Literature DB >> 21578669

Aqua-{6,6-dimeth-oxy-2,2'-[propane-1,3-diylbis(nitrilo-methyl-idyne)]diphenolato-κO,N,N',O'}copper(II) acetonitrile solvate.

Xinfang Wang1.   

Abstract

In the title compound, [Cu(C(19)H(20)N(2)O(4))(H(2)O)]·C(2)H(3)N, the Cu(II) ion is coordinated by two N and two O atoms from the tetra-dentate Schiff base ligand, which contains a propyl-ene fragment disordered over two conformations in a 0.64 (1):0.36 (1) ratio, and one O atom from the water mol-ecule in a distorted square-pyramidal geometry. In the crystal structure, inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into chains along the a axis.

Entities:  

Year:  2009        PMID: 21578669      PMCID: PMC2971939          DOI: 10.1107/S1600536809049137

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related crystal structures, see: Nathan et al. (2003 ▶); Saha et al. (2007 ▶); Xing (2009 ▶).

Experimental

Crystal data

[Cu(C19H20N2O4)(H2O)C2H3N M = 462.98 Monoclinic, a = 5.4003 (9) Å b = 19.155 (4) Å c = 10.3891 (18) Å β = 98.862 (3)° V = 1061.8 (3) Å3 Z = 2 Mo Kα radiation μ = 1.07 mm−1 T = 273 K 0.15 × 0.13 × 0.09 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.857, T max = 0.910 6127 measured reflections 4000 independent reflections 3145 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.128 S = 1.03 4000 reflections 274 parameters 1 restraint . Δρmax = 0.40 e Å−3 Δρmin = −0.58 e Å−3 Absolute structure: Flack (1983 ▶), 1570 Friedel pairs Flack parameter: 0.00 (2) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809049137/cv2650sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809049137/cv2650Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C19H20N2O4)(H2O)]·C2H3NF(000) = 482
Mr = 462.98Dx = 1.448 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
a = 5.4003 (9) ÅCell parameters from 1983 reflections
b = 19.155 (4) Åθ = 2.9–22.0°
c = 10.3891 (18) ŵ = 1.07 mm1
β = 98.862 (3)°T = 273 K
V = 1061.8 (3) Å3Block, green
Z = 20.15 × 0.13 × 0.09 mm
Bruker APEXII CCD area-detector diffractometer4000 independent reflections
Radiation source: fine-focus sealed tube3145 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 27.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)h = −6→7
Tmin = 0.857, Tmax = 0.910k = −17→24
6127 measured reflectionsl = −13→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.048w = 1/[σ2(Fo2) + (0.061P)2 + 0.2306P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.128(Δ/σ)max = 0.001
S = 1.03Δρmax = 0.40 e Å3
4000 reflectionsΔρmin = −0.58 e Å3
274 parametersAbsolute structure: Flack (1983), 1570 Friedel pairs
1 restraintFlack parameter: 0.00 (2)
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cu10.91053 (9)0.74577 (4)0.52909 (5)0.04410 (17)
N11.0195 (8)0.7458 (5)0.3513 (4)0.0637 (11)
N21.1012 (9)0.8326 (3)0.5920 (5)0.0580 (12)
O10.6757 (7)0.6700 (2)0.4746 (3)0.0532 (9)
O20.7350 (5)0.7475 (3)0.6805 (3)0.0516 (7)
O31.2273 (8)0.6746 (2)0.6203 (4)0.0565 (10)
H3B1.27520.64830.56670.06 (2)*
H3A1.34260.69500.66590.09 (3)*
O40.3574 (8)0.5659 (2)0.4627 (5)0.0743 (12)
O50.4665 (8)0.7216 (2)0.8637 (4)0.0733 (14)
C10.4793 (10)0.5744 (3)0.3569 (5)0.0539 (13)
C20.6506 (9)0.6313 (3)0.3692 (5)0.0481 (12)
C30.7817 (11)0.6420 (3)0.2649 (5)0.0573 (14)
C40.7478 (14)0.5969 (4)0.1560 (6)0.0737 (19)
H40.84110.60380.08890.088*
C50.5837 (14)0.5444 (4)0.1482 (6)0.0773 (19)
H50.56080.51600.07480.093*
C60.4434 (13)0.5316 (3)0.2509 (6)0.0653 (16)
H60.32970.49490.24580.078*
C70.9537 (11)0.6988 (4)0.2631 (5)0.0657 (16)
H71.02800.70250.18840.079*
C80.1745 (12)0.5122 (4)0.4587 (7)0.0771 (18)
H8A0.23160.47140.41840.116*
H8B0.01970.52790.40920.116*
H8C0.14880.50110.54580.116*
C91.2883 (16)0.8635 (5)0.5191 (8)0.0919 (16)0.355 (10)
H9A1.22330.90850.48710.110*0.355 (10)
H9B1.43740.87270.58170.110*0.355 (10)
C9'1.2883 (16)0.8635 (5)0.5191 (8)0.0919 (16)0.645 (10)
H9'11.44330.83730.53730.110*0.645 (10)
H9'21.32270.91120.54820.110*0.645 (10)
C101.365 (3)0.8290 (10)0.4150 (19)0.073 (3)0.355 (10)
H10A1.48800.79500.45310.088*0.355 (10)
H10B1.45630.86330.37200.088*0.355 (10)
C10A1.198 (2)0.8632 (5)0.3764 (10)0.073 (3)0.645 (10)
H10C1.02570.87920.36080.088*0.645 (10)
H10D1.29760.89600.33480.088*0.645 (10)
C111.2121 (15)0.7941 (5)0.3158 (7)0.0919 (16)0.355 (10)
H11A1.31950.76770.26690.110*0.355 (10)
H11B1.12710.82890.25720.110*0.355 (10)
C11'1.2121 (15)0.7941 (5)0.3158 (7)0.0919 (16)0.645 (10)
H11C1.37700.77430.34350.110*0.645 (10)
H11D1.18910.79930.22190.110*0.645 (10)
C121.0861 (11)0.8625 (3)0.7019 (6)0.0601 (14)
H121.19020.90100.72160.072*
C130.9337 (11)0.8453 (3)0.7972 (5)0.0549 (13)
C140.7679 (9)0.7890 (3)0.7800 (5)0.0481 (12)
C150.6222 (10)0.7774 (3)0.8845 (5)0.0575 (14)
C160.6491 (12)0.8209 (4)0.9914 (5)0.0717 (18)
H160.55290.81291.05680.086*
C170.8133 (16)0.8756 (4)1.0037 (6)0.086 (2)
H170.82630.90441.07650.103*
C180.9574 (14)0.8881 (4)0.9103 (6)0.0734 (17)
H181.07190.92460.92020.088*
C190.3062 (12)0.7070 (4)0.9568 (6)0.079 (2)
H19A0.19940.74640.96380.119*
H19B0.40550.69791.03990.119*
H19C0.20530.66680.92940.119*
N30.4416 (17)0.4878 (4)0.7839 (7)0.118 (3)
C200.7826 (12)0.5758 (4)0.7570 (7)0.0726 (17)
H20A0.79750.57910.66630.109*
H20B0.93940.56080.80540.109*
H20C0.73940.62070.78810.109*
C210.5916 (15)0.5266 (4)0.7737 (6)0.0719 (18)
U11U22U33U12U13U23
Cu10.0424 (3)0.0463 (3)0.0456 (3)−0.0022 (4)0.01310 (18)−0.0013 (4)
N10.069 (2)0.077 (3)0.047 (2)−0.014 (4)0.0168 (17)0.007 (4)
N20.060 (3)0.045 (3)0.071 (3)−0.002 (2)0.017 (2)0.002 (2)
O10.0527 (19)0.061 (2)0.0478 (19)−0.0123 (18)0.0157 (15)−0.0158 (17)
O20.0521 (15)0.0582 (19)0.0477 (16)−0.009 (3)0.0178 (12)−0.016 (3)
O30.055 (2)0.056 (2)0.059 (2)0.008 (2)0.011 (2)−0.006 (2)
O40.071 (3)0.070 (3)0.087 (3)−0.025 (2)0.028 (2)−0.027 (2)
O50.065 (2)0.107 (4)0.053 (2)−0.016 (2)0.0255 (19)−0.013 (2)
C10.053 (3)0.049 (3)0.058 (3)0.005 (2)0.000 (2)−0.009 (2)
C20.041 (3)0.052 (3)0.051 (3)0.010 (2)0.005 (2)−0.004 (2)
C30.068 (3)0.067 (4)0.037 (2)0.018 (3)0.009 (2)0.001 (2)
C40.093 (5)0.079 (5)0.049 (3)0.019 (4)0.013 (3)−0.008 (3)
C50.105 (5)0.060 (4)0.064 (4)0.010 (4)0.003 (4)−0.020 (3)
C60.069 (4)0.051 (4)0.073 (4)0.013 (3)0.001 (3)−0.012 (3)
C70.069 (4)0.088 (5)0.044 (3)0.002 (3)0.023 (3)0.007 (3)
C80.067 (4)0.056 (4)0.109 (5)−0.014 (3)0.017 (4)−0.014 (4)
C90.101 (4)0.092 (4)0.091 (4)−0.037 (3)0.039 (3)−0.004 (3)
C9'0.101 (4)0.092 (4)0.091 (4)−0.037 (3)0.039 (3)−0.004 (3)
C100.075 (6)0.062 (6)0.089 (6)−0.005 (4)0.031 (5)0.034 (5)
C10A0.075 (6)0.062 (6)0.089 (6)−0.005 (4)0.031 (5)0.034 (5)
C110.101 (4)0.092 (4)0.091 (4)−0.037 (3)0.039 (3)−0.004 (3)
C11'0.101 (4)0.092 (4)0.091 (4)−0.037 (3)0.039 (3)−0.004 (3)
C120.065 (3)0.038 (3)0.075 (4)−0.005 (3)0.006 (3)−0.005 (3)
C130.062 (3)0.041 (3)0.059 (3)0.009 (3)0.000 (3)−0.005 (2)
C140.045 (3)0.054 (3)0.044 (3)0.011 (2)0.004 (2)0.001 (2)
C150.050 (3)0.072 (4)0.050 (3)0.011 (3)0.006 (2)−0.007 (2)
C160.076 (4)0.099 (6)0.040 (3)0.017 (4)0.010 (3)−0.010 (3)
C170.124 (6)0.078 (5)0.054 (4)0.020 (5)0.004 (4)−0.023 (3)
C180.101 (5)0.051 (4)0.065 (4)0.006 (4)0.001 (4)−0.013 (3)
C190.068 (4)0.116 (6)0.058 (3)0.007 (4)0.026 (3)0.019 (4)
N30.153 (7)0.114 (7)0.096 (5)−0.044 (6)0.046 (5)0.025 (5)
C200.081 (4)0.061 (4)0.079 (4)0.004 (3)0.024 (3)0.010 (3)
C210.109 (5)0.065 (4)0.047 (3)0.002 (4)0.031 (3)0.007 (3)
Cu1—O11.954 (4)C8—H8C0.9600
Cu1—O21.958 (3)C9—C101.39 (2)
Cu1—N22.012 (5)C9—H9A0.9700
Cu1—N12.023 (4)C9—H9B0.9700
Cu1—O32.276 (4)C10—C111.39 (2)
N1—C71.294 (9)C10—H10A0.9700
N1—C111.480 (9)C10—H10B0.9700
N2—C121.292 (7)C10A—H10C0.9700
N2—C91.476 (8)C10A—H10D0.9700
O1—C21.311 (6)C11—H11A0.9700
O2—C141.294 (7)C11—H11B0.9700
O3—H3B0.8219C12—C131.420 (8)
O3—H3A0.8213C12—H120.9300
O4—C11.375 (6)C13—C141.396 (8)
O4—C81.421 (7)C13—C181.422 (8)
O5—C151.357 (7)C14—C151.453 (7)
O5—C191.422 (6)C15—C161.378 (9)
C1—C61.363 (8)C16—C171.365 (11)
C1—C21.422 (8)C16—H160.9300
C2—C31.399 (7)C17—C181.355 (9)
C3—C41.413 (8)C17—H170.9300
C3—C71.433 (9)C18—H180.9300
C4—C51.334 (10)C19—H19A0.9600
C4—H40.9300C19—H19B0.9600
C5—C61.422 (9)C19—H19C0.9600
C5—H50.9300N3—C211.117 (9)
C6—H60.9300C20—C211.428 (9)
C7—H70.9300C20—H20A0.9600
C8—H8A0.9600C20—H20B0.9600
C8—H8B0.9600C20—H20C0.9600
O1—Cu1—O282.67 (17)N2—C9—H9A107.0
O1—Cu1—N2170.30 (18)C10—C9—H9B107.0
O2—Cu1—N290.7 (2)N2—C9—H9B107.0
O1—Cu1—N190.2 (2)H9A—C9—H9B106.7
O2—Cu1—N1168.09 (15)C9—C10—C11126.4 (14)
N2—Cu1—N195.2 (3)C9—C10—H10A105.7
O1—Cu1—O395.05 (17)C11—C10—H10A105.7
O2—Cu1—O395.83 (17)C9—C10—H10B105.7
N2—Cu1—O392.6 (2)C11—C10—H10B105.7
N1—Cu1—O394.3 (2)H10A—C10—H10B106.2
C7—N1—C11112.6 (5)H10C—C10A—H10D107.7
C7—N1—Cu1124.0 (5)C10—C11—N1118.5 (8)
C11—N1—Cu1122.8 (5)C10—C11—H11A107.7
C12—N2—C9114.6 (6)N1—C11—H11A107.7
C12—N2—Cu1123.7 (4)C10—C11—H11B107.7
C9—N2—Cu1121.4 (4)N1—C11—H11B107.7
C2—O1—Cu1129.8 (3)H11A—C11—H11B107.1
C14—O2—Cu1129.0 (4)N2—C12—C13129.4 (6)
Cu1—O3—H3B112.4N2—C12—H12115.3
Cu1—O3—H3A114.2C13—C12—H12115.3
H3B—O3—H3A113.1C14—C13—C12121.4 (5)
C1—O4—C8118.6 (5)C14—C13—C18121.7 (6)
C15—O5—C19118.2 (5)C12—C13—C18117.0 (6)
C6—C1—O4123.3 (6)O2—C14—C13125.6 (5)
C6—C1—C2122.9 (6)O2—C14—C15118.7 (5)
O4—C1—C2113.8 (4)C13—C14—C15115.7 (5)
O1—C2—C3124.4 (5)O5—C15—C16126.3 (6)
O1—C2—C1119.3 (4)O5—C15—C14113.2 (5)
C3—C2—C1116.3 (5)C16—C15—C14120.5 (6)
C2—C3—C4120.8 (6)C17—C16—C15121.8 (6)
C2—C3—C7121.9 (5)C17—C16—H16119.1
C4—C3—C7117.3 (6)C15—C16—H16119.1
C5—C4—C3120.8 (6)C18—C17—C16120.3 (6)
C5—C4—H4119.6C18—C17—H17119.9
C3—C4—H4119.6C16—C17—H17119.9
C4—C5—C6120.7 (6)C17—C18—C13120.1 (7)
C4—C5—H5119.7C17—C18—H18119.9
C6—C5—H5119.6C13—C18—H18119.9
C1—C6—C5118.5 (7)O5—C19—H19A109.5
C1—C6—H6120.8O5—C19—H19B109.5
C5—C6—H6120.8H19A—C19—H19B109.5
N1—C7—C3128.8 (5)O5—C19—H19C109.5
N1—C7—H7115.6H19A—C19—H19C109.5
C3—C7—H7115.6H19B—C19—H19C109.5
O4—C8—H8A109.5C21—C20—H20A109.5
O4—C8—H8B109.5C21—C20—H20B109.5
H8A—C8—H8B109.5H20A—C20—H20B109.5
O4—C8—H8C109.5C21—C20—H20C109.5
H8A—C8—H8C109.5H20A—C20—H20C109.5
H8B—C8—H8C109.5H20B—C20—H20C109.5
C10—C9—N2121.3 (9)N3—C21—C20178.5 (8)
C10—C9—H9A107.0
D—H···AD—HH···AD···AD—H···A
O3—H3A···O2i0.822.333.055 (6)148
O3—H3A···O5i0.822.122.805 (6)140
O3—H3B···O1i0.822.533.048 (5)122
O3—H3B···O4i0.822.002.805 (6)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3A⋯O2i 0.822.333.055 (6)148
O3—H3A⋯O5i 0.822.122.805 (6)140
O3—H3B⋯O1i 0.822.533.048 (5)122
O3—H3B⋯O4i 0.822.002.805 (6)166

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {2,2'-[4,5-Dibromo-o-phenyl-enebis(nitrilo-dimethyl-idyne)]diphenolato-κO,N,N',O'}(methanol-κO)copper(II).

Authors:  Jianxin Xing
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-31
  2 in total

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