Literature DB >> 21578563

Bis(μ-5-nitro-2-oxidobenzoato)bis-[triaqua-zinc(II)].

Qing-Shan Li1, Ma Yin, Hong Wei, Guang-Ju Zhou.   

Abstract

The title complex mol-ecule, [Zn(2)(C(7)H(3)NO(5))(2)(H(2)O)(6)], is a centrosymmetric dimer containing two zinc(II) cations with distorted octa-hedral geometries provided by the O atoms of three water mol-ecules and the two bridging bidentate 5-nitro-salicylate ligands. The separation between the metal centres in the dimer is 3.1790 (11) Å. The crystal structure is stabilized by O-H⋯O hydrogen bonds, one of which intra-dimeric, linking the dimers into a three-dimensional network.

Entities:  

Year:  2009        PMID: 21578563      PMCID: PMC2971764          DOI: 10.1107/S1600536809045607

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For examples of bonding modes exhibited by salicylate anions, see: Klug et al. (1958 ▶); Risannen et al. (1987 ▶); Charles et al. (1983 ▶); Jagner et al. (1976 ▶); Fu et al. (2005 ▶). For the crystal structures of 5-nitro­salicylate zinc(II) complexes, see: Tahir et al. (1997 ▶); Morgant et al. (2006 ▶); Erxleben (2001 ▶).

Experimental

Crystal data

[Zn2(C7H3NO5)2(H2O)6] M = 601.04 Monoclinic, a = 10.858 (3) Å b = 13.645 (3) Å c = 6.6367 (17) Å β = 91.887 (4)° V = 982.7 (4) Å3 Z = 2 Mo Kα radiation μ = 2.53 mm−1 T = 294 K 0.26 × 0.10 × 0.08 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.752, T max = 0.821 5435 measured reflections 2009 independent reflections 1418 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.088 S = 1.03 2009 reflections 154 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.55 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809045607/rz2375sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809045607/rz2375Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn2(C7H3NO5)2(H2O)6]F(000) = 608
Mr = 601.04Dx = 2.031 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1942 reflections
a = 10.858 (3) Åθ = 2.4–25.8°
b = 13.645 (3) ŵ = 2.53 mm1
c = 6.6367 (17) ÅT = 294 K
β = 91.887 (4)°Block, yellow-green
V = 982.7 (4) Å30.26 × 0.10 × 0.08 mm
Z = 2
Bruker SMART CCD area-detector diffractometer2009 independent reflections
Radiation source: fine-focus sealed tube1418 reflections with I > 2σ(I)
graphiteRint = 0.041
φ and ω scansθmax = 26.4°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2000)h = −13→13
Tmin = 0.752, Tmax = 0.821k = −17→12
5435 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.088H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0314P)2 + 1.0942P] where P = (Fo2 + 2Fc2)/3
2009 reflections(Δ/σ)max = 0.001
154 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.55 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.52129 (4)0.61159 (3)0.44189 (8)0.03665 (16)
O10.7644 (3)0.37686 (19)0.3938 (5)0.0555 (9)
O20.6145 (2)0.48166 (16)0.4439 (4)0.0310 (6)
O30.6603 (2)0.67583 (17)0.3118 (4)0.0364 (6)
O41.2058 (2)0.6122 (2)0.1104 (5)0.0506 (8)
O51.1653 (2)0.4656 (2)0.2105 (4)0.0393 (7)
O60.4498 (3)0.5753 (2)0.1270 (5)0.0564 (8)
H6A0.49330.58480.02490.068*
H6B0.37210.57660.10970.068*
O70.4029 (3)0.72837 (19)0.4384 (5)0.0507 (8)
H7B0.34000.70420.49310.061*
H7A0.39070.77240.35040.061*
O80.5896 (3)0.64083 (19)0.7437 (4)0.0493 (8)
H8A0.64120.59610.77160.059*
H8B0.61310.69970.75460.059*
N11.1340 (3)0.5505 (2)0.1763 (5)0.0333 (7)
C10.7233 (3)0.4611 (2)0.3858 (5)0.0271 (8)
C20.8053 (3)0.5409 (2)0.3128 (5)0.0242 (7)
C30.9258 (3)0.5143 (3)0.2764 (5)0.0273 (8)
H30.95030.44960.29690.033*
C41.0097 (3)0.5813 (3)0.2108 (5)0.0281 (8)
C50.9774 (3)0.6787 (3)0.1786 (6)0.0333 (9)
H5A1.03500.72360.13460.040*
C60.8604 (3)0.7068 (3)0.2126 (6)0.0336 (9)
H60.83870.77190.19050.040*
C70.7692 (3)0.6412 (2)0.2803 (5)0.0268 (8)
U11U22U33U12U13U23
Zn10.0288 (2)0.0205 (2)0.0615 (3)−0.00197 (18)0.01434 (19)−0.0010 (2)
O10.0525 (18)0.0247 (16)0.092 (2)0.0100 (12)0.0359 (17)0.0158 (15)
O20.0268 (13)0.0184 (12)0.0483 (17)−0.0017 (10)0.0091 (11)−0.0007 (11)
O30.0268 (14)0.0236 (13)0.0593 (19)0.0032 (10)0.0096 (12)0.0079 (12)
O40.0274 (14)0.0560 (19)0.069 (2)−0.0043 (14)0.0138 (13)0.0088 (16)
O50.0314 (14)0.0428 (17)0.0436 (17)0.0106 (12)0.0012 (12)0.0017 (13)
O60.0329 (16)0.076 (2)0.060 (2)−0.0017 (15)0.0045 (14)−0.0002 (17)
O70.0429 (17)0.0279 (16)0.082 (2)0.0012 (12)0.0102 (16)0.0103 (14)
O80.064 (2)0.0238 (14)0.061 (2)−0.0075 (13)0.0134 (15)−0.0095 (13)
N10.0264 (16)0.044 (2)0.0293 (18)−0.0002 (14)0.0000 (13)−0.0024 (14)
C10.0311 (19)0.0213 (18)0.029 (2)0.0013 (14)0.0042 (15)−0.0004 (14)
C20.0243 (17)0.0244 (18)0.0240 (19)−0.0004 (13)0.0021 (14)0.0008 (14)
C30.032 (2)0.0263 (19)0.023 (2)0.0022 (14)0.0015 (15)0.0017 (15)
C40.0221 (17)0.039 (2)0.023 (2)0.0008 (14)0.0012 (14)0.0003 (15)
C50.0287 (19)0.034 (2)0.037 (2)−0.0037 (15)0.0050 (16)0.0027 (17)
C60.035 (2)0.0226 (19)0.044 (2)0.0003 (15)0.0051 (17)0.0069 (16)
C70.0271 (18)0.0243 (18)0.029 (2)0.0021 (14)0.0036 (14)0.0015 (14)
Zn1—O31.969 (2)O7—H7A0.8457
Zn1—O22.041 (2)O8—H8A0.8452
Zn1—O72.047 (3)O8—H8B0.8448
Zn1—O2i2.107 (2)N1—C41.440 (4)
Zn1—O82.150 (3)C1—C21.497 (5)
Zn1—O62.260 (3)C2—C31.386 (5)
O1—C11.234 (4)C2—C71.439 (5)
O2—C11.285 (4)C3—C41.372 (5)
O3—C71.297 (4)C3—H30.9300
O4—N11.237 (4)C4—C51.389 (5)
O5—N11.226 (4)C5—C61.353 (5)
O6—H6A0.8486C5—H5A0.9300
O6—H6B0.8486C6—C71.418 (5)
O7—H7B0.8511C6—H60.9300
O3—Zn1—O290.14 (10)Zn1—O8—H8B110.5
O3—Zn1—O797.96 (11)H8A—O8—H8B118.1
O2—Zn1—O7170.84 (10)O5—N1—O4122.3 (3)
O3—Zn1—O2i169.08 (10)O5—N1—C4120.1 (3)
O2—Zn1—O2i79.97 (10)O4—N1—C4117.5 (3)
O7—Zn1—O2i91.59 (11)O1—C1—O2121.7 (3)
O3—Zn1—O894.59 (11)O1—C1—C2118.2 (3)
O2—Zn1—O889.95 (11)O2—C1—C2120.1 (3)
O7—Zn1—O893.63 (12)C3—C2—C7118.5 (3)
O2i—Zn1—O890.07 (10)C3—C2—C1116.2 (3)
O3—Zn1—O686.38 (11)C7—C2—C1125.4 (3)
O2—Zn1—O688.33 (11)C4—C3—C2121.4 (3)
O7—Zn1—O687.93 (12)C4—C3—H3119.3
O2i—Zn1—O688.69 (11)C2—C3—H3119.3
O8—Zn1—O6178.03 (11)C3—C4—C5121.3 (3)
C1—O2—Zn1130.4 (2)C3—C4—N1119.4 (3)
C1—O2—Zn1i129.6 (2)C5—C4—N1119.2 (3)
Zn1—O2—Zn1i100.03 (10)C6—C5—C4118.6 (3)
C7—O3—Zn1128.7 (2)C6—C5—H5A120.7
Zn1—O6—H6A121.5C4—C5—H5A120.7
Zn1—O6—H6B115.5C5—C6—C7122.9 (3)
H6A—O6—H6B117.7C5—C6—H6118.5
Zn1—O7—H7B101.9C7—C6—H6118.5
Zn1—O7—H7A130.2O3—C7—C6118.1 (3)
H7B—O7—H7A117.4O3—C7—C2124.6 (3)
Zn1—O8—H8A106.0C6—C7—C2117.3 (3)
O3—Zn1—O2—C12.4 (3)O2—C1—C2—C7−6.9 (5)
O2i—Zn1—O2—C1177.8 (4)C7—C2—C3—C40.0 (5)
O8—Zn1—O2—C1−92.1 (3)C1—C2—C3—C4−179.4 (3)
O6—Zn1—O2—C188.8 (3)C2—C3—C4—C50.1 (6)
O3—Zn1—O2—Zn1i−175.34 (12)C2—C3—C4—N1179.6 (3)
O2i—Zn1—O2—Zn1i0.0O5—N1—C4—C3−2.0 (5)
O8—Zn1—O2—Zn1i90.08 (11)O4—N1—C4—C3177.5 (3)
O6—Zn1—O2—Zn1i−88.96 (12)O5—N1—C4—C5177.5 (3)
O2—Zn1—O3—C7−8.9 (3)O4—N1—C4—C5−3.0 (5)
O7—Zn1—O3—C7175.4 (3)C3—C4—C5—C6−0.2 (6)
O2i—Zn1—O3—C7−33.9 (7)N1—C4—C5—C6−179.7 (3)
O8—Zn1—O3—C781.0 (3)C4—C5—C6—C70.2 (6)
O6—Zn1—O3—C7−97.2 (3)Zn1—O3—C7—C6−170.1 (3)
Zn1—O2—C1—O1−178.2 (3)Zn1—O3—C7—C28.7 (5)
Zn1i—O2—C1—O1−1.1 (5)C5—C6—C7—O3178.8 (4)
Zn1—O2—C1—C23.9 (5)C5—C6—C7—C2−0.1 (6)
Zn1i—O2—C1—C2−178.9 (2)C3—C2—C7—O3−178.8 (3)
O1—C1—C2—C3−5.5 (5)C1—C2—C7—O30.5 (6)
O2—C1—C2—C3172.4 (3)C3—C2—C7—C60.0 (5)
O1—C1—C2—C7175.2 (4)C1—C2—C7—C6179.3 (3)
D—H···AD—HH···AD···AD—H···A
O8—H8B···O3ii0.841.812.651 (3)173
O8—H8A···O5iii0.852.263.038 (4)153
O7—H7A···O8iv0.852.583.023 (4)114
O7—H7B···O1i0.851.772.596 (4)163
O6—H6B···O4v0.851.872.696 (4)164
O6—H6A···O8vi0.852.303.135 (5)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O8—H8B⋯O3i 0.841.812.651 (3)173
O8—H8A⋯O5ii 0.852.263.038 (4)153
O7—H7A⋯O8iii 0.852.583.023 (4)114
O7—H7B⋯O1iv 0.851.772.596 (4)163
O6—H6B⋯O4v 0.851.872.696 (4)164
O6—H6A⋯O8vi 0.852.303.135 (5)168

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Mono- and dinuclear zinc complexes derived from unsymmetric binucleating ligands: synthesis, characterization, and formation of tetranuclear arrays.

Authors:  A Erxleben
Journal:  Inorg Chem       Date:  2001-01-15       Impact factor: 5.165

  2 in total

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