| Literature DB >> 21578473 |
Gui-Fa Su1, Zhong-Chang Wang, Wan-Yun Huang, Zhi-Xin Wang, Zi-Lu Chen.
Abstract
The title compound, C(20)H(20)ClNO(3), is a α-amino acid derivative which displays a Z configuration about the C=C double bond. The dihedral angle betwen the aromatic rings is 87.75 (12)°. The mol-ecular conformation is stabilized by an intra-molecular C-H⋯N hydrogen bond. In the crystal structure, centrosymmetrically related mol-ecules inter-act through inter-molecular C-H⋯O hydrogen-bond inter-actions, forming dimers. The dimers are further linked into chains parallel to the a axis by N-H⋯O hydrogen bonds. The methyl groups of the isopropyl group are disordered over two positions with occupancy factors of 0.5.Entities:
Year: 2009 PMID: 21578473 PMCID: PMC2970985 DOI: 10.1107/S1600536809043931
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H20ClNO3 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2536 reflections | |
| θ = 3.3–25.3° | |
| µ = 0.22 mm−1 | |
| α = 67.623 (11)° | |
| β = 83.991 (15)° | Block, colourless |
| γ = 79.548 (14)° | 0.50 × 0.40 × 0.25 mm |
| Rigaku AFC-7S Mercury diffractometer | 3380 independent reflections |
| Radiation source: fine-focus sealed tube | 2224 reflections with |
| graphite | |
| Detector resolution: 7.31 pixels mm-1 | θmax = 25.4°, θmin = 3.3° |
| ω scans | |
| Absorption correction: multi-scan (REQAB; Jacobson, 1998) | |
| 9082 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3380 reflections | (Δ/σ)max < 0.001 |
| 231 parameters | Δρmax = 0.40 e Å−3 |
| 5 restraints | Δρmin = −0.37 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cl1 | 1.2590 (3) | 0.91744 (12) | 0.10142 (11) | 0.1191 (6) | |
| O1 | 0.3603 (6) | 0.3847 (3) | 0.09779 (16) | 0.0827 (9) | |
| O2 | 0.4837 (5) | 0.2561 (2) | 0.23066 (16) | 0.0671 (7) | |
| O3 | 0.2050 (4) | 0.4200 (2) | 0.31239 (15) | 0.0632 (7) | |
| N1 | 0.6503 (5) | 0.4156 (2) | 0.27693 (15) | 0.0447 (7) | |
| H1 | 0.8097 | 0.4099 | 0.2946 | 0.054* | |
| C1 | 0.4725 (7) | 0.3599 (3) | 0.1656 (2) | 0.0535 (9) | |
| C2 | 0.6145 (6) | 0.4408 (3) | 0.18535 (19) | 0.0469 (8) | |
| C3 | 0.7106 (7) | 0.5258 (3) | 0.1182 (2) | 0.0512 (8) | |
| H3 | 0.6848 | 0.5267 | 0.0622 | 0.061* | |
| C4 | 0.8503 (7) | 0.6182 (3) | 0.1178 (2) | 0.0502 (8) | |
| C5 | 1.0086 (9) | 0.6722 (4) | 0.0447 (2) | 0.0761 (12) | |
| H5 | 1.0296 | 0.6466 | −0.0025 | 0.091* | |
| C6 | 1.1369 (10) | 0.7627 (4) | 0.0391 (3) | 0.0880 (14) | |
| H6 | 1.2450 | 0.7968 | −0.0107 | 0.106* | |
| C7 | 1.1039 (8) | 0.8020 (3) | 0.1076 (3) | 0.0712 (11) | |
| C8 | 0.9483 (10) | 0.7509 (4) | 0.1812 (3) | 0.0811 (13) | |
| H8 | 0.9275 | 0.7775 | 0.2279 | 0.097* | |
| C9 | 0.8221 (9) | 0.6602 (3) | 0.1863 (2) | 0.0709 (11) | |
| H9 | 0.7157 | 0.6261 | 0.2366 | 0.085* | |
| C10 | 0.4399 (6) | 0.4007 (3) | 0.33605 (19) | 0.0448 (8) | |
| C11 | 0.5016 (6) | 0.3597 (3) | 0.43160 (19) | 0.0476 (8) | |
| C12 | 0.7329 (8) | 0.2865 (3) | 0.4664 (2) | 0.0645 (10) | |
| H12 | 0.8642 | 0.2623 | 0.4298 | 0.077* | |
| C13 | 0.7701 (10) | 0.2483 (4) | 0.5579 (3) | 0.0851 (14) | |
| H13 | 0.9260 | 0.1981 | 0.5825 | 0.102* | |
| C14 | 0.5761 (11) | 0.2853 (5) | 0.6111 (3) | 0.0839 (14) | |
| H14 | 0.6008 | 0.2595 | 0.6718 | 0.101* | |
| C15 | 0.3528 (11) | 0.3577 (5) | 0.5768 (3) | 0.0859 (13) | |
| H15 | 0.2245 | 0.3834 | 0.6133 | 0.103* | |
| C16 | 0.3112 (8) | 0.3944 (4) | 0.4881 (2) | 0.0680 (11) | |
| H16 | 0.1523 | 0.4436 | 0.4652 | 0.082* | |
| C17 | 0.3195 (10) | 0.1773 (4) | 0.2212 (3) | 0.0856 (14) | |
| H17A | 0.3550 | 0.1721 | 0.1631 | 0.103* | |
| H17B | 0.1285 | 0.2063 | 0.2268 | 0.103* | |
| C18 | 0.3886 (8) | 0.0619 (4) | 0.2908 (3) | 0.0781 (12) | |
| H18 | 0.275 (6) | 0.012 (3) | 0.281 (2) | 0.073 (11)* | |
| C19 | 0.669 (2) | 0.0005 (11) | 0.3151 (8) | 0.107 (2)* | 0.50 |
| H19A | 0.7628 | 0.0472 | 0.3336 | 0.160* | 0.50 |
| H19B | 0.7638 | −0.0122 | 0.2646 | 0.160* | 0.50 |
| H19C | 0.6603 | −0.0729 | 0.3629 | 0.160* | 0.50 |
| C19' | 0.662 (2) | 0.0186 (11) | 0.2528 (8) | 0.107 (2)* | 0.50 |
| H19D | 0.7984 | 0.0599 | 0.2579 | 0.160* | 0.50 |
| H19E | 0.6450 | 0.0320 | 0.1913 | 0.160* | 0.50 |
| H19F | 0.7126 | −0.0632 | 0.2853 | 0.160* | 0.50 |
| C20 | 0.262 (2) | 0.0812 (11) | 0.3758 (7) | 0.101 (2)* | 0.50 |
| H20A | 0.2481 | 0.0073 | 0.4224 | 0.152* | 0.50 |
| H20B | 0.0847 | 0.1264 | 0.3638 | 0.152* | 0.50 |
| H20C | 0.3748 | 0.1218 | 0.3937 | 0.152* | 0.50 |
| C20' | 0.422 (2) | 0.0469 (11) | 0.3842 (7) | 0.101 (2)* | 0.50 |
| H20D | 0.4701 | −0.0342 | 0.4191 | 0.152* | 0.50 |
| H20E | 0.2546 | 0.0770 | 0.4076 | 0.152* | 0.50 |
| H20F | 0.5625 | 0.0883 | 0.3862 | 0.152* | 0.50 |
| Cl1 | 0.1242 (12) | 0.0830 (9) | 0.1589 (14) | −0.0548 (8) | −0.0204 (10) | −0.0333 (9) |
| O1 | 0.116 (2) | 0.088 (2) | 0.0517 (14) | −0.0472 (18) | −0.0216 (15) | −0.0154 (14) |
| O2 | 0.0817 (18) | 0.0547 (16) | 0.0676 (15) | −0.0262 (13) | −0.0179 (13) | −0.0148 (13) |
| O3 | 0.0374 (13) | 0.0924 (19) | 0.0553 (13) | −0.0180 (12) | −0.0059 (10) | −0.0178 (13) |
| N1 | 0.0384 (13) | 0.0568 (17) | 0.0390 (13) | −0.0168 (12) | −0.0038 (11) | −0.0129 (12) |
| C1 | 0.057 (2) | 0.059 (2) | 0.0469 (18) | −0.0184 (17) | −0.0037 (16) | −0.0170 (17) |
| C2 | 0.0462 (18) | 0.056 (2) | 0.0393 (16) | −0.0155 (15) | −0.0004 (13) | −0.0148 (15) |
| C3 | 0.057 (2) | 0.059 (2) | 0.0412 (16) | −0.0174 (17) | −0.0015 (14) | −0.0190 (16) |
| C4 | 0.0516 (19) | 0.052 (2) | 0.0432 (16) | −0.0101 (16) | −0.0044 (14) | −0.0117 (15) |
| C5 | 0.095 (3) | 0.078 (3) | 0.059 (2) | −0.039 (2) | 0.018 (2) | −0.024 (2) |
| C6 | 0.096 (3) | 0.086 (3) | 0.084 (3) | −0.051 (3) | 0.024 (2) | −0.025 (3) |
| C7 | 0.066 (2) | 0.056 (2) | 0.090 (3) | −0.018 (2) | −0.016 (2) | −0.017 (2) |
| C8 | 0.117 (4) | 0.062 (3) | 0.072 (3) | −0.030 (3) | −0.012 (3) | −0.024 (2) |
| C9 | 0.098 (3) | 0.063 (2) | 0.056 (2) | −0.034 (2) | 0.005 (2) | −0.0187 (18) |
| C10 | 0.0439 (18) | 0.0495 (19) | 0.0404 (16) | −0.0147 (15) | −0.0017 (14) | −0.0124 (14) |
| C11 | 0.0487 (19) | 0.051 (2) | 0.0432 (16) | −0.0219 (16) | −0.0031 (15) | −0.0103 (15) |
| C12 | 0.061 (2) | 0.069 (3) | 0.0494 (18) | −0.0140 (19) | −0.0051 (17) | −0.0045 (18) |
| C13 | 0.082 (3) | 0.087 (3) | 0.066 (2) | −0.024 (3) | −0.027 (2) | 0.004 (2) |
| C14 | 0.105 (4) | 0.103 (4) | 0.047 (2) | −0.054 (3) | −0.002 (2) | −0.016 (2) |
| C15 | 0.105 (4) | 0.103 (4) | 0.055 (2) | −0.029 (3) | 0.004 (2) | −0.031 (2) |
| C16 | 0.069 (2) | 0.085 (3) | 0.053 (2) | −0.015 (2) | 0.0020 (18) | −0.028 (2) |
| C17 | 0.104 (3) | 0.068 (3) | 0.092 (3) | −0.044 (3) | −0.022 (3) | −0.019 (2) |
| C18 | 0.067 (3) | 0.060 (3) | 0.112 (3) | −0.020 (2) | −0.014 (2) | −0.029 (2) |
| Cl1—C7 | 1.734 (4) | C13—C14 | 1.371 (7) |
| O1—C1 | 1.200 (4) | C13—H13 | 0.9300 |
| O2—C1 | 1.328 (4) | C14—C15 | 1.331 (7) |
| O2—C17 | 1.458 (4) | C14—H14 | 0.9300 |
| O3—C10 | 1.232 (4) | C15—C16 | 1.365 (5) |
| N1—C10 | 1.341 (4) | C15—H15 | 0.9300 |
| N1—C2 | 1.426 (4) | C16—H16 | 0.9300 |
| N1—H1 | 0.8600 | C17—C18 | 1.470 (6) |
| C1—C2 | 1.485 (5) | C17—H17A | 0.9700 |
| C2—C3 | 1.327 (4) | C17—H17B | 0.9700 |
| C3—C4 | 1.459 (5) | C18—C20' | 1.483 (10) |
| C3—H3 | 0.9300 | C18—C19 | 1.490 (10) |
| C4—C5 | 1.375 (5) | C18—C19' | 1.540 (11) |
| C4—C9 | 1.390 (5) | C18—C20 | 1.546 (10) |
| C5—C6 | 1.377 (6) | C18—H18 | 0.99 (3) |
| C5—H5 | 0.9300 | C19—H19A | 0.9600 |
| C6—C7 | 1.367 (6) | C19—H19B | 0.9600 |
| C6—H6 | 0.9300 | C19—H19C | 0.9600 |
| C7—C8 | 1.363 (6) | C19'—H19D | 0.9600 |
| C8—C9 | 1.375 (5) | C19'—H19E | 0.9600 |
| C8—H8 | 0.9300 | C19'—H19F | 0.9600 |
| C9—H9 | 0.9300 | C20—H20A | 0.9600 |
| C10—C11 | 1.489 (4) | C20—H20B | 0.9600 |
| C11—C12 | 1.367 (5) | C20—H20C | 0.9600 |
| C11—C16 | 1.386 (5) | C20'—H20D | 0.9600 |
| C12—C13 | 1.404 (5) | C20'—H20E | 0.9600 |
| C12—H12 | 0.9300 | C20'—H20F | 0.9600 |
| C1—O2—C17 | 116.2 (3) | C13—C14—H14 | 119.7 |
| C10—N1—C2 | 121.2 (2) | C14—C15—C16 | 120.3 (4) |
| C10—N1—H1 | 119.4 | C14—C15—H15 | 119.8 |
| C2—N1—H1 | 119.4 | C16—C15—H15 | 119.8 |
| O1—C1—O2 | 123.0 (3) | C15—C16—C11 | 121.1 (4) |
| O1—C1—C2 | 123.9 (3) | C15—C16—H16 | 119.4 |
| O2—C1—C2 | 113.1 (3) | C11—C16—H16 | 119.4 |
| C3—C2—N1 | 124.9 (3) | O2—C17—C18 | 108.7 (3) |
| C3—C2—C1 | 118.8 (3) | O2—C17—H17A | 110.0 |
| N1—C2—C1 | 116.2 (3) | C18—C17—H17A | 110.0 |
| C2—C3—C4 | 130.6 (3) | O2—C17—H17B | 110.0 |
| C2—C3—H3 | 114.7 | C18—C17—H17B | 110.0 |
| C4—C3—H3 | 114.7 | H17A—C17—H17B | 108.3 |
| C5—C4—C9 | 116.9 (3) | C17—C18—C20' | 122.0 (6) |
| C5—C4—C3 | 119.6 (3) | C17—C18—C19 | 125.4 (6) |
| C9—C4—C3 | 123.4 (3) | C20'—C18—C19 | 72.4 (7) |
| C4—C5—C6 | 122.2 (4) | C17—C18—C19' | 100.6 (6) |
| C4—C5—H5 | 118.9 | C20'—C18—C19' | 108.9 (7) |
| C6—C5—H5 | 118.9 | C17—C18—C20 | 102.6 (6) |
| C7—C6—C5 | 119.3 (4) | C19—C18—C20 | 104.4 (7) |
| C7—C6—H6 | 120.3 | C19'—C18—C20 | 140.7 (7) |
| C5—C6—H6 | 120.3 | C17—C18—H18 | 105 (2) |
| C8—C7—C6 | 120.3 (4) | C20'—C18—H18 | 117 (2) |
| C8—C7—Cl1 | 119.5 (3) | C19—C18—H18 | 112 (2) |
| C6—C7—Cl1 | 120.2 (3) | C19'—C18—H18 | 99 (2) |
| C7—C8—C9 | 119.9 (4) | C20—C18—H18 | 105 (2) |
| C7—C8—H8 | 120.0 | C18—C19—H19A | 109.5 |
| C9—C8—H8 | 120.0 | C18—C19—H19B | 109.5 |
| C8—C9—C4 | 121.4 (4) | C18—C19—H19C | 109.5 |
| C8—C9—H9 | 119.3 | C18—C19'—H19D | 109.5 |
| C4—C9—H9 | 119.3 | C18—C19'—H19E | 109.5 |
| O3—C10—N1 | 121.4 (3) | H19D—C19'—H19E | 109.5 |
| O3—C10—C11 | 121.2 (3) | C18—C19'—H19F | 109.5 |
| N1—C10—C11 | 117.3 (3) | H19D—C19'—H19F | 109.5 |
| C12—C11—C16 | 118.7 (3) | H19E—C19'—H19F | 109.5 |
| C12—C11—C10 | 123.0 (3) | C18—C20—H20A | 109.5 |
| C16—C11—C10 | 118.3 (3) | C18—C20—H20B | 109.5 |
| C11—C12—C13 | 119.3 (4) | C18—C20—H20C | 109.5 |
| C11—C12—H12 | 120.4 | C18—C20'—H20D | 109.5 |
| C13—C12—H12 | 120.4 | C18—C20'—H20E | 109.5 |
| C14—C13—C12 | 119.9 (4) | H20D—C20'—H20E | 109.5 |
| C14—C13—H13 | 120.1 | C18—C20'—H20F | 109.5 |
| C12—C13—H13 | 120.1 | H20D—C20'—H20F | 109.5 |
| C15—C14—C13 | 120.6 (4) | H20E—C20'—H20F | 109.5 |
| C15—C14—H14 | 119.7 | ||
| C17—O2—C1—O1 | −8.2 (5) | C3—C4—C9—C8 | −177.0 (4) |
| C17—O2—C1—C2 | 172.3 (3) | C2—N1—C10—O3 | −7.7 (5) |
| C10—N1—C2—C3 | 130.9 (4) | C2—N1—C10—C11 | 172.3 (3) |
| C10—N1—C2—C1 | −52.9 (4) | O3—C10—C11—C12 | 147.3 (4) |
| O1—C1—C2—C3 | −25.4 (5) | N1—C10—C11—C12 | −32.7 (5) |
| O2—C1—C2—C3 | 154.1 (3) | O3—C10—C11—C16 | −30.4 (5) |
| O1—C1—C2—N1 | 158.2 (3) | N1—C10—C11—C16 | 149.6 (3) |
| O2—C1—C2—N1 | −22.3 (4) | C16—C11—C12—C13 | 0.3 (5) |
| N1—C2—C3—C4 | −5.6 (6) | C10—C11—C12—C13 | −177.4 (3) |
| C1—C2—C3—C4 | 178.3 (3) | C11—C12—C13—C14 | −0.5 (6) |
| C2—C3—C4—C5 | 158.4 (4) | C12—C13—C14—C15 | −0.4 (7) |
| C2—C3—C4—C9 | −25.0 (6) | C13—C14—C15—C16 | 1.3 (7) |
| C9—C4—C5—C6 | 0.7 (6) | C14—C15—C16—C11 | −1.5 (7) |
| C3—C4—C5—C6 | 177.5 (4) | C12—C11—C16—C15 | 0.6 (6) |
| C4—C5—C6—C7 | −1.0 (7) | C10—C11—C16—C15 | 178.5 (3) |
| C5—C6—C7—C8 | 0.8 (7) | C1—O2—C17—C18 | 171.3 (3) |
| C5—C6—C7—Cl1 | −178.9 (4) | O2—C17—C18—C20' | 43.9 (8) |
| C6—C7—C8—C9 | −0.5 (7) | O2—C17—C18—C19 | −46.5 (8) |
| Cl1—C7—C8—C9 | 179.3 (3) | O2—C17—C18—C19' | −76.4 (6) |
| C7—C8—C9—C4 | 0.3 (7) | O2—C17—C18—C20 | 71.7 (6) |
| C5—C4—C9—C8 | −0.4 (6) |
| H··· | ||||
| C3—H3···O1i | 0.93 | 2.43 | 3.299 (4) | 155 |
| N1—H1···O3ii | 0.86 | 2.07 | 2.916 (3) | 169 |
| C9—H9···N1 | 0.93 | 2.55 | 3.103 (4) | 119 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3⋯O1i | 0.93 | 2.43 | 3.299 (4) | 155 |
| N1—H1⋯O3ii | 0.86 | 2.07 | 2.916 (3) | 169 |
| C9—H9⋯N1 | 0.93 | 2.55 | 3.103 (4) | 119 |
Symmetry codes: (i) ; (ii) .