40.8247 (6)0.36472 (12)0.5762 (3)0.0504 (10)
H4A0.94530.37880.62260.060*
H4B0.88900.35300.51630.060*
C50.7518 (7)0.43362 (13)0.4807 (3)0.0552 (10)
H5A0.82020.42030.42370.066*
H5B0.87120.44790.52730.066*
C60.5862 (8)0.46839 (13)0.4356 (3)0.0628 (11)
H6A0.54900.48730.49200.075*
H6B0.44810.45400.40440.075*
C70.6779 (9)0.49699 (13)0.3524 (3)0.0680 (12)
H7A0.57960.52240.33610.082*
H7B0.82680.50790.37980.082*
C80.8797 (8)0.46994 (12)0.2204 (3)0.0555 (11)
H81.00220.48500.25630.067*
C90.9117 (7)0.44553 (11)0.1246 (3)0.0479 (9)
C101.1116 (7)0.44905 (13)0.0817 (3)0.0608 (10)
H101.22800.46640.11530.073*
C111.1427 (7)0.42709 (14)−0.0112 (3)0.0584 (10)
H111.27740.4304−0.03950.070*
C120.9734 (6)0.40044 (12)−0.0611 (3)0.0471 (9)
C130.7736 (6)0.39566 (12)−0.0171 (3)0.0501 (10)
H130.65920.3775−0.04970.060*
C140.7435 (6)0.41775 (12)0.0751 (3)0.0472 (9)
H140.61000.41400.10410.057*
C150.5266 (7)0.30844 (12)0.7830 (3)0.0566 (10)
H15A0.41590.29330.73320.068*
H15B0.44650.32190.83600.068*
C160.6907 (8)0.27448 (12)0.8355 (3)0.0591 (11)
H16A0.82200.28960.87130.071*
H16B0.74110.25550.78210.071*
C170.5864 (9)0.24597 (14)0.9141 (3)0.0703 (13)
H17A0.43530.23720.88410.084*
H17B0.67590.21930.92860.084*
C180.3869 (7)0.28242 (12)1.0347 (3)0.0530 (10)
H180.25840.27600.98790.064*
C190.3598 (7)0.30661 (11)1.1315 (3)0.0446 (9)
C200.5407 (7)0.31283 (13)1.2093 (3)0.0563 (11)
H200.68200.30191.19940.068*
C210.5156 (7)0.33506 (13)1.3016 (3)0.0566 (10)
H210.63920.33871.35300.068*
C220.3063 (6)0.35184 (11)1.3173 (3)0.0462 (9)
C230.1256 (7)0.34603 (12)1.2404 (3)0.0517 (9)
H23−0.01500.35741.25010.062*
C240.1506 (7)0.32352 (12)1.1488 (3)0.0545 (10)
H240.02600.31961.09800.065*
U11U22U33U12U13U23
N10.0460 (18)0.0507 (17)0.0371 (16)0.0038 (15)0.0126 (15)−0.0067 (14)
N20.0486 (18)0.0493 (17)0.0378 (16)0.0054 (15)0.0086 (14)−0.0041 (14)
N30.086 (3)0.053 (2)0.047 (2)−0.0058 (19)0.0136 (19)−0.0030 (17)
N40.084 (3)0.0542 (19)0.045 (2)0.0001 (19)0.0140 (19)−0.0078 (16)
O10.0580 (18)0.092 (2)0.0577 (17)−0.0007 (15)0.0161 (15)−0.0221 (16)
O20.0517 (17)0.0707 (18)0.0567 (17)0.0012 (14)0.0131 (14)−0.0143 (14)
C10.060 (2)0.054 (2)0.041 (2)0.0106 (19)0.0137 (19)−0.0060 (18)
C20.049 (2)0.067 (2)0.043 (2)0.012 (2)0.0145 (19)−0.0047 (19)
C30.057 (2)0.054 (2)0.043 (2)0.0123 (19)0.0086 (19)−0.0054 (18)
C40.045 (2)0.065 (3)0.042 (2)0.0102 (18)0.0110 (18)−0.0056 (19)
C50.063 (3)0.058 (2)0.046 (2)−0.007 (2)0.014 (2)−0.0035 (19)
C60.083 (3)0.052 (2)0.056 (3)0.003 (2)0.019 (2)−0.002 (2)
C70.105 (4)0.049 (2)0.052 (2)−0.004 (2)0.019 (2)−0.008 (2)
C80.070 (3)0.049 (2)0.047 (2)−0.005 (2)0.004 (2)−0.0016 (18)
C90.055 (2)0.043 (2)0.044 (2)0.0047 (18)0.0010 (19)0.0022 (17)
C100.054 (3)0.069 (3)0.057 (2)−0.009 (2)−0.001 (2)−0.007 (2)
C110.046 (2)0.073 (3)0.056 (2)0.001 (2)0.008 (2)−0.003 (2)
C120.047 (2)0.051 (2)0.042 (2)0.0076 (18)0.0023 (19)0.0014 (19)
C130.052 (2)0.049 (2)0.049 (2)−0.0023 (18)0.003 (2)−0.0043 (18)
C140.049 (2)0.049 (2)0.045 (2)0.0014 (18)0.0081 (18)0.0016 (18)
C150.059 (2)0.064 (2)0.048 (2)−0.008 (2)0.0096 (19)−0.005 (2)
C160.083 (3)0.050 (2)0.045 (2)0.012 (2)0.012 (2)−0.0052 (19)
C170.113 (4)0.052 (2)0.048 (2)0.001 (3)0.018 (3)−0.005 (2)
C180.066 (3)0.049 (2)0.042 (2)−0.011 (2)0.001 (2)0.0043 (18)
C190.055 (2)0.045 (2)0.0339 (19)−0.0059 (18)0.0061 (17)0.0028 (16)
C200.052 (2)0.068 (3)0.051 (2)0.000 (2)0.014 (2)−0.010 (2)
C210.047 (2)0.077 (3)0.046 (2)−0.006 (2)0.005 (2)−0.016 (2)
C220.050 (2)0.046 (2)0.044 (2)−0.0031 (19)0.010 (2)−0.0013 (18)
C230.047 (2)0.055 (2)0.053 (2)0.0088 (19)0.006 (2)0.0049 (19)
C240.054 (2)0.058 (2)0.047 (2)0.001 (2)−0.0086 (19)0.0080 (19)
N1—C41.467 (5)C8—C91.466 (5)
N1—C11.478 (4)C8—H80.9300
N1—C51.481 (4)C9—C101.383 (5)
N2—C21.465 (5)C9—C141.395 (5)
N2—C151.479 (4)C10—C111.398 (5)
N2—C31.483 (4)C10—H100.9300
N3—C81.269 (5)C11—C121.381 (6)
N3—C71.467 (5)C11—H110.9300
N4—C181.256 (5)C12—C131.392 (5)
N4—C171.458 (5)C13—C141.390 (5)
O1—C121.361 (4)C13—H130.9300
O1—H10.8200C14—H140.9300
O2—C221.367 (4)C15—C161.513 (6)
O2—H20.8200C15—H15A0.9700
C1—C21.511 (5)C15—H15B0.9700
C1—H1A0.9700C16—C171.520 (5)
C1—H1B0.9700C16—H16A0.9700
C2—H2A0.9700C16—H16B0.9700
C2—H2B0.9700C17—H17A0.9700
C3—C41.509 (5)C17—H17B0.9700
C3—H3A0.9700C18—C191.468 (5)
C3—H3B0.9700C18—H180.9300
C4—H4A0.9700C19—C201.384 (5)
C4—H4B0.9700C19—C241.394 (5)
C5—C61.504 (6)C20—C211.386 (5)
C5—H5A0.9700C20—H200.9300
C5—H5B0.9700C21—C221.387 (5)
C6—C71.529 (6)C21—H210.9300
C6—H6A0.9700C22—C231.374 (5)
C6—H6B0.9700C23—C241.382 (5)
C7—H7A0.9700C23—H230.9300
C7—H7B0.9700C24—H240.9300
C4—N1—C1107.4 (3)C10—C9—C8120.7 (4)
C4—N1—C5110.5 (3)C14—C9—C8121.2 (4)
C1—N1—C5111.9 (3)C9—C10—C11121.5 (4)
C2—N2—C15109.7 (3)C9—C10—H10119.3
C2—N2—C3108.3 (3)C11—C10—H10119.3
C15—N2—C3112.1 (3)C12—C11—C10120.0 (4)
C8—N3—C7118.2 (4)C12—C11—H11120.0
C18—N4—C17119.5 (4)C10—C11—H11120.0
C12—O1—H1109.5O1—C12—C11118.1 (3)
C22—O2—H2109.5O1—C12—C13122.8 (3)
N1—C1—C2110.5 (3)C11—C12—C13119.1 (3)
N1—C1—H1A109.5C14—C13—C12120.6 (3)
C2—C1—H1A109.5C14—C13—H13119.7
N1—C1—H1B109.5C12—C13—H13119.7
C2—C1—H1B109.5C13—C14—C9120.7 (3)
H1A—C1—H1B108.1C13—C14—H14119.7
N2—C2—C1112.5 (3)C9—C14—H14119.7
N2—C2—H2A109.1N2—C15—C16114.4 (3)
C1—C2—H2A109.1N2—C15—H15A108.7
N2—C2—H2B109.1C16—C15—H15A108.7
C1—C2—H2B109.1N2—C15—H15B108.7
H2A—C2—H2B107.8C16—C15—H15B108.7
N2—C3—C4110.4 (3)H15A—C15—H15B107.6
N2—C3—H3A109.6C15—C16—C17112.4 (4)
C4—C3—H3A109.6C15—C16—H16A109.1
N2—C3—H3B109.6C17—C16—H16A109.1
C4—C3—H3B109.6C15—C16—H16B109.1
H3A—C3—H3B108.1C17—C16—H16B109.1
N1—C4—C3112.1 (3)H16A—C16—H16B107.9
N1—C4—H4A109.2N4—C17—C16111.1 (3)
C3—C4—H4A109.2N4—C17—H17A109.4
N1—C4—H4B109.2C16—C17—H17A109.4
C3—C4—H4B109.2N4—C17—H17B109.4
H4A—C4—H4B107.9C16—C17—H17B109.4
N1—C5—C6114.6 (3)H17A—C17—H17B108.0
N1—C5—H5A108.6N4—C18—C19123.2 (4)
C6—C5—H5A108.6N4—C18—H18118.4
N1—C5—H5B108.6C19—C18—H18118.4
C6—C5—H5B108.6C20—C19—C24117.8 (3)
H5A—C5—H5B107.6C20—C19—C18121.0 (4)
C5—C6—C7112.6 (4)C24—C19—C18121.2 (4)
C5—C6—H6A109.1C19—C20—C21121.3 (4)
C7—C6—H6A109.1C19—C20—H20119.3
C5—C6—H6B109.1C21—C20—H20119.3
C7—C6—H6B109.1C20—C21—C22120.1 (4)
H6A—C6—H6B107.8C20—C21—H21120.0
N3—C7—C6110.8 (3)C22—C21—H21120.0
N3—C7—H7A109.5O2—C22—C23118.2 (3)
C6—C7—H7A109.5O2—C22—C21122.6 (3)
N3—C7—H7B109.5C23—C22—C21119.1 (3)
C6—C7—H7B109.5C22—C23—C24120.7 (3)
H7A—C7—H7B108.1C22—C23—H23119.6
N3—C8—C9122.7 (4)C24—C23—H23119.6
N3—C8—H8118.6C23—C24—C19120.9 (4)
C9—C8—H8118.6C23—C24—H24119.5
C10—C9—C14118.1 (3)C19—C24—H24119.5
C4—N1—C1—C2−57.8 (4)O1—C12—C13—C14−178.9 (3)
C5—N1—C1—C2−179.3 (3)C11—C12—C13—C140.7 (6)
C15—N2—C2—C1−179.4 (3)C12—C13—C14—C90.8 (5)
C3—N2—C2—C1−56.8 (4)C10—C9—C14—C13−2.5 (5)
N1—C1—C2—N259.2 (4)C8—C9—C14—C13178.4 (3)
C2—N2—C3—C456.1 (4)C2—N2—C15—C16−172.3 (3)
C15—N2—C3—C4177.3 (3)C3—N2—C15—C1667.3 (4)
C1—N1—C4—C359.4 (4)N2—C15—C16—C17165.2 (3)
C5—N1—C4—C3−178.3 (3)C18—N4—C17—C16109.1 (5)
N2—C3—C4—N1−60.0 (4)C15—C16—C17—N4−77.3 (5)
C4—N1—C5—C6177.5 (3)C17—N4—C18—C19179.8 (3)
C1—N1—C5—C6−62.9 (4)N4—C18—C19—C20−7.1 (5)
N1—C5—C6—C7−164.6 (3)N4—C18—C19—C24173.7 (3)
C8—N3—C7—C6−125.9 (4)C24—C19—C20—C210.1 (5)
C5—C6—C7—N370.6 (5)C18—C19—C20—C21−179.0 (3)
C7—N3—C8—C9−179.6 (3)C19—C20—C21—C22−0.4 (6)
N3—C8—C9—C10172.5 (4)C20—C21—C22—O2178.0 (3)
N3—C8—C9—C14−8.3 (5)C20—C21—C22—C230.1 (5)
C14—C9—C10—C112.7 (6)O2—C22—C23—C24−177.6 (3)
C8—C9—C10—C11−178.1 (3)C21—C22—C23—C240.4 (5)
C9—C10—C11—C12−1.3 (6)C22—C23—C24—C19−0.7 (5)
C10—C11—C12—O1179.2 (3)C20—C19—C24—C230.4 (5)
C10—C11—C12—C13−0.4 (6)C18—C19—C24—C23179.6 (3)
D—H···AD—HH···AD···AD—H···A
O2—H2···N1i0.821.982.762 (4)159
O1—H1···N2ii0.822.002.780 (4)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯N1i 0.821.982.762 (4)159
O1—H1⋯N2ii 0.822.002.780 (4)159

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure and dimensionality of coordination complexes correlated to piperazine conformation: from discrete [CuII2] and [CuII4] complexes to a micro1,3-N3- bridged [CuII2]n chain.

Authors:  Alok Ranjan Paital; Debashree Mandal; Xiaoying Huang; Jing Li; Guillem Aromí; Debashis Ray
Journal:  Dalton Trans       Date:  2009-02-28       Impact factor: 4.390

  2 in total

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