Literature DB >> 21578661

Poly[[diaquadi-μ-dicyanamido-nickel(II)] bis-(pyridinium-4-olate)].

Ling-Ling Zheng1.   

Abstract

The title compound, {[Ni(C(2)N(3))(2)(H(2)O)(2)]·2C(5)H(5)NO}(n), is a centrosymmetric two-dimensional coordination polymer with a layer (4,4) network structure. The asymmetric unit is compossed of an Ni(II) atom, which sits on an inversion center, a μ-1,5-bridging dicyanamide anion, a water mol-ecule, and a free 4-hydroxy-pyridine mol-ecule present in the zwitterionic pyridinium-4-olate form. The Ni(II) atom is coordinated in a slightly distorted N(4)O(2) octa-hedral geometry by four bridging dicyanamide ligands and two trans water mol-ecules. In the crystal, the two-dimensional networks are linked via N-H⋯O and O-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2009        PMID: 21578661      PMCID: PMC2972168          DOI: 10.1107/S1600536809048880

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For coordination polymers involving dicyanamide (dca), see: Manson et al. (1998 ▶, 2001 ▶); Batten et al. (1998 ▶). For nickel(II)dca complexes, see: Van der Werff et al. (2004 ▶); Armentano et al. (2006 ▶). For dicyanamide complexes with a co-ligand, see: Batten & Murray (2003 ▶); Manson et al. (1998 ▶, 2001 ▶); Miller & Manson (2001 ▶). For dicyanamide complexes with 4-cyano­pyridine as co-ligand, see: Dalai et al. (2002 ▶); Du et al. (2006 ▶).

Experimental

Crystal data

[Ni(C2N3)2(H2O)2]·2C5H5NO M = 417.02 Monoclinic, a = 7.8598 (6) Å b = 12.8199 (10) Å c = 9.1080 (7) Å β = 96.7530 (10)° V = 911.37 (12) Å3 Z = 2 Mo Kα radiation μ = 1.10 mm−1 T = 293 K 0.23 × 0.18 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.788, T max = 0.848 6950 measured reflections 1788 independent reflections 1606 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.073 S = 1.08 1788 reflections 136 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809048880/su2153sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048880/su2153Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C2N3)2(H2O)2]·2C5H5NOF(000) = 428
Mr = 417.02Dx = 1.520 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1788 reflections
a = 7.8598 (6) Åθ = 2.6–26.0°
b = 12.8199 (10) ŵ = 1.10 mm1
c = 9.1080 (7) ÅT = 293 K
β = 96.753 (1)°Block, green
V = 911.37 (12) Å30.23 × 0.18 × 0.15 mm
Z = 2
Bruker SMART CCD area-detector diffractometer1788 independent reflections
Radiation source: fine-focus sealed tube1606 reflections with I > 2σ(I)
graphiteRint = 0.016
φ and ω scansθmax = 26.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −8→9
Tmin = 0.788, Tmax = 0.848k = −15→15
6950 measured reflectionsl = −10→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.073H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0362P)2 + 0.2827P] where P = (Fo2 + 2Fc2)/3
1788 reflections(Δ/σ)max < 0.001
136 parametersΔρmax = 0.30 e Å3
4 restraintsΔρmin = −0.16 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni11.00001.00000.00000.03617 (12)
C10.9985 (2)0.59861 (12)0.1821 (2)0.0424 (4)
C20.9988 (3)0.75355 (14)0.0636 (2)0.0500 (5)
C30.6251 (3)0.38083 (17)0.1568 (3)0.0771 (7)
H30.71560.42480.14170.092*
C40.6426 (3)0.27675 (16)0.1384 (3)0.0657 (6)
H40.74340.25030.10880.079*
C50.5095 (2)0.20841 (13)0.1638 (2)0.0458 (4)
C60.3615 (3)0.25592 (16)0.2048 (3)0.0678 (7)
H60.26860.21450.22160.081*
C70.3507 (3)0.36025 (17)0.2205 (3)0.0683 (6)
H70.25130.38960.24860.082*
N10.9923 (2)0.84211 (11)0.05067 (19)0.0499 (4)
N21.0097 (3)0.65203 (13)0.0627 (2)0.0801 (7)
N30.9881 (2)0.54506 (12)0.28000 (17)0.0481 (4)
N40.4816 (3)0.42170 (13)0.1960 (2)0.0641 (5)
O10.52314 (18)0.10983 (10)0.15018 (18)0.0600 (4)
O1W1.26183 (19)0.99136 (10)0.01412 (19)0.0535 (4)
HN40.473 (4)0.4871 (14)0.214 (4)0.091 (10)*
H1WA1.330 (2)1.0346 (15)0.057 (2)0.070 (7)*
H1WB1.313 (2)0.9513 (14)−0.039 (2)0.061 (6)*
U11U22U33U12U13U23
Ni10.0457 (2)0.02211 (17)0.0425 (2)−0.00065 (11)0.01317 (14)−0.00113 (11)
C10.0567 (11)0.0236 (7)0.0491 (10)0.0012 (7)0.0155 (8)−0.0022 (7)
C20.0751 (14)0.0337 (10)0.0449 (10)−0.0002 (9)0.0223 (9)0.0043 (8)
C30.0755 (16)0.0437 (12)0.117 (2)−0.0220 (11)0.0303 (15)−0.0086 (12)
C40.0528 (12)0.0457 (11)0.1031 (18)−0.0087 (9)0.0282 (12)−0.0134 (11)
C50.0489 (10)0.0324 (8)0.0575 (11)−0.0035 (7)0.0118 (8)−0.0082 (8)
C60.0577 (13)0.0430 (11)0.1088 (19)−0.0096 (9)0.0355 (13)−0.0184 (11)
C70.0627 (14)0.0477 (11)0.0971 (18)0.0079 (10)0.0204 (13)−0.0200 (11)
N10.0674 (11)0.0284 (8)0.0565 (9)−0.0011 (7)0.0182 (8)0.0034 (7)
N20.163 (2)0.0272 (8)0.0577 (11)0.0077 (10)0.0439 (12)0.0057 (8)
N30.0675 (11)0.0315 (8)0.0472 (9)0.0000 (7)0.0144 (7)0.0043 (7)
N40.0811 (14)0.0302 (9)0.0808 (13)0.0004 (8)0.0082 (11)−0.0084 (8)
O10.0604 (9)0.0298 (6)0.0932 (11)−0.0021 (6)0.0234 (8)−0.0126 (7)
O1W0.0447 (7)0.0448 (8)0.0725 (10)−0.0022 (6)0.0135 (7)−0.0208 (7)
Ni1—O1Wi2.0498 (15)C4—C51.405 (3)
Ni1—O1W2.0498 (15)C4—H40.9300
Ni1—N3ii2.0769 (16)C5—O11.276 (2)
Ni1—N3iii2.0769 (16)C5—C61.402 (3)
Ni1—N12.0785 (15)C6—C71.349 (3)
Ni1—N1i2.0785 (15)C6—H60.9300
C1—N31.136 (2)C7—N41.335 (3)
C1—N21.297 (3)C7—H70.9300
C2—N11.142 (2)N3—Ni1iv2.0769 (15)
C2—N21.304 (2)N4—HN40.858 (16)
C3—N41.330 (3)O1W—H1WA0.834 (9)
C3—C41.354 (3)O1W—H1WB0.840 (9)
C3—H30.9300
O1Wi—Ni1—O1W180.0C3—C4—H4119.8
O1Wi—Ni1—N3ii91.34 (7)C5—C4—H4119.8
O1W—Ni1—N3ii88.66 (7)O1—C5—C6122.59 (18)
O1Wi—Ni1—N3iii88.66 (7)O1—C5—C4121.93 (18)
O1W—Ni1—N3iii91.34 (7)C6—C5—C4115.49 (17)
N3ii—Ni1—N3iii180.00 (2)C7—C6—C5121.6 (2)
O1Wi—Ni1—N190.65 (6)C7—C6—H6119.2
O1W—Ni1—N189.35 (6)C5—C6—H6119.2
N3ii—Ni1—N186.80 (6)N4—C7—C6120.5 (2)
N3iii—Ni1—N193.20 (6)N4—C7—H7119.7
O1Wi—Ni1—N1i89.35 (6)C6—C7—H7119.7
O1W—Ni1—N1i90.65 (6)C2—N1—Ni1171.49 (17)
N3ii—Ni1—N1i93.20 (6)C1—N2—C2120.69 (18)
N3iii—Ni1—N1i86.80 (6)C1—N3—Ni1iv157.84 (15)
N1—Ni1—N1i180.0C3—N4—C7120.46 (18)
N3—C1—N2174.66 (19)C3—N4—HN4121 (2)
N1—C2—N2173.5 (2)C7—N4—HN4118 (2)
N4—C3—C4121.5 (2)Ni1—O1W—H1WA125.4 (15)
N4—C3—H3119.2Ni1—O1W—H1WB122.9 (14)
C4—C3—H3119.2H1WA—O1W—H1WB110.3 (15)
C3—C4—C5120.4 (2)
D—H···AD—HH···AD···AD—H···A
N4—HN4···O1v0.86 (2)2.00 (2)2.792 (2)153 (3)
O1W—H1WA···O1vi0.83 (1)1.91 (1)2.732 (2)167 (2)
O1W—H1WB···O1vii0.84 (1)1.90 (1)2.715 (2)164 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N4—HN4⋯O1i 0.858 (16)2.00 (2)2.792 (2)153 (3)
O1W—H1WA⋯O1ii 0.834 (9)1.912 (11)2.732 (2)167 (2)
O1W—H1WB⋯O1iii 0.840 (9)1.898 (11)2.715 (2)164.0 (19)

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Designer magnets containing cyanides and nitriles.

Authors:  J S Miller; J L Manson
Journal:  Acc Chem Res       Date:  2001-07       Impact factor: 22.384

3.  Ligand effects on the structures of extended networks of dicyanamide-containing transition-metal ions.

Authors:  Donatella Armentano; Giovanni De Munno; Francesca Guerra; Miguel Julve; Francesc Lloret
Journal:  Inorg Chem       Date:  2006-06-12       Impact factor: 5.165

  3 in total

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