Literature DB >> 21578624

Poly[[μ(2)-acetato-aquadi-μ(3)-isonicotinato-dysprosium(III)silver(I)] perchlorate].

Li-Cai Zhu1.   

Abstract

In the title three-dimensional heterometallic complex, {[AgDy(C(6)H(4)NO(2))(2)(C(2)H(3)O(2))(H(2)O)]ClO(4)}(n), the Dy(III) ion is eight-coordinated by four O atoms from four different isonicotinate ligands, three O atoms from two different acetate ligands and one O atom of water mol-ecule. The two-coordinate Ag(I) ion is bonded to two N atoms from two different isonicotinate anions. These metal coordination units are connected by bridging isonicotinate and acetate ligands, generating a three-dimensional network. The coordinated water mol-ecules link the carboxyl-ate group and the acetate ligand by O-H⋯O hydrogen bonding. The perchlorate anion is disordered over two sites with site occupancy factors 0.508 (12) and 0.492 (12) and the methyl group of the acetate ligand is disordered over two positions of equal occupancy.

Entities:  

Year:  2009        PMID: 21578624      PMCID: PMC2972040          DOI: 10.1107/S1600536809046637

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of lanthanide–transition metal heterometallic complexes with bridging multifunctional organic ligands in ion exchange, magnetism, bimetallic catalysis and as luminescent probes, see: Cheng et al. (2006 ▶); Kuang et al. (2007 ▶); Peng et al. (2008 ▶); Zhu et al. (2009 ▶).

Experimental

Crystal data

[AgDy(C6H4NO2)2(C2H3O2)(H2O)]ClO4 M = 691.08 Monoclinic, a = 16.1682 (15) Å b = 15.1020 (14) Å c = 7.9846 (7) Å β = 92.845 (1)° V = 1947.2 (3) Å3 Z = 4 Mo Kα radiation μ = 5.01 mm−1 T = 296 K 0.23 × 0.20 × 0.19 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.328, T max = 0.386 9904 measured reflections 3486 independent reflections 3112 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.056 S = 1.04 3486 reflections 322 parameters 158 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.66 e Å−3 Δρmin = −0.76 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809046637/zq2015sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809046637/zq2015Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[AgDy(C6H4NO2)2(C2H3O2)(H2O)]ClO4F(000) = 1316
Mr = 691.08Dx = 2.357 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5589 reflections
a = 16.1682 (15) Åθ = 2.7–27.8°
b = 15.1020 (14) ŵ = 5.01 mm1
c = 7.9846 (7) ÅT = 296 K
β = 92.845 (1)°Block, colorless
V = 1947.2 (3) Å30.23 × 0.20 × 0.19 mm
Z = 4
Bruker APEXII area-detector diffractometer3486 independent reflections
Radiation source: fine-focus sealed tube3112 reflections with I > 2σ(I)
graphiteRint = 0.025
φ and ω scanθmax = 25.2°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −15→19
Tmin = 0.328, Tmax = 0.386k = −18→17
9904 measured reflectionsl = −8→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.023Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.056H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0236P)2 + 3.5237P] where P = (Fo2 + 2Fc2)/3
3486 reflections(Δ/σ)max = 0.002
322 parametersΔρmax = 0.66 e Å3
158 restraintsΔρmin = −0.76 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Dy10.454540 (11)0.616178 (12)1.04948 (2)0.01852 (7)
Ag10.97316 (3)0.73989 (4)0.60071 (7)0.06665 (17)
O10.35829 (18)0.81592 (19)0.7190 (4)0.0300 (7)
O20.38143 (17)0.68117 (19)0.8281 (4)0.0263 (7)
O30.5762 (2)0.6330 (2)0.9080 (5)0.0401 (9)
O40.63060 (19)0.49745 (19)0.8632 (5)0.0403 (9)
O50.5347 (2)0.6149 (2)1.3147 (4)0.0360 (8)
O60.54781 (19)0.4970 (2)1.1607 (4)0.0320 (7)
O1W0.4979 (2)0.7687 (2)1.0758 (4)0.0358 (8)
H1W0.518 (3)0.795 (3)1.002 (6)0.054*
H2W0.475 (3)0.800 (3)1.139 (6)0.054*
N10.0943 (2)0.7527 (3)0.9981 (6)0.0404 (10)
N20.8576 (3)0.6967 (3)0.6991 (6)0.0500 (12)
C10.2516 (3)0.7494 (3)0.8695 (5)0.0231 (9)
C20.2116 (3)0.6710 (3)0.9112 (6)0.0312 (11)
H10.23720.61650.89670.037*
C30.1336 (3)0.6753 (3)0.9741 (7)0.0388 (12)
H20.10720.62291.00080.047*
C40.1333 (3)0.8284 (4)0.9589 (7)0.0446 (13)
H30.10680.88210.97600.054*
C50.2109 (3)0.8294 (3)0.8945 (6)0.0335 (11)
H40.23580.88280.86800.040*
C60.3367 (2)0.7495 (3)0.8008 (5)0.0202 (9)
C70.6332 (3)0.5809 (3)0.8637 (6)0.0303 (10)
C80.7113 (3)0.6231 (3)0.8058 (6)0.0293 (10)
C90.7156 (3)0.7123 (3)0.7613 (7)0.0410 (13)
H70.66930.74860.76680.049*
C100.7894 (3)0.7458 (4)0.7088 (8)0.0489 (15)
H80.79170.80530.67910.059*
C110.8533 (3)0.6108 (4)0.7457 (9)0.0568 (17)
H50.90090.57630.74270.068*
C120.7818 (3)0.5719 (3)0.7975 (7)0.0428 (13)
H60.78100.51230.82640.051*
C130.5697 (3)0.5411 (3)1.2898 (5)0.0276 (10)
C140.6271 (11)0.5015 (17)1.421 (3)0.045 (4)0.50
H14A0.67190.54181.44670.068*0.50
H14B0.64870.44681.38040.068*0.50
H14C0.59760.49051.52030.068*0.50
C14'0.6444 (10)0.5127 (17)1.393 (3)0.045 (4)0.50
H14D0.65030.54881.49150.068*0.50
H14E0.69260.51911.32820.068*0.50
H14F0.63850.45181.42460.068*0.50
Cl10.9165 (8)0.9620 (9)0.7618 (15)0.0633 (8)0.492 (12)
O70.9742 (9)0.8934 (9)0.785 (2)0.138 (7)0.492 (12)
O80.8752 (9)0.9496 (8)0.6037 (14)0.105 (5)0.492 (12)
O90.9544 (10)1.0465 (9)0.761 (2)0.074 (5)0.492 (12)
O100.8556 (9)0.9600 (10)0.8849 (19)0.139 (7)0.492 (12)
Cl1'0.9216 (7)0.9553 (8)0.7502 (15)0.0633 (8)0.508 (12)
O7'0.9307 (9)0.8895 (9)0.8748 (17)0.125 (6)0.508 (12)
O8'0.9565 (10)0.9226 (10)0.6054 (17)0.139 (6)0.508 (12)
O9'0.9612 (10)1.0334 (9)0.809 (2)0.090 (6)0.508 (12)
O10'0.8355 (6)0.9715 (7)0.720 (2)0.101 (5)0.508 (12)
U11U22U33U12U13U23
Dy10.01576 (11)0.01481 (11)0.02554 (12)0.00081 (7)0.00650 (8)0.00006 (8)
Ag10.0261 (2)0.0917 (4)0.0846 (4)−0.0148 (2)0.0267 (2)0.0028 (3)
O10.0256 (16)0.0230 (16)0.0424 (19)0.0016 (13)0.0128 (14)0.0096 (14)
O20.0190 (15)0.0247 (15)0.0357 (18)0.0039 (12)0.0055 (13)0.0049 (13)
O30.0302 (19)0.0227 (17)0.071 (3)−0.0018 (13)0.0332 (18)−0.0015 (16)
O40.0337 (18)0.0193 (16)0.070 (2)−0.0035 (14)0.0288 (17)−0.0028 (16)
O50.044 (2)0.0315 (18)0.0319 (18)0.0101 (15)−0.0040 (15)−0.0092 (14)
O60.0376 (18)0.0270 (16)0.0304 (17)0.0082 (14)−0.0078 (14)−0.0062 (14)
O1W0.049 (2)0.0228 (17)0.038 (2)−0.0094 (15)0.0213 (17)−0.0029 (14)
N10.023 (2)0.049 (3)0.051 (3)0.0021 (18)0.0138 (19)−0.003 (2)
N20.028 (2)0.050 (3)0.074 (3)−0.009 (2)0.022 (2)−0.002 (2)
C10.017 (2)0.028 (2)0.024 (2)0.0005 (17)0.0038 (17)0.0033 (17)
C20.020 (2)0.026 (2)0.049 (3)−0.0004 (18)0.011 (2)0.000 (2)
C30.025 (2)0.037 (3)0.056 (3)−0.006 (2)0.017 (2)−0.001 (2)
C40.033 (3)0.040 (3)0.062 (4)0.013 (2)0.014 (3)−0.002 (3)
C50.027 (2)0.025 (2)0.050 (3)0.0046 (19)0.012 (2)0.004 (2)
C60.016 (2)0.020 (2)0.024 (2)−0.0002 (16)0.0040 (17)0.0002 (17)
C70.023 (2)0.028 (2)0.041 (3)−0.0069 (19)0.016 (2)−0.001 (2)
C80.023 (2)0.026 (2)0.041 (3)−0.0048 (18)0.014 (2)−0.003 (2)
C90.025 (3)0.029 (3)0.070 (4)0.000 (2)0.017 (2)0.004 (2)
C100.032 (3)0.036 (3)0.081 (4)−0.010 (2)0.021 (3)0.007 (3)
C110.026 (3)0.047 (3)0.100 (5)0.000 (2)0.019 (3)−0.004 (3)
C120.027 (3)0.031 (3)0.073 (4)0.001 (2)0.017 (3)−0.001 (3)
C130.026 (2)0.032 (2)0.025 (2)0.0036 (19)−0.0008 (19)−0.0022 (19)
C140.046 (6)0.045 (5)0.044 (6)0.006 (5)−0.012 (5)−0.003 (4)
C14'0.046 (6)0.045 (5)0.044 (6)0.006 (5)−0.012 (5)−0.003 (4)
Cl10.0616 (15)0.0502 (16)0.0776 (16)0.0036 (11)−0.0019 (11)−0.0024 (12)
O70.145 (10)0.105 (8)0.162 (11)0.076 (7)−0.030 (8)−0.017 (7)
O80.132 (10)0.108 (8)0.072 (7)−0.039 (7)−0.042 (7)0.005 (6)
O90.068 (8)0.060 (7)0.094 (8)−0.011 (6)0.012 (6)−0.003 (6)
O100.135 (10)0.151 (10)0.136 (10)−0.038 (8)0.054 (8)−0.009 (8)
Cl1'0.0616 (15)0.0502 (16)0.0776 (16)0.0036 (11)−0.0019 (11)−0.0024 (12)
O7'0.140 (10)0.120 (9)0.112 (8)−0.019 (7)−0.017 (7)0.066 (7)
O8'0.163 (10)0.142 (9)0.119 (9)0.012 (8)0.063 (8)−0.035 (7)
O9'0.074 (8)0.082 (9)0.115 (10)−0.034 (7)0.006 (7)−0.038 (7)
O10'0.055 (6)0.088 (7)0.160 (10)0.004 (5)−0.008 (6)0.008 (7)
Dy1—O22.297 (3)C2—C31.382 (6)
Dy1—O4i2.328 (3)C2—H10.9300
Dy1—O32.330 (3)C3—H20.9300
Dy1—O1ii2.348 (3)C4—C51.380 (6)
Dy1—O6i2.394 (3)C4—H30.9300
Dy1—O1W2.414 (3)C5—H40.9300
Dy1—O52.428 (3)C7—C81.509 (6)
Dy1—O62.484 (3)C8—C121.381 (6)
Dy1—C132.842 (4)C8—C91.395 (6)
Dy1—Dy1i3.9005 (5)C9—C101.381 (6)
Ag1—N22.163 (4)C9—H70.9300
Ag1—N1iii2.163 (4)C10—H80.9300
O1—C61.256 (5)C11—C121.379 (7)
O1—Dy1iv2.348 (3)C11—H50.9300
O2—C61.272 (5)C12—H60.9300
O3—C71.275 (5)C13—C141.490 (9)
O4—C71.261 (5)C13—C14'1.490 (9)
O4—Dy1i2.328 (3)C14—H14A0.9600
O5—C131.269 (5)C14—H14B0.9600
O6—C131.263 (5)C14—H14C0.9600
O6—Dy1i2.394 (3)C14'—H14D0.9600
O1W—H1W0.79 (3)C14'—H14E0.9600
O1W—H2W0.79 (3)C14'—H14F0.9600
N1—C31.348 (6)Cl1—O71.399 (12)
N1—C41.350 (7)Cl1—O81.411 (12)
N1—Ag1v2.163 (4)Cl1—O91.416 (11)
N2—C101.335 (7)Cl1—O101.426 (12)
N2—C111.351 (7)Cl1'—O8'1.401 (12)
C1—C51.394 (6)Cl1'—O7'1.408 (12)
C1—C21.398 (6)Cl1'—O9'1.411 (11)
C1—C61.506 (5)Cl1'—O10'1.420 (11)
O2—Dy1—O4i104.83 (12)C2—C1—C6121.9 (4)
O2—Dy1—O389.71 (12)C3—C2—C1119.1 (4)
O4i—Dy1—O3138.72 (10)C3—C2—H1120.4
O2—Dy1—O1ii85.79 (11)C1—C2—H1120.4
O4i—Dy1—O1ii74.38 (10)N1—C3—C2122.6 (4)
O3—Dy1—O1ii146.22 (10)N1—C3—H2118.7
O2—Dy1—O6i77.05 (10)C2—C3—H2118.7
O4i—Dy1—O6i72.23 (11)N1—C4—C5122.6 (4)
O3—Dy1—O6i73.89 (11)N1—C4—H3118.7
O1ii—Dy1—O6i136.70 (11)C5—C4—H3118.7
O2—Dy1—O1W78.20 (12)C4—C5—C1119.2 (4)
O4i—Dy1—O1W148.29 (11)C4—C5—H4120.4
O3—Dy1—O1W71.91 (11)C1—C5—H4120.4
O1ii—Dy1—O1W74.40 (11)O1—C6—O2124.5 (4)
O6i—Dy1—O1W137.44 (11)O1—C6—C1118.2 (3)
O2—Dy1—O5155.05 (10)O2—C6—C1117.3 (3)
O4i—Dy1—O591.77 (13)O4—C7—O3126.4 (4)
O3—Dy1—O589.81 (13)O4—C7—C8116.7 (4)
O1ii—Dy1—O580.85 (11)O3—C7—C8116.9 (4)
O6i—Dy1—O5126.52 (10)C12—C8—C9118.5 (4)
O1W—Dy1—O577.96 (12)C12—C8—C7119.0 (4)
O2—Dy1—O6149.85 (10)C9—C8—C7122.5 (4)
O4i—Dy1—O673.52 (11)C10—C9—C8119.0 (5)
O3—Dy1—O674.95 (11)C10—C9—H7120.5
O1ii—Dy1—O6121.22 (11)C8—C9—H7120.5
O6i—Dy1—O673.84 (12)N2—C10—C9122.8 (5)
O1W—Dy1—O6119.46 (12)N2—C10—H8118.6
O5—Dy1—O652.70 (10)C9—C10—H8118.6
O2—Dy1—C13169.94 (11)N2—C11—C12123.1 (5)
O4i—Dy1—C1383.17 (13)N2—C11—H5118.4
O3—Dy1—C1380.23 (13)C12—C11—H5118.4
O1ii—Dy1—C13102.45 (12)C11—C12—C8118.8 (5)
O6i—Dy1—C13100.12 (12)C11—C12—H6120.6
O1W—Dy1—C1398.28 (13)C8—C12—H6120.6
O5—Dy1—C1326.41 (11)O6—C13—O5118.8 (4)
O6—Dy1—C1326.36 (11)O6—C13—C14120.1 (11)
O2—Dy1—Dy1i114.40 (7)O5—C13—C14120.6 (11)
O4i—Dy1—Dy1i68.41 (7)O6—C13—C14'119.0 (11)
O3—Dy1—Dy1i70.39 (7)O5—C13—C14'121.4 (12)
O1ii—Dy1—Dy1i140.97 (7)C14—C13—C14'15.6 (17)
O6i—Dy1—Dy1i37.71 (7)O6—C13—Dy160.8 (2)
O1W—Dy1—Dy1i139.94 (8)O5—C13—Dy158.3 (2)
O5—Dy1—Dy1i88.82 (7)C14—C13—Dy1177.5 (10)
O6—Dy1—Dy1i36.13 (7)C14'—C13—Dy1166.7 (9)
C13—Dy1—Dy1i62.43 (9)C13—C14—H14A109.5
N2—Ag1—N1iii165.40 (17)C13—C14—H14B109.5
C6—O1—Dy1iv149.1 (3)C13—C14—H14C109.5
C6—O2—Dy1138.1 (3)C13—C14'—H14D109.5
C7—O3—Dy1134.9 (3)C13—C14'—H14E109.5
C7—O4—Dy1i139.1 (3)H14D—C14'—H14E109.5
C13—O5—Dy195.3 (3)C13—C14'—H14F109.5
C13—O6—Dy1i160.5 (3)H14D—C14'—H14F109.5
C13—O6—Dy192.8 (3)H14E—C14'—H14F109.5
Dy1i—O6—Dy1106.16 (12)O7—Cl1—O8107.5 (10)
Dy1—O1W—H1W123 (4)O7—Cl1—O9112.5 (10)
Dy1—O1W—H2W119 (4)O8—Cl1—O9107.4 (10)
H1W—O1W—H2W113 (5)O7—Cl1—O10111.9 (11)
C3—N1—C4118.2 (4)O8—Cl1—O10107.5 (10)
C3—N1—Ag1v122.7 (3)O9—Cl1—O10109.7 (10)
C4—N1—Ag1v119.1 (3)O8'—Cl1'—O7'107.6 (10)
C10—N2—C11117.6 (4)O8'—Cl1'—O9'111.8 (10)
C10—N2—Ag1125.7 (4)O7'—Cl1'—O9'109.0 (10)
C11—N2—Ag1116.5 (3)O8'—Cl1'—O10'110.8 (10)
C5—C1—C2118.3 (4)O7'—Cl1'—O10'107.9 (10)
C5—C1—C6119.8 (4)O9'—Cl1'—O10'109.6 (10)
D—H···AD—HH···AD···AD—H···A
O1W—H2W···O2ii0.79 (3)2.21 (4)2.925 (4)150 (5)
O1W—H1W···O5iv0.79 (3)2.05 (4)2.813 (4)161 (5)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H2W⋯O2i 0.79 (3)2.21 (4)2.925 (4)150 (5)
O1W—H1W⋯O5ii 0.79 (3)2.05 (4)2.813 (4)161 (5)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Lanthanide-transition-metal sandwich framework comprising {Cu3} cluster pillars and layered networks of {Er36} wheels.

Authors:  Jian-Wen Cheng; Jie Zhang; Shou-Tian Zheng; Man-Bo Zhang; Guo-Yu Yang
Journal:  Angew Chem Int Ed Engl       Date:  2005-12-16       Impact factor: 15.336

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Poly[[di-μ(3)-nicotinato-μ(3)-oxalato-samarium(III)silver(I)] dihydrate].

Authors:  Li-Cai Zhu; Zhen-Gang Zhao; Shu-Juan Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-19
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.