| Literature DB >> 21578462 |
Hua Cai1, Ying Guo, Jian-Gang Li, Yao Wu.
Abstract
In the title mol-ecule, C(10)H(8)ClN(3)O(2), the dihedral angle between the pyridine and pyrazole rings is 64.01 (8)°. In the crystal structure, inter-molecular O-H⋯N hydrogen bonds link mol-ecules, forming extended chains along [001]. These chains are, in turn, linked by weak inter-molecular C-H⋯O inter-actions, forming a two-dimensional network perpendicular to the b axis.Entities:
Year: 2009 PMID: 21578462 PMCID: PMC2971182 DOI: 10.1107/S1600536809043906
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H8ClN3O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2ac | Cell parameters from 2602 reflections |
| θ = 3.1–27.5° | |
| µ = 0.33 mm−1 | |
| Block, colourless | |
| 0.24 × 0.20 × 0.18 mm |
| Bruker SMART APEXII CCD diffractometer | 1943 independent reflections |
| Radiation source: fine-focus sealed tube | 1754 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 5084 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1943 reflections | Δρmax = 0.14 e Å−3 |
| 147 parameters | Δρmin = −0.13 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983) 912 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.03 (7) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.19679 (9) | 0.18938 (6) | 0.13597 (6) | 0.0748 (2) | |
| O1 | 0.7978 (2) | 0.17726 (13) | 0.1372 (2) | 0.0622 (5) | |
| O2 | 0.6983 (2) | 0.34151 (14) | 0.05851 (17) | 0.0664 (5) | |
| H2 | 0.6504 | 0.2936 | 0.0186 | 0.100* | |
| N1 | 0.9622 (2) | 0.18043 (16) | 0.42451 (15) | 0.0446 (5) | |
| N2 | 0.9738 (2) | 0.33015 (15) | 0.29058 (16) | 0.0414 (4) | |
| N3 | 1.0231 (2) | 0.42331 (17) | 0.35467 (17) | 0.0490 (5) | |
| C1 | 1.1171 (3) | 0.1403 (2) | 0.26170 (19) | 0.0484 (6) | |
| C2 | 1.1532 (3) | 0.0288 (2) | 0.3012 (2) | 0.0606 (7) | |
| H2A | 1.2178 | −0.0224 | 0.2594 | 0.073* | |
| C3 | 1.0928 (3) | −0.0067 (2) | 0.4034 (3) | 0.0625 (7) | |
| H3 | 1.1145 | −0.0823 | 0.4314 | 0.075* | |
| C4 | 0.9994 (3) | 0.0727 (2) | 0.4629 (2) | 0.0544 (6) | |
| H4 | 0.9607 | 0.0501 | 0.5329 | 0.065* | |
| C5 | 1.0179 (2) | 0.21361 (19) | 0.32469 (18) | 0.0396 (5) | |
| C6 | 0.9573 (3) | 0.5193 (2) | 0.3074 (2) | 0.0502 (6) | |
| C7 | 0.8657 (3) | 0.4882 (2) | 0.2137 (2) | 0.0508 (6) | |
| H7 | 0.8092 | 0.5395 | 0.1668 | 0.061* | |
| C8 | 0.8758 (3) | 0.36675 (19) | 0.20469 (19) | 0.0421 (5) | |
| C9 | 0.9834 (4) | 0.6389 (2) | 0.3575 (3) | 0.0786 (9) | |
| H9A | 1.0755 | 0.6363 | 0.4066 | 0.118* | |
| H9B | 0.8889 | 0.6617 | 0.3992 | 0.118* | |
| H9C | 1.0026 | 0.6958 | 0.2991 | 0.118* | |
| C10 | 0.7890 (3) | 0.28386 (18) | 0.1310 (2) | 0.0435 (5) |
| Cl1 | 0.0825 (5) | 0.0840 (5) | 0.0578 (4) | 0.0041 (4) | 0.0284 (4) | −0.0126 (4) |
| O1 | 0.0816 (12) | 0.0439 (10) | 0.0612 (10) | −0.0104 (8) | −0.0217 (10) | 0.0019 (10) |
| O2 | 0.0833 (13) | 0.0539 (10) | 0.0618 (12) | −0.0028 (9) | −0.0294 (11) | 0.0010 (9) |
| N1 | 0.0460 (11) | 0.0480 (11) | 0.0399 (11) | −0.0015 (8) | 0.0012 (9) | 0.0004 (8) |
| N2 | 0.0477 (11) | 0.0391 (10) | 0.0376 (10) | −0.0016 (8) | 0.0009 (9) | −0.0041 (8) |
| N3 | 0.0497 (11) | 0.0477 (11) | 0.0496 (11) | −0.0037 (9) | −0.0004 (10) | −0.0108 (9) |
| C1 | 0.0471 (13) | 0.0541 (14) | 0.0441 (13) | 0.0011 (11) | 0.0002 (10) | −0.0101 (11) |
| C2 | 0.0564 (14) | 0.0555 (15) | 0.0701 (17) | 0.0155 (12) | −0.0069 (14) | −0.0158 (13) |
| C3 | 0.0659 (17) | 0.0482 (13) | 0.0734 (18) | 0.0074 (14) | −0.0155 (15) | 0.0052 (13) |
| C4 | 0.0598 (15) | 0.0549 (16) | 0.0484 (13) | −0.0030 (13) | −0.0059 (11) | 0.0096 (11) |
| C5 | 0.0368 (11) | 0.0429 (12) | 0.0391 (12) | −0.0007 (9) | −0.0034 (9) | −0.0053 (9) |
| C6 | 0.0511 (13) | 0.0416 (13) | 0.0578 (15) | −0.0040 (11) | 0.0021 (12) | −0.0096 (11) |
| C7 | 0.0562 (14) | 0.0425 (13) | 0.0539 (13) | 0.0012 (11) | −0.0029 (12) | 0.0017 (11) |
| C8 | 0.0451 (12) | 0.0438 (13) | 0.0373 (11) | −0.0019 (10) | 0.0012 (9) | −0.0007 (10) |
| C9 | 0.088 (2) | 0.0546 (16) | 0.093 (2) | 0.0004 (16) | −0.0138 (19) | −0.0207 (16) |
| C10 | 0.0493 (12) | 0.0425 (12) | 0.0386 (11) | −0.0034 (10) | 0.0030 (11) | 0.0035 (12) |
| Cl1—C1 | 1.729 (3) | C2—H2A | 0.9300 |
| O1—C10 | 1.202 (2) | C3—C4 | 1.376 (4) |
| O2—C10 | 1.314 (3) | C3—H3 | 0.9300 |
| O2—H2 | 0.8200 | C4—H4 | 0.9300 |
| N1—C4 | 1.330 (3) | C6—C7 | 1.394 (4) |
| N1—C5 | 1.331 (3) | C6—C9 | 1.486 (4) |
| N2—N3 | 1.359 (2) | C7—C8 | 1.371 (3) |
| N2—C8 | 1.369 (3) | C7—H7 | 0.9300 |
| N2—C5 | 1.418 (3) | C8—C10 | 1.468 (3) |
| N3—C6 | 1.333 (3) | C9—H9A | 0.9600 |
| C1—C2 | 1.371 (4) | C9—H9B | 0.9600 |
| C1—C5 | 1.383 (3) | C9—H9C | 0.9600 |
| C2—C3 | 1.377 (4) | ||
| C10—O2—H2 | 109.5 | C1—C5—N2 | 123.0 (2) |
| C4—N1—C5 | 118.9 (2) | N3—C6—C7 | 111.0 (2) |
| N3—N2—C8 | 111.56 (16) | N3—C6—C9 | 120.1 (2) |
| N3—N2—C5 | 118.17 (18) | C7—C6—C9 | 128.9 (2) |
| C8—N2—C5 | 130.08 (18) | C8—C7—C6 | 106.2 (2) |
| C6—N3—N2 | 105.21 (18) | C8—C7—H7 | 126.9 |
| C2—C1—C5 | 119.0 (2) | C6—C7—H7 | 126.9 |
| C2—C1—Cl1 | 120.47 (19) | N2—C8—C7 | 106.01 (19) |
| C5—C1—Cl1 | 120.49 (18) | N2—C8—C10 | 123.1 (2) |
| C1—C2—C3 | 119.4 (2) | C7—C8—C10 | 130.4 (2) |
| C1—C2—H2A | 120.3 | C6—C9—H9A | 109.5 |
| C3—C2—H2A | 120.3 | C6—C9—H9B | 109.5 |
| C4—C3—C2 | 118.2 (2) | H9A—C9—H9B | 109.5 |
| C4—C3—H3 | 120.9 | C6—C9—H9C | 109.5 |
| C2—C3—H3 | 120.9 | H9A—C9—H9C | 109.5 |
| N1—C4—C3 | 122.7 (3) | H9B—C9—H9C | 109.5 |
| N1—C4—H4 | 118.6 | O1—C10—O2 | 124.5 (2) |
| C3—C4—H4 | 118.6 | O1—C10—C8 | 124.4 (3) |
| N1—C5—C1 | 121.6 (2) | O2—C10—C8 | 111.10 (19) |
| N1—C5—N2 | 115.29 (19) | ||
| C8—N2—N3—C6 | −0.9 (2) | C8—N2—C5—C1 | 69.0 (3) |
| C5—N2—N3—C6 | −176.4 (2) | N2—N3—C6—C7 | 0.2 (3) |
| C5—C1—C2—C3 | −1.3 (3) | N2—N3—C6—C9 | 178.8 (2) |
| Cl1—C1—C2—C3 | 177.8 (2) | N3—C6—C7—C8 | 0.6 (3) |
| C1—C2—C3—C4 | −0.8 (4) | C9—C6—C7—C8 | −177.9 (3) |
| C5—N1—C4—C3 | −0.4 (4) | N3—N2—C8—C7 | 1.3 (2) |
| C2—C3—C4—N1 | 1.7 (4) | C5—N2—C8—C7 | 176.0 (2) |
| C4—N1—C5—C1 | −1.9 (3) | N3—N2—C8—C10 | −172.2 (2) |
| C4—N1—C5—N2 | −179.44 (19) | C5—N2—C8—C10 | 2.6 (4) |
| C2—C1—C5—N1 | 2.8 (3) | C6—C7—C8—N2 | −1.1 (2) |
| Cl1—C1—C5—N1 | −176.29 (17) | C6—C7—C8—C10 | 171.7 (2) |
| C2—C1—C5—N2 | −179.9 (2) | N2—C8—C10—O1 | −1.5 (4) |
| Cl1—C1—C5—N2 | 1.0 (3) | C7—C8—C10—O1 | −173.2 (3) |
| N3—N2—C5—N1 | 60.9 (3) | N2—C8—C10—O2 | 177.4 (2) |
| C8—N2—C5—N1 | −113.5 (3) | C7—C8—C10—O2 | 5.7 (4) |
| N3—N2—C5—C1 | −116.5 (2) |
| H··· | ||||
| O2—H2···N1i | 0.82 | 1.93 | 2.755 (3) | 180 |
| C2—H2A···O1ii | 0.93 | 2.36 | 3.258 (4) | 161 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯N1i | 0.82 | 1.93 | 2.755 (3) | 180 |
| C2—H2 | 0.93 | 2.36 | 3.258 (4) | 161 |
Symmetry codes: (i) ; (ii) .