| Literature DB >> 21578688 |
Kun Wang1, Yan-Qin Wang, Jian-Yong Zhang, En-Qing Gao.
Abstract
In the title compound, [Co(N(3))(2)(H(2)O)(4)]·C(14)H(12)N(2)O(4)·2H(2)O, the metal complex mol-ecule is centrosymmetric, the Co(II) ion being six-coordinated by two azide N atoms and four aqua O atoms with a trans-octa-hedral geometry. The zwitterionic organic mol-ecule is also centrosymmetric. In the crystal, the components are associated into a two-dimensional network through O-H⋯O hydrogen bonds. Further O-H⋯O and O-H⋯N inter-actions give a three-dimensional structure. The free water molecule is disordered over two positions in a 0.787 (5):0.213 (5) ratio.Entities:
Year: 2009 PMID: 21578688 PMCID: PMC2971761 DOI: 10.1107/S1600536809049848
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(N3)2(H2O)4]·C14H12N2O4·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7436 reflections | |
| θ = 2.5–27.6° | |
| µ = 0.89 mm−1 | |
| α = 71.402 (3)° | |
| β = 85.568 (2)° | Sheet, orange |
| γ = 69.752 (2)° | 0.08 × 0.08 × 0.02 mm |
| Bruker APEXII CCD area-detector diffractometer | 2029 independent reflections |
| Radiation source: fine-focus sealed tube | 2016 reflections with |
| graphite | |
| phi and ω scans | θmax = 26.0°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 6498 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2029 reflections | Δρmax = 0.34 e Å−3 |
| 183 parameters | Δρmin = −0.35 e Å−3 |
| 13 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.072 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Co1 | 0.5000 | 0.5000 | 0.0000 | 0.02233 (16) | |
| N1 | −0.0182 (2) | 0.06625 (19) | 0.78289 (17) | 0.0240 (3) | |
| N2 | 0.5369 (3) | 0.4349 (3) | 0.2408 (2) | 0.0458 (5) | |
| N3 | 0.4823 (2) | 0.3822 (2) | 0.36258 (18) | 0.0283 (4) | |
| O3 | 0.4820 (2) | 0.26543 (17) | 0.02090 (16) | 0.0300 (3) | |
| H31 | 0.425 (4) | 0.272 (3) | −0.058 (2) | 0.045* | |
| H32 | 0.420 (4) | 0.229 (3) | 0.099 (2) | 0.045* | |
| O4 | 0.18626 (19) | 0.59340 (17) | 0.00759 (16) | 0.0298 (3) | |
| H42 | 0.146 (4) | 0.535 (3) | 0.087 (2) | 0.045* | |
| H41 | 0.135 (4) | 0.600 (3) | −0.072 (2) | 0.045* | |
| C1 | 0.1394 (3) | 0.2551 (3) | 0.3161 (2) | 0.0316 (4) | |
| C2 | 0.0846 (3) | 0.1895 (2) | 0.4838 (2) | 0.0267 (4) | |
| C3 | 0.1985 (3) | 0.0345 (2) | 0.5774 (2) | 0.0284 (4) | |
| H3A | 0.3109 | −0.0288 | 0.5392 | 0.034* | |
| C4 | 0.1448 (3) | −0.0255 (2) | 0.7271 (2) | 0.0279 (4) | |
| H4A | 0.2211 | −0.1298 | 0.7903 | 0.033* | |
| C5 | −0.1306 (3) | 0.2167 (2) | 0.6939 (2) | 0.0322 (4) | |
| H5A | −0.2426 | 0.2779 | 0.7342 | 0.039* | |
| C6 | −0.0818 (3) | 0.2812 (3) | 0.5435 (2) | 0.0335 (4) | |
| H6A | −0.1602 | 0.3859 | 0.4823 | 0.040* | |
| C7 | −0.0719 (3) | −0.0022 (2) | 0.9445 (2) | 0.0283 (4) | |
| H7A | −0.0663 | −0.1156 | 0.9636 | 0.034* | |
| H7B | −0.2061 | 0.0631 | 0.9607 | 0.034* | |
| N4 | 0.4358 (4) | 0.3278 (3) | 0.4876 (2) | 0.0546 (6) | |
| O1 | 0.2747 (3) | 0.1567 (2) | 0.26605 (18) | 0.0470 (4) | |
| O2 | 0.0391 (2) | 0.4020 (2) | 0.24191 (17) | 0.0447 (4) | |
| O5 | 0.2585 (3) | 0.2801 (3) | 0.7844 (2) | 0.0415 (7) | 0.787 (5) |
| H5 | 0.344 (3) | 0.244 (3) | 0.727 (3) | 0.062* | |
| H51 | 0.193 (5) | 0.377 (3) | 0.760 (4) | 0.062* | 0.787 (5) |
| O5' | 0.4261 (18) | 0.1544 (12) | 0.7953 (9) | 0.059 (3) | 0.213 (5) |
| H52 | 0.506 (13) | 0.097 (6) | 0.744 (6) | 0.089* | 0.213 (5) |
| Co1 | 0.0217 (2) | 0.0262 (2) | 0.0185 (2) | −0.00944 (14) | 0.00190 (12) | −0.00503 (13) |
| N1 | 0.0264 (7) | 0.0293 (8) | 0.0161 (7) | −0.0115 (6) | 0.0029 (5) | −0.0050 (6) |
| N2 | 0.0542 (12) | 0.0691 (13) | 0.0221 (9) | −0.0363 (11) | 0.0023 (8) | −0.0080 (8) |
| N3 | 0.0273 (8) | 0.0341 (8) | 0.0252 (9) | −0.0110 (7) | −0.0001 (6) | −0.0105 (7) |
| O3 | 0.0309 (7) | 0.0337 (7) | 0.0279 (7) | −0.0147 (6) | 0.0038 (5) | −0.0096 (6) |
| O4 | 0.0256 (6) | 0.0341 (7) | 0.0267 (7) | −0.0118 (5) | 0.0019 (5) | −0.0041 (6) |
| C1 | 0.0371 (10) | 0.0469 (11) | 0.0172 (8) | −0.0266 (9) | −0.0001 (7) | −0.0048 (8) |
| C2 | 0.0309 (9) | 0.0378 (10) | 0.0169 (8) | −0.0208 (8) | −0.0002 (7) | −0.0058 (7) |
| C3 | 0.0308 (9) | 0.0330 (9) | 0.0230 (9) | −0.0120 (8) | 0.0068 (7) | −0.0108 (7) |
| C4 | 0.0299 (9) | 0.0262 (8) | 0.0231 (8) | −0.0073 (7) | 0.0028 (7) | −0.0048 (7) |
| C5 | 0.0291 (9) | 0.0329 (10) | 0.0260 (9) | −0.0043 (8) | 0.0027 (7) | −0.0052 (8) |
| C6 | 0.0327 (10) | 0.0333 (10) | 0.0248 (9) | −0.0077 (8) | −0.0026 (7) | 0.0008 (8) |
| C7 | 0.0322 (9) | 0.0345 (10) | 0.0163 (8) | −0.0142 (8) | 0.0062 (7) | −0.0037 (7) |
| N4 | 0.0637 (14) | 0.0823 (16) | 0.0274 (10) | −0.0407 (13) | 0.0125 (9) | −0.0150 (10) |
| O1 | 0.0690 (11) | 0.0510 (9) | 0.0277 (7) | −0.0306 (9) | 0.0198 (7) | −0.0143 (7) |
| O2 | 0.0378 (8) | 0.0585 (10) | 0.0247 (7) | −0.0191 (7) | 0.0001 (6) | 0.0074 (7) |
| O5 | 0.0513 (14) | 0.0524 (13) | 0.0298 (10) | −0.0267 (11) | 0.0064 (8) | −0.0162 (9) |
| O5' | 0.107 (9) | 0.048 (5) | 0.029 (4) | −0.031 (5) | −0.014 (4) | −0.011 (3) |
| Co1—N2 | 2.0903 (18) | C1—C2 | 1.524 (2) |
| Co1—N2i | 2.0903 (18) | C2—C3 | 1.382 (3) |
| Co1—O3i | 2.1152 (14) | C2—C6 | 1.384 (3) |
| Co1—O3 | 2.1152 (14) | C3—C4 | 1.375 (3) |
| Co1—O4i | 2.1230 (13) | C3—H3A | 0.9300 |
| Co1—O4 | 2.1230 (13) | C4—H4A | 0.9300 |
| N1—C5 | 1.340 (2) | C5—C6 | 1.376 (3) |
| N1—C4 | 1.350 (2) | C5—H5A | 0.9300 |
| N1—C7 | 1.479 (2) | C6—H6A | 0.9300 |
| N2—N3 | 1.154 (2) | C7—C7ii | 1.519 (4) |
| N3—N4 | 1.159 (3) | C7—H7A | 0.9700 |
| O3—H31 | 0.826 (16) | C7—H7B | 0.9700 |
| O3—H32 | 0.847 (16) | O5—H5 | 0.824 (17) |
| O4—H42 | 0.846 (16) | O5—H51 | 0.802 (17) |
| O4—H41 | 0.812 (16) | O5'—H5 | 0.894 (17) |
| C1—O1 | 1.239 (3) | O5'—H52 | 0.85 (2) |
| C1—O2 | 1.256 (3) | ||
| N2—Co1—N2i | 180.0 | O1—C1—O2 | 126.83 (18) |
| N2—Co1—O3i | 89.06 (7) | O1—C1—C2 | 116.63 (18) |
| N2i—Co1—O3i | 90.94 (7) | O2—C1—C2 | 116.51 (18) |
| N2—Co1—O3 | 90.94 (7) | C3—C2—C6 | 118.98 (16) |
| N2i—Co1—O3 | 89.06 (7) | C3—C2—C1 | 120.08 (18) |
| O3i—Co1—O3 | 180.00 (8) | C6—C2—C1 | 120.92 (18) |
| N2—Co1—O4i | 87.27 (7) | C4—C3—C2 | 119.67 (17) |
| N2i—Co1—O4i | 92.73 (7) | C4—C3—H3A | 120.2 |
| O3i—Co1—O4i | 88.65 (5) | C2—C3—H3A | 120.2 |
| O3—Co1—O4i | 91.35 (5) | N1—C4—C3 | 120.32 (17) |
| N2—Co1—O4 | 92.73 (7) | N1—C4—H4A | 119.8 |
| N2i—Co1—O4 | 87.27 (7) | C3—C4—H4A | 119.8 |
| O3i—Co1—O4 | 91.35 (5) | N1—C5—C6 | 120.57 (18) |
| O3—Co1—O4 | 88.65 (5) | N1—C5—H5A | 119.7 |
| O4i—Co1—O4 | 180.00 (3) | C6—C5—H5A | 119.7 |
| C5—N1—C4 | 120.90 (15) | C5—C6—C2 | 119.56 (18) |
| C5—N1—C7 | 120.17 (15) | C5—C6—H6A | 120.2 |
| C4—N1—C7 | 118.94 (15) | C2—C6—H6A | 120.2 |
| N3—N2—Co1 | 148.27 (17) | N1—C7—C7ii | 109.17 (18) |
| N2—N3—N4 | 177.0 (2) | N1—C7—H7A | 109.8 |
| Co1—O3—H31 | 109.2 (19) | C7ii—C7—H7A | 109.8 |
| Co1—O3—H32 | 113.4 (18) | N1—C7—H7B | 109.8 |
| H31—O3—H32 | 108 (2) | C7ii—C7—H7B | 109.8 |
| Co1—O4—H42 | 111.1 (18) | H7A—C7—H7B | 108.3 |
| Co1—O4—H41 | 110.5 (19) | H5—O5—H51 | 121 (3) |
| H42—O4—H41 | 112 (2) | H5—O5'—H52 | 107 (3) |
| O3i—Co1—N2—N3 | 129.7 (4) | C5—N1—C4—C3 | 0.1 (3) |
| O3—Co1—N2—N3 | −50.3 (4) | C7—N1—C4—C3 | 179.88 (17) |
| O4i—Co1—N2—N3 | −141.6 (4) | C2—C3—C4—N1 | −0.1 (3) |
| O4—Co1—N2—N3 | 38.4 (4) | C4—N1—C5—C6 | −0.2 (3) |
| O1—C1—C2—C3 | 7.4 (3) | C7—N1—C5—C6 | −179.94 (18) |
| O2—C1—C2—C3 | −174.40 (18) | N1—C5—C6—C2 | 0.2 (3) |
| O1—C1—C2—C6 | −170.78 (19) | C3—C2—C6—C5 | −0.1 (3) |
| O2—C1—C2—C6 | 7.4 (3) | C1—C2—C6—C5 | 178.15 (18) |
| C6—C2—C3—C4 | 0.0 (3) | C5—N1—C7—C7ii | −107.1 (2) |
| C1—C2—C3—C4 | −178.22 (17) | C4—N1—C7—C7ii | 73.1 (3) |
| H··· | ||||
| O3—H31···O5iii | 0.83 (2) | 1.91 (2) | 2.727 (2) | 170 (2) |
| O3—H31···O5'iii | 0.83 (2) | 1.96 (2) | 2.664 (8) | 143 (3) |
| O4—H41···O2iv | 0.81 (2) | 2.07 (2) | 2.870 (2) | 167 (3) |
| O5—H51···O2v | 0.80 (2) | 2.11 (2) | 2.877 (3) | 160 (4) |
| O3—H32···O1 | 0.85 (2) | 1.85 (2) | 2.694 (2) | 178 (3) |
| O4—H42···O2 | 0.85 (2) | 1.85 (2) | 2.687 (2) | 172 (2) |
| O5—H5···N4 | 0.82 (2) | 2.19 (2) | 2.864 (3) | 139 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H31⋯O5i | 0.826 (16) | 1.908 (18) | 2.727 (2) | 170 (2) |
| O3—H31⋯O5′i | 0.826 (16) | 1.96 (2) | 2.664 (8) | 143 (3) |
| O4—H41⋯O2ii | 0.812 (16) | 2.072 (18) | 2.870 (2) | 167 (3) |
| O5—H51⋯O2iii | 0.802 (17) | 2.110 (18) | 2.877 (3) | 160 (4) |
| O3—H32⋯O1 | 0.847 (16) | 1.847 (17) | 2.694 (2) | 178 (3) |
| O4—H42⋯O2 | 0.846 (16) | 1.847 (17) | 2.687 (2) | 172 (2) |
| O5—H5⋯N4 | 0.824 (17) | 2.19 (2) | 2.864 (3) | 138.6 (19) |
Symmetry codes: (i) ; (ii) ; (iii) .