Literature DB >> 21578519

N-{N-[5-(2,4-Dichloro-phen-yl)-1,3,4-thia-diazol-2-yl]carbamo-yl}-2,6-difluoro-benzamide.

Peng Wang1, Rong Wan, Feng Han, Yao Wang.   

Abstract

In the title compound, C(16)H(8)Cl(2)F(2)N(4)O(2)S, the thia-diazole ring makes dihedral angles of 24.94 (14) and 48.11 (14)°, respectively, with the dichloro- and difluoro-substituted benzene rings. An intra-molecular N-H⋯O hydrogen bond results in the formation of a planar (mean deviation 0.0091 Å) six-membered ring. In the crystal structure, mol-ecules form centrosymmetric dimers through pairs of inter-molecular N-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578519      PMCID: PMC2971195          DOI: 10.1107/S1600536809044584

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 1,3,4-thia­diazole aryl­urea derivatives, see: Hajjar & Casida (1978 ▶); Leighton et al. (1981 ▶); Metcalf et al. (1975 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C16H8Cl2F2N4O2S M = 429.22 Monoclinic, a = 8.1600 (16) Å b = 7.6100 (15) Å c = 27.102 (5) Å β = 92.42 (3)° V = 1681.5 (6) Å3 Z = 4 Mo Kα radiation μ = 0.55 mm−1 T = 293 K 0.30 × 0.20 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.852, T max = 0.898 5228 measured reflections 3053 independent reflections 2195 reflections with I > 2σ(I) R int = 0.034 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.122 S = 1.01 3053 reflections 244 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CAD-4 EXPRESS (Enraf-Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044584/is2477sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044584/is2477Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H8Cl2F2N4O2SF(000) = 864
Mr = 429.22Dx = 1.696 Mg m3
Monoclinic, P21/cMelting point: 498 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.1600 (16) ÅCell parameters from 25 reflections
b = 7.6100 (15) Åθ = 10–13°
c = 27.102 (5) ŵ = 0.55 mm1
β = 92.42 (3)°T = 293 K
V = 1681.5 (6) Å3Block, yellow
Z = 40.30 × 0.20 × 0.20 mm
Enraf–Nonius CAD-4 diffractometer2195 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.034
graphiteθmax = 25.3°, θmin = 1.5°
ω/2θ scansh = 0→9
Absorption correction: ψ scan (North et al., 1968)k = −4→9
Tmin = 0.852, Tmax = 0.898l = −32→32
5228 measured reflections3 standard reflections every 200 reflections
3053 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.07P)2] where P = (Fo2 + 2Fc2)/3
3053 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.24677 (10)0.99323 (10)0.44933 (3)0.0422 (2)
Cl10.07127 (15)1.02058 (11)0.34523 (3)0.0704 (3)
Cl2−0.13977 (11)1.65344 (11)0.29072 (3)0.0557 (3)
F10.6408 (2)0.7102 (3)0.70051 (7)0.0601 (5)
F20.4085 (3)0.2644 (2)0.60078 (7)0.0616 (5)
O10.3906 (3)0.7670 (3)0.63370 (8)0.0534 (6)
O20.3952 (3)0.6786 (3)0.48524 (7)0.0584 (7)
N10.4499 (3)0.6085 (3)0.56566 (8)0.0433 (6)
H1A0.49570.51310.55620.052*
N20.3126 (3)0.8663 (3)0.54369 (9)0.0419 (6)
H2A0.31020.88430.57500.050*
N30.1602 (3)1.1185 (3)0.53201 (9)0.0429 (6)
N40.0980 (3)1.2319 (3)0.49659 (9)0.0433 (6)
C10.6387 (4)0.2440 (5)0.71587 (13)0.0592 (10)
H1B0.67650.16020.73860.071*
C20.5527 (4)0.1908 (4)0.67364 (13)0.0526 (9)
H2B0.53240.07240.66750.063*
C30.4981 (4)0.3162 (4)0.64105 (11)0.0432 (7)
C40.5219 (3)0.4949 (4)0.64808 (10)0.0372 (7)
C50.6099 (4)0.5392 (4)0.69135 (11)0.0447 (8)
C60.6695 (4)0.4191 (5)0.72498 (12)0.0557 (9)
H6A0.72920.45460.75320.067*
C70.4482 (4)0.6364 (4)0.61606 (10)0.0390 (7)
C80.3853 (4)0.7180 (4)0.52848 (11)0.0417 (7)
C90.2414 (3)0.9916 (4)0.51268 (10)0.0363 (7)
C100.1319 (3)1.1852 (4)0.45196 (10)0.0359 (7)
C110.0728 (3)1.2949 (4)0.40993 (10)0.0366 (7)
C120.0397 (4)1.2367 (4)0.36183 (11)0.0381 (7)
C13−0.0232 (4)1.3465 (4)0.32543 (11)0.0425 (7)
H13A−0.04311.30520.29340.051*
C14−0.0561 (4)1.5183 (4)0.33714 (10)0.0395 (7)
C15−0.0260 (4)1.5824 (4)0.38409 (11)0.0481 (8)
H15A−0.04881.69880.39160.058*
C160.0386 (4)1.4703 (4)0.41965 (11)0.0455 (8)
H16A0.06011.51340.45140.055*
U11U22U33U12U13U23
S0.0482 (5)0.0403 (5)0.0384 (4)0.0116 (4)0.0050 (3)−0.0003 (3)
Cl10.1326 (9)0.0327 (5)0.0451 (5)0.0130 (5)−0.0047 (5)−0.0082 (4)
Cl20.0709 (6)0.0489 (5)0.0469 (5)0.0135 (4)−0.0026 (4)0.0082 (4)
F10.0674 (13)0.0525 (12)0.0589 (12)−0.0073 (10)−0.0146 (10)−0.0105 (9)
F20.0766 (14)0.0489 (12)0.0578 (12)−0.0075 (10)−0.0145 (10)−0.0106 (9)
O10.0714 (16)0.0449 (14)0.0436 (12)0.0189 (12)0.0004 (11)−0.0060 (10)
O20.0841 (17)0.0548 (15)0.0363 (12)0.0297 (13)0.0035 (11)−0.0017 (10)
N10.0530 (16)0.0385 (15)0.0382 (13)0.0141 (12)−0.0017 (11)−0.0005 (11)
N20.0498 (15)0.0402 (15)0.0354 (13)0.0098 (12)−0.0024 (11)−0.0021 (11)
N30.0494 (15)0.0373 (15)0.0415 (14)0.0091 (12)−0.0035 (12)−0.0026 (12)
N40.0510 (16)0.0396 (15)0.0390 (14)0.0107 (12)−0.0015 (12)−0.0031 (11)
C10.062 (2)0.064 (3)0.052 (2)0.0136 (19)−0.0012 (18)0.0170 (18)
C20.055 (2)0.0393 (19)0.064 (2)0.0022 (16)0.0085 (17)0.0071 (16)
C30.0423 (17)0.0447 (19)0.0427 (17)−0.0009 (15)0.0026 (13)−0.0031 (14)
C40.0361 (15)0.0392 (17)0.0363 (15)−0.0001 (13)0.0028 (12)−0.0007 (13)
C50.0415 (18)0.048 (2)0.0449 (17)−0.0003 (15)0.0009 (14)−0.0045 (15)
C60.055 (2)0.065 (2)0.0464 (19)0.0020 (18)−0.0079 (16)0.0048 (17)
C70.0402 (16)0.0381 (17)0.0386 (16)0.0004 (14)−0.0009 (13)−0.0042 (13)
C80.0433 (17)0.0418 (18)0.0399 (17)0.0086 (14)0.0011 (14)0.0004 (14)
C90.0378 (16)0.0343 (16)0.0365 (15)0.0011 (13)−0.0032 (12)−0.0050 (13)
C100.0385 (16)0.0279 (15)0.0410 (16)0.0011 (13)−0.0003 (13)−0.0042 (12)
C110.0399 (16)0.0315 (16)0.0387 (15)0.0019 (13)0.0052 (13)−0.0024 (13)
C120.0456 (17)0.0281 (16)0.0408 (16)0.0000 (13)0.0056 (13)−0.0062 (12)
C130.0507 (18)0.0406 (18)0.0360 (15)0.0008 (15)0.0001 (13)−0.0035 (14)
C140.0420 (17)0.0375 (18)0.0393 (16)0.0009 (14)0.0055 (13)0.0025 (13)
C150.069 (2)0.0321 (17)0.0429 (17)0.0119 (16)0.0016 (15)−0.0034 (14)
C160.063 (2)0.0365 (18)0.0368 (16)0.0031 (16)0.0006 (14)−0.0060 (13)
S—C91.719 (3)C1—H1B0.9300
S—C101.738 (3)C2—C31.362 (4)
Cl1—C121.727 (3)C2—H2B0.9300
Cl2—C141.742 (3)C3—C41.386 (4)
F1—C51.347 (4)C4—C51.390 (4)
F2—C31.347 (4)C4—C71.494 (4)
O1—C71.206 (3)C5—C61.365 (4)
O2—C81.216 (3)C6—H6A0.9300
N1—C71.383 (4)C10—C111.477 (4)
N1—C81.394 (4)C11—C161.391 (4)
N1—H1A0.8600C11—C121.393 (4)
N2—C81.348 (4)C12—C131.375 (4)
N2—C91.383 (4)C13—C141.375 (4)
N2—H2A0.8600C13—H13A0.9300
N3—C91.294 (3)C14—C151.375 (4)
N3—N41.372 (3)C15—C161.375 (4)
N4—C101.302 (4)C15—H15A0.9300
C1—C61.376 (5)C16—H16A0.9300
C1—C21.378 (5)
C9—S—C1085.91 (14)N1—C7—C4116.3 (3)
C7—N1—C8127.1 (3)O2—C8—N2123.3 (3)
C7—N1—H1A116.5O2—C8—N1120.7 (3)
C8—N1—H1A116.5N2—C8—N1115.9 (3)
C8—N2—C9124.8 (2)N3—C9—N2118.5 (2)
C8—N2—H2A117.6N3—C9—S115.7 (2)
C9—N2—H2A117.6N2—C9—S125.7 (2)
C9—N3—N4111.5 (2)N4—C10—C11119.1 (3)
C10—N4—N3113.0 (2)N4—C10—S113.8 (2)
C6—C1—C2121.1 (3)C11—C10—S127.1 (2)
C6—C1—H1B119.5C16—C11—C12116.7 (3)
C2—C1—H1B119.5C16—C11—C10117.3 (3)
C3—C2—C1118.3 (3)C12—C11—C10125.9 (3)
C3—C2—H2B120.9C13—C12—C11122.0 (3)
C1—C2—H2B120.9C13—C12—Cl1116.5 (2)
F2—C3—C2118.1 (3)C11—C12—Cl1121.4 (2)
F2—C3—C4117.8 (3)C12—C13—C14118.9 (3)
C2—C3—C4123.9 (3)C12—C13—H13A120.6
C3—C4—C5114.7 (3)C14—C13—H13A120.6
C3—C4—C7125.2 (3)C15—C14—C13121.5 (3)
C5—C4—C7119.8 (3)C15—C14—Cl2120.5 (2)
F1—C5—C6117.7 (3)C13—C14—Cl2118.0 (2)
F1—C5—C4118.4 (3)C14—C15—C16118.5 (3)
C6—C5—C4123.9 (3)C14—C15—H15A120.8
C5—C6—C1118.1 (3)C16—C15—H15A120.8
C5—C6—H6A121.0C15—C16—C11122.4 (3)
C1—C6—H6A121.0C15—C16—H16A118.8
O1—C7—N1122.6 (3)C11—C16—H16A118.8
O1—C7—C4121.2 (3)
C9—N3—N4—C101.1 (4)N4—N3—C9—S−1.6 (3)
C6—C1—C2—C3−0.2 (5)C8—N2—C9—N3172.6 (3)
C1—C2—C3—F2−177.4 (3)C8—N2—C9—S−5.9 (4)
C1—C2—C3—C4−0.9 (5)C10—S—C9—N31.2 (2)
F2—C3—C4—C5177.6 (3)C10—S—C9—N2179.8 (3)
C2—C3—C4—C51.0 (5)N3—N4—C10—C11180.0 (3)
F2—C3—C4—C73.7 (5)N3—N4—C10—S−0.2 (3)
C2—C3—C4—C7−172.8 (3)C9—S—C10—N4−0.5 (2)
C3—C4—C5—F1178.9 (3)C9—S—C10—C11179.3 (3)
C7—C4—C5—F1−6.9 (4)N4—C10—C11—C1623.2 (4)
C3—C4—C5—C6−0.1 (5)S—C10—C11—C16−156.5 (2)
C7—C4—C5—C6174.2 (3)N4—C10—C11—C12−153.1 (3)
F1—C5—C6—C1−179.9 (3)S—C10—C11—C1227.1 (4)
C4—C5—C6—C1−0.9 (5)C16—C11—C12—C130.2 (4)
C2—C1—C6—C51.1 (5)C10—C11—C12—C13176.6 (3)
C8—N1—C7—O1−1.6 (5)C16—C11—C12—Cl1−178.2 (2)
C8—N1—C7—C4178.2 (3)C10—C11—C12—Cl1−1.9 (4)
C3—C4—C7—O1136.8 (3)C11—C12—C13—C14−0.8 (5)
C5—C4—C7—O1−36.8 (4)Cl1—C12—C13—C14177.7 (2)
C3—C4—C7—N1−43.1 (4)C12—C13—C14—C150.6 (5)
C5—C4—C7—N1143.3 (3)C12—C13—C14—Cl2−178.7 (2)
C9—N2—C8—O2−0.3 (5)C13—C14—C15—C160.0 (5)
C9—N2—C8—N1179.9 (3)Cl2—C14—C15—C16179.3 (2)
C7—N1—C8—O2179.7 (3)C14—C15—C16—C11−0.6 (5)
C7—N1—C8—N2−0.5 (5)C12—C11—C16—C150.5 (5)
N4—N3—C9—N2179.8 (3)C10—C11—C16—C15−176.2 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.862.072.902 (3)164
N2—H2A···O10.861.922.607 (3)136
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O2i0.862.072.902 (3)164
N2—H2A⋯O10.861.922.607 (3)136

Symmetry code: (i) .

  4 in total

1.  Degradation and environmental fate of 1-(2,6-difluorobenzoly)-3-(4-chlorophenyl) urea.

Authors:  R L Metcalf; P Y Lu; S Bowlus
Journal:  J Agric Food Chem       Date:  1975 May-Jun       Impact factor: 5.279

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Pesticides: insecticides and fungicides are chitin synthesis inhibitors.

Authors:  T Leighton; E Marks; F Leighton
Journal:  Science       Date:  1981-08-21       Impact factor: 47.728

4.  Insecticidal benzoylphenyl ureas: structure-activity relationships as chitin synthesis inhibitors.

Authors:  N P Hajjar; J E Casida
Journal:  Science       Date:  1978-06-30       Impact factor: 47.728

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.