Literature DB >> 21578652

Bis(2-ethoxy-carbonyl-ethyl-κC,O)(2-thioxo-1,3-dithiole-4,5-dithiol-ato-κS,S)tin(IV).

Geraldo M de Lima, Solange M S V Wardell, James L Wardell, Edward R T Tiekink.   

Abstract

In the title compound, [Sn(C(5)H(9)O(2))(2)(C(3)S(5))], the immediate environment around the Sn centre is defined by two S and two C atoms that define an approximately tetra-hedral geometry. The close approach of the pendant carbonyl O atoms [Sn-O = 2.577 (3) and 2.573 (3) Å] increases the coordination number to six. Supra-molecular chains are formed along the a axis in the crystal structure owing to the presence of C-H⋯O contacts.

Entities:  

Year:  2009        PMID: 21578652      PMCID: PMC2971863          DOI: 10.1107/S1600536809048971

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For original industrial inter­est in functionally substituted-alkyl-tin compounds, see: Lanigen & Weinberg (1976 ▶). For studies concerning the coordination chemistry of functionally substituted-alkyl-tin compounds, see: Harrison et al. (1979 ▶); Balasubramanian et al. (1997 ▶); Milne et al. (2005 ▶); Tian et al. (2005 ▶); de Lima et al. (2009 ▶). For related structures of functionally substituted-alkyl-tin compounds, see: Buchanan et al. (1996 ▶); Howie & Wardell, (2001 ▶). For the synthesis, see: Hutton & Oakes (1976 ▶); Valade et al. (1985 ▶).

Experimental

Crystal data

[Sn(C5H9O2)2(C3S5)] M = 517.26 Orthorhombic, a = 12.1224 (2) Å b = 13.3825 (2) Å c = 11.9228 (2) Å V = 1934.21 (5) Å3 Z = 4 Mo Kα radiation μ = 1.87 mm−1 T = 120 K 0.25 × 0.10 × 0.08 mm

Data collection

Bruker–Nonius 95mm CCD camera on κ-goniostat diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.025, T max = 0.052 14014 measured reflections 3895 independent reflections 3457 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.064 S = 1.04 3895 reflections 211 parameters 15 restraints H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.48 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809048971/im2162sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048971/im2162Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(C5H9O2)2(C3S5)]F(000) = 1032
Mr = 517.26Dx = 1.776 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71069 Å
Hall symbol: P 2c -2nCell parameters from 16139 reflections
a = 12.1224 (2) Åθ = 2.9–27.5°
b = 13.3825 (2) ŵ = 1.87 mm1
c = 11.9228 (2) ÅT = 120 K
V = 1934.21 (5) Å3Block, orange
Z = 40.25 × 0.10 × 0.08 mm
Bruker–Nonius 95mm CCD camera on κ-goniostat diffractometer3895 independent reflections
Radiation source: Bruker-Nonius FR591 rotating anode3457 reflections with I > 2σ(I)
graphiteRint = 0.056
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.0°
φ and ω scansh = −15→14
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)k = −17→17
Tmin = 0.025, Tmax = 0.052l = −13→15
14014 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0188P)2 + 0.7375P] where P = (Fo2 + 2Fc2)/3
3895 reflections(Δ/σ)max = 0.002
211 parametersΔρmax = 0.64 e Å3
15 restraintsΔρmin = −0.48 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sn0.529829 (17)0.337064 (17)0.45100 (3)0.02754 (8)
S10.53453 (8)0.51943 (8)0.41409 (10)0.0335 (3)
S20.73501 (8)0.33979 (7)0.46792 (12)0.0345 (3)
S30.88592 (8)0.51390 (8)0.48204 (9)0.0346 (3)
S40.72095 (7)0.66289 (7)0.43844 (12)0.0321 (2)
S50.94961 (10)0.72872 (9)0.49178 (10)0.0453 (3)
O10.5826 (3)0.1584 (2)0.5112 (3)0.0379 (7)
O20.6277 (3)0.0814 (3)0.6703 (3)0.0573 (10)
O30.3343 (2)0.3912 (2)0.3931 (2)0.0309 (6)
O40.2446 (2)0.4120 (2)0.2305 (2)0.0360 (7)
C10.6756 (3)0.5390 (3)0.4401 (4)0.0295 (9)
C20.7527 (3)0.4689 (3)0.4608 (5)0.0307 (8)
C30.8572 (3)0.6406 (3)0.4716 (4)0.0313 (10)
C40.4687 (4)0.3126 (4)0.6175 (4)0.0356 (11)
H4A0.46350.37730.65720.043*
H4B0.39380.28340.61340.043*
C50.5442 (4)0.2423 (4)0.6830 (4)0.0417 (11)
H5A0.60800.28070.71190.050*
H5B0.50330.21540.74830.050*
C60.5855 (4)0.1571 (3)0.6132 (4)0.0412 (11)
C70.6762 (6)0.0013 (4)0.6013 (5)0.0691 (19)
H7A0.72020.03130.53990.083*
H7B0.6164−0.03890.56710.083*
C80.7474 (5)−0.0643 (6)0.6694 (5)0.086 (2)
H8A0.8081−0.02500.70120.129*
H8B0.7776−0.11750.62200.129*
H8C0.7040−0.09390.73020.129*
C90.4905 (3)0.2620 (3)0.2973 (3)0.0314 (10)
H9A0.55930.24860.25520.038*
H9B0.45530.19700.31450.038*
C100.4131 (4)0.3238 (3)0.2247 (4)0.0367 (10)
H10A0.45690.37300.18170.044*
H10B0.37580.27920.17040.044*
C110.3272 (3)0.3782 (3)0.2923 (4)0.0301 (9)
C120.1619 (4)0.4726 (4)0.2870 (4)0.0392 (11)
H12A0.14680.44410.36210.047*
H12B0.09240.47100.24340.047*
C130.1992 (4)0.5781 (3)0.2994 (4)0.0445 (11)
H13A0.27060.57960.33790.067*
H13B0.14480.61560.34330.067*
H13C0.20680.60860.22500.067*
U11U22U33U12U13U23
Sn0.02877 (12)0.02691 (13)0.02694 (13)−0.00144 (10)0.00049 (14)−0.00137 (15)
S10.0284 (5)0.0272 (5)0.0451 (7)0.0013 (4)−0.0039 (4)0.0017 (4)
S20.0292 (4)0.0272 (5)0.0472 (9)0.0016 (4)−0.0027 (5)0.0020 (6)
S30.0289 (4)0.0381 (5)0.0368 (7)−0.0026 (4)−0.0014 (4)−0.0022 (5)
S40.0363 (4)0.0271 (4)0.0330 (7)−0.0037 (4)0.0001 (5)−0.0019 (5)
S50.0491 (6)0.0502 (7)0.0367 (6)−0.0208 (6)0.0015 (5)−0.0058 (6)
O10.0438 (18)0.0333 (16)0.0365 (19)0.0018 (13)−0.0047 (14)−0.0023 (13)
O20.075 (3)0.049 (2)0.048 (2)0.0012 (18)−0.0188 (18)0.0071 (18)
O30.0315 (13)0.0359 (16)0.0254 (16)0.0003 (13)−0.0035 (12)−0.0002 (13)
O40.0329 (15)0.0445 (19)0.0306 (18)0.0062 (14)−0.0022 (13)−0.0018 (15)
C10.0323 (17)0.0266 (17)0.030 (2)−0.0050 (15)−0.003 (2)0.001 (2)
C20.0297 (16)0.0280 (18)0.034 (2)−0.0046 (14)−0.002 (2)−0.009 (2)
C30.0352 (18)0.038 (2)0.021 (3)−0.0066 (16)0.0031 (17)0.0026 (19)
C40.039 (3)0.035 (3)0.032 (3)−0.0048 (19)0.0015 (18)−0.004 (2)
C50.051 (3)0.047 (3)0.027 (2)−0.010 (2)−0.001 (2)0.004 (2)
C60.042 (3)0.039 (3)0.043 (3)−0.014 (2)−0.005 (2)0.008 (2)
C70.092 (5)0.051 (4)0.065 (4)0.018 (3)−0.031 (4)−0.016 (3)
C80.069 (4)0.121 (7)0.069 (5)0.021 (4)−0.012 (3)−0.022 (4)
C90.034 (2)0.031 (2)0.029 (2)0.0001 (19)0.0013 (18)−0.002 (2)
C100.036 (2)0.046 (3)0.028 (2)0.006 (2)−0.003 (2)−0.003 (2)
C110.031 (2)0.027 (2)0.032 (3)0.0007 (18)−0.0012 (18)0.0004 (18)
C120.032 (2)0.048 (3)0.038 (3)0.007 (2)0.0047 (19)−0.002 (2)
C130.044 (3)0.038 (3)0.051 (3)0.005 (2)0.001 (2)0.006 (2)
Sn—C42.144 (5)C4—H4B0.9900
Sn—C92.144 (4)C5—C61.498 (7)
Sn—S12.4805 (11)C5—H5A0.9900
Sn—S22.4958 (9)C5—H5B0.9900
Sn—O32.573 (3)C7—C81.475 (4)
Sn—O12.577 (3)C7—H7A0.9900
S1—C11.758 (4)C7—H7B0.9900
S2—C21.743 (4)C8—H8A0.9800
S3—C31.735 (4)C8—H8B0.9800
S3—C21.742 (3)C8—H8C0.9800
S4—C31.724 (4)C9—C101.520 (6)
S4—C11.746 (4)C9—H9A0.9900
S5—C31.644 (4)C9—H9B0.9900
O1—C61.217 (5)C10—C111.505 (6)
O2—C61.324 (6)C10—H10A0.9900
O2—C71.474 (4)C10—H10B0.9900
O3—C111.217 (5)C12—C131.490 (6)
O4—C111.323 (5)C12—H12A0.9900
O4—C121.454 (5)C12—H12B0.9900
C1—C21.348 (5)C13—H13A0.9800
C4—C51.527 (6)C13—H13B0.9800
C4—H4A0.9900C13—H13C0.9800
C4—Sn—C9130.01 (17)H5A—C5—H5B107.8
C4—Sn—S1108.82 (14)O1—C6—O2122.4 (5)
C9—Sn—S1108.33 (12)O1—C6—C5122.3 (4)
C4—Sn—S2105.78 (12)O2—C6—C5115.2 (4)
C9—Sn—S2107.32 (11)O2—C7—C8111.0 (5)
S1—Sn—S288.68 (3)O2—C7—H7A109.4
C4—Sn—O388.46 (13)C8—C7—H7A109.4
C9—Sn—O372.38 (13)O2—C7—H7B109.4
S1—Sn—O372.34 (7)C8—C7—H7B109.4
S2—Sn—O3159.35 (7)H7A—C7—H7B108.0
C4—Sn—O171.72 (15)C7—C8—H8A109.5
C9—Sn—O181.87 (14)C7—C8—H8B109.5
S1—Sn—O1163.04 (7)H8A—C8—H8B109.5
S2—Sn—O175.14 (7)C7—C8—H8C109.5
O3—Sn—O1124.38 (9)H8A—C8—H8C109.5
C1—S1—Sn97.92 (13)H8B—C8—H8C109.5
C2—S2—Sn97.66 (11)C10—C9—Sn111.7 (3)
C3—S3—C298.14 (18)C10—C9—H9A109.3
C3—S4—C197.73 (18)Sn—C9—H9A109.3
C6—O1—Sn107.4 (3)C10—C9—H9B109.3
C6—O2—C7115.0 (4)Sn—C9—H9B109.3
C11—O3—Sn106.9 (2)H9A—C9—H9B108.0
C11—O4—C12117.1 (3)C11—C10—C9112.7 (4)
C2—C1—S4116.4 (3)C11—C10—H10A109.1
C2—C1—S1127.1 (3)C9—C10—H10A109.1
S4—C1—S1116.5 (2)C11—C10—H10B109.1
C1—C2—S3115.4 (3)C9—C10—H10B109.1
C1—C2—S2127.9 (3)H10A—C10—H10B107.8
S3—C2—S2116.7 (2)O3—C11—O4123.7 (4)
S5—C3—S4124.2 (2)O3—C11—C10123.2 (4)
S5—C3—S3123.6 (2)O4—C11—C10113.1 (4)
S4—C3—S3112.2 (2)O4—C12—C13111.4 (4)
C5—C4—Sn111.2 (3)O4—C12—H12A109.3
C5—C4—H4A109.4C13—C12—H12A109.3
Sn—C4—H4A109.4O4—C12—H12B109.3
C5—C4—H4B109.4C13—C12—H12B109.3
Sn—C4—H4B109.4H12A—C12—H12B108.0
H4A—C4—H4B108.0C12—C13—H13A109.5
C6—C5—C4112.6 (4)C12—C13—H13B109.5
C6—C5—H5A109.1H13A—C13—H13B109.5
C4—C5—H5A109.1C12—C13—H13C109.5
C6—C5—H5B109.1H13A—C13—H13C109.5
C4—C5—H5B109.1H13B—C13—H13C109.5
C4—Sn—S1—C199.3 (2)Sn—S2—C2—S3174.2 (3)
C9—Sn—S1—C1−114.8 (2)C1—S4—C3—S5−176.2 (3)
S2—Sn—S1—C1−6.96 (17)C1—S4—C3—S33.4 (3)
O3—Sn—S1—C1−178.67 (18)C2—S3—C3—S5176.1 (3)
O1—Sn—S1—C110.3 (3)C2—S3—C3—S4−3.5 (3)
C4—Sn—S2—C2−102.3 (2)C9—Sn—C4—C594.0 (3)
C9—Sn—S2—C2115.7 (2)S1—Sn—C4—C5−129.9 (3)
S1—Sn—S2—C26.90 (19)S2—Sn—C4—C5−35.8 (3)
O3—Sn—S2—C229.8 (3)O3—Sn—C4—C5159.3 (3)
O1—Sn—S2—C2−168.0 (2)O1—Sn—C4—C532.2 (3)
C4—Sn—O1—C6−24.6 (3)Sn—C4—C5—C6−40.7 (5)
C9—Sn—O1—C6−161.6 (3)Sn—O1—C6—O2−168.4 (4)
S1—Sn—O1—C670.1 (4)Sn—O1—C6—C59.8 (5)
S2—Sn—O1—C688.0 (3)C7—O2—C6—O13.0 (7)
O3—Sn—O1—C6−99.5 (3)C7—O2—C6—C5−175.4 (5)
C4—Sn—O3—C11−156.3 (3)C4—C5—C6—O117.7 (6)
C9—Sn—O3—C11−23.1 (3)C4—C5—C6—O2−163.9 (4)
S1—Sn—O3—C1193.4 (3)C6—O2—C7—C8164.1 (5)
S2—Sn—O3—C1169.3 (4)C4—Sn—C9—C10102.9 (4)
O1—Sn—O3—C11−89.7 (3)S1—Sn—C9—C10−33.2 (3)
C3—S4—C1—C2−2.0 (4)S2—Sn—C9—C10−127.7 (3)
C3—S4—C1—S1178.3 (3)O3—Sn—C9—C1030.6 (3)
Sn—S1—C1—C26.4 (5)O1—Sn—C9—C10160.7 (3)
Sn—S1—C1—S4−173.9 (2)Sn—C9—C10—C11−38.3 (4)
S4—C1—C2—S3−0.2 (5)Sn—O3—C11—O4−169.2 (3)
S1—C1—C2—S3179.5 (3)Sn—O3—C11—C109.5 (5)
S4—C1—C2—S2−179.9 (3)C12—O4—C11—O33.7 (6)
S1—C1—C2—S2−0.2 (7)C12—O4—C11—C10−175.2 (4)
C3—S3—C2—C12.3 (4)C9—C10—C11—O316.6 (6)
C3—S3—C2—S2−178.0 (3)C9—C10—C11—O4−164.6 (4)
Sn—S2—C2—C1−6.1 (5)C11—O4—C12—C1381.2 (5)
D—H···AD—HH···AD···AD—H···A
C12—H12a···O1i0.992.383.338 (6)164
C7—H7a···O3ii0.992.463.450 (7)178
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C12—H12a⋯O1i 0.992.383.338 (6)164
C7—H7a⋯O3ii 0.992.463.450 (7)178

Symmetry codes: (i) ; (ii) .

  2 in total

1.  Dichlorobis(4-methylpentan-2-onato-C4,O)tin(IV) and bis(4-methylpentan-2-onato-C4,O)(2-thioxo-1,3-dithiole-4,5-dithiolato-S,S')tin(IV) at 150 K.

Authors:  R A Howie; J L Wardell
Journal:  Acta Crystallogr C       Date:  2001-09-11       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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