Literature DB >> 21578437

Bis(2,6-dicarboxy-pyridinium) dichloride acetone monosolvate.

Cuong Quoc Ton, Michael Bolte.   

Abstract

The title compound, 2C(7)H(6)NO(4) (+)·2Cl(-)·C(3)H(6)O, crystallizes with two 2,6-dicarboxy-pyridinium cations, two chloride anions and one acetone mol-ecule in the asymmetric unit. The crystal structure is characterized by alternating cations and by Cl(-) anions, forming zigzag chains running along the a axis.

Entities:  

Year:  2009        PMID: 21578437      PMCID: PMC2971198          DOI: 10.1107/S1600536809043220

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For co-crystallization experiments, see: Ton & Bolte (2005 ▶); Tutughamiarso et al. (2009 ▶).

Experimental

Crystal data

2C7H6NO4 +·2Cl−·C3H6O M = 465.23 Monoclinic, a = 21.108 (4) Å b = 6.7877 (14) Å c = 15.224 (3) Å β = 110.28 (3)° V = 2046.0 (7) Å3 Z = 4 Mo Kα radiation μ = 0.37 mm−1 T = 173 K 0.30 × 0.20 × 0.20 mm

Data collection

Stoe IPDSII two-circle diffractometer Absorption correction: multi-scan (MULABS; Spek, 2003 ▶; Blessing, 1995 ▶) T min = 0.897, T max = 0.930 27731 measured reflections 3867 independent reflections 3412 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.082 S = 1.07 3867 reflections 277 parameters 2 restraints H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.33 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809043220/ng2671sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809043220/ng2671Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C7H6NO4+·2Cl·C3H6OF(000) = 960
Mr = 465.23Dx = 1.510 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 4736 reflections
a = 21.108 (4) Åθ = 3.6–23.9°
b = 6.7877 (14) ŵ = 0.37 mm1
c = 15.224 (3) ÅT = 173 K
β = 110.28 (3)°Block, colourless
V = 2046.0 (7) Å30.30 × 0.20 × 0.20 mm
Z = 4
Stoe IPDSII two-circle diffractometer3867 independent reflections
Radiation source: fine-focus sealed tube3412 reflections with I > 2σ(I)
graphiteRint = 0.041
ω scansθmax = 25.7°, θmin = 2.7°
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995)h = −25→25
Tmin = 0.897, Tmax = 0.930k = −8→8
27731 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0611P)2] where P = (Fo2 + 2Fc2)/3
3867 reflections(Δ/σ)max = 0.001
277 parametersΔρmax = 0.17 e Å3
2 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl20.400074 (15)0.86812 (5)0.57272 (2)0.02093 (10)
N10.86727 (6)0.62429 (16)0.08751 (8)0.0176 (2)
H1N0.84610.60940.02690.021*
O10.72464 (5)0.5375 (2)0.15456 (8)0.0373 (3)
O20.74328 (5)0.47101 (18)0.02079 (7)0.0314 (3)
H20.70200.44210.00030.047*
O31.02593 (5)0.77466 (16)0.07980 (7)0.0269 (2)
H31.04200.78920.03690.040*
O40.93315 (5)0.66689 (17)−0.03641 (7)0.0312 (3)
C10.93284 (6)0.67693 (19)0.11849 (9)0.0185 (3)
C20.96772 (7)0.6960 (2)0.21350 (10)0.0225 (3)
H2A1.01440.72890.23580.027*
C30.93390 (8)0.6665 (2)0.27580 (10)0.0259 (3)
H3A0.95720.67930.34130.031*
C40.86538 (7)0.6179 (2)0.24171 (10)0.0234 (3)
H40.84120.60160.28350.028*
C50.83310 (7)0.59365 (19)0.14648 (9)0.0194 (3)
C60.76021 (7)0.5313 (2)0.10756 (10)0.0224 (3)
C70.96393 (7)0.7065 (2)0.04423 (9)0.0210 (3)
C110.55437 (6)0.66485 (18)0.39734 (9)0.0170 (3)
C120.52686 (7)0.65541 (19)0.30102 (9)0.0194 (3)
H12A0.48040.68300.26950.023*
C130.56847 (7)0.6047 (2)0.25084 (9)0.0220 (3)
H130.55050.60100.18440.026*
C140.63629 (7)0.5591 (2)0.29749 (9)0.0202 (3)
H14A0.66470.52350.26350.024*
C150.66136 (6)0.56671 (19)0.39429 (9)0.0173 (3)
C160.73154 (6)0.51806 (19)0.45933 (9)0.0201 (3)
C170.51949 (6)0.71815 (19)0.46516 (9)0.0189 (3)
N20.62003 (6)0.62153 (15)0.43989 (7)0.0162 (2)
H2N0.63700.62960.50140.019*
O110.74741 (5)0.55571 (16)0.54219 (7)0.0281 (2)
O120.76850 (5)0.43135 (16)0.41724 (7)0.0260 (2)
H120.80640.40330.45680.039*
O130.54906 (5)0.69891 (16)0.54842 (7)0.0269 (2)
O140.45750 (5)0.78176 (16)0.42371 (7)0.0244 (2)
H140.44000.80750.46430.037*
O300.77087 (6)0.63026 (17)0.86620 (9)0.0391 (3)
C310.81624 (8)0.4065 (2)0.78336 (11)0.0325 (3)
H31A0.85980.45230.82710.049*
H31B0.81390.43250.71900.049*
H31C0.81180.26460.79170.049*
C320.76014 (7)0.5135 (2)0.80203 (11)0.0271 (3)
C330.68937 (8)0.4701 (3)0.73731 (13)0.0398 (4)
H33A0.65970.45380.77410.060*
H33B0.68930.34880.70240.060*
H33C0.67300.57970.69330.060*
Cl10.903216 (16)0.33503 (5)0.55619 (2)0.02480 (11)
U11U22U33U12U13U23
Cl20.01679 (17)0.02369 (18)0.02316 (18)0.00153 (11)0.00802 (13)0.00127 (12)
N10.0179 (5)0.0192 (5)0.0153 (5)0.0008 (4)0.0052 (4)−0.0010 (4)
O10.0271 (6)0.0621 (8)0.0297 (6)−0.0071 (5)0.0188 (5)−0.0038 (5)
O20.0185 (5)0.0508 (7)0.0265 (6)−0.0076 (5)0.0098 (4)−0.0110 (5)
O30.0157 (5)0.0409 (6)0.0248 (5)−0.0049 (4)0.0080 (4)−0.0054 (4)
O40.0253 (5)0.0496 (7)0.0185 (5)−0.0122 (5)0.0074 (4)−0.0023 (4)
C10.0176 (6)0.0170 (6)0.0206 (7)0.0017 (5)0.0064 (5)−0.0001 (5)
C20.0196 (6)0.0250 (7)0.0207 (7)0.0006 (5)0.0042 (5)−0.0020 (5)
C30.0285 (7)0.0303 (7)0.0164 (7)0.0018 (6)0.0047 (6)−0.0015 (5)
C40.0275 (7)0.0262 (7)0.0191 (7)0.0017 (5)0.0115 (6)0.0005 (5)
C50.0215 (7)0.0174 (6)0.0214 (7)0.0026 (5)0.0100 (5)0.0012 (5)
C60.0222 (7)0.0246 (7)0.0222 (7)0.0008 (5)0.0101 (5)0.0018 (5)
C70.0179 (6)0.0233 (7)0.0215 (7)−0.0013 (5)0.0065 (5)−0.0008 (5)
C110.0175 (6)0.0152 (6)0.0188 (6)−0.0004 (5)0.0071 (5)−0.0003 (5)
C120.0192 (6)0.0187 (6)0.0184 (6)−0.0003 (5)0.0039 (5)0.0011 (5)
C130.0278 (7)0.0220 (7)0.0156 (6)−0.0015 (5)0.0070 (5)0.0001 (5)
C140.0242 (7)0.0201 (6)0.0194 (6)−0.0006 (5)0.0117 (5)−0.0003 (5)
C150.0186 (6)0.0146 (6)0.0202 (6)−0.0011 (5)0.0087 (5)−0.0005 (5)
C160.0196 (6)0.0196 (6)0.0219 (7)0.0005 (5)0.0082 (5)−0.0003 (5)
C170.0178 (6)0.0201 (7)0.0193 (6)0.0007 (5)0.0071 (5)−0.0005 (5)
N20.0176 (5)0.0174 (5)0.0132 (5)0.0004 (4)0.0047 (4)−0.0013 (4)
O110.0214 (5)0.0392 (6)0.0211 (5)0.0048 (4)0.0038 (4)−0.0057 (4)
O120.0197 (5)0.0340 (6)0.0248 (5)0.0084 (4)0.0083 (4)0.0002 (4)
O130.0241 (5)0.0399 (6)0.0174 (5)0.0069 (4)0.0081 (4)−0.0004 (4)
O140.0188 (5)0.0342 (6)0.0217 (5)0.0062 (4)0.0091 (4)0.0019 (4)
O300.0382 (6)0.0362 (6)0.0452 (7)−0.0022 (5)0.0175 (5)−0.0108 (5)
C310.0323 (8)0.0324 (8)0.0326 (8)0.0014 (6)0.0111 (7)−0.0022 (7)
C320.0305 (7)0.0229 (7)0.0288 (8)−0.0012 (6)0.0115 (6)0.0049 (6)
C330.0292 (8)0.0443 (10)0.0429 (10)0.0012 (7)0.0087 (7)−0.0006 (8)
Cl10.01629 (17)0.02919 (19)0.0289 (2)0.00156 (12)0.00780 (14)−0.00016 (13)
N1—C11.3467 (17)C13—C141.394 (2)
N1—C51.3484 (18)C13—H130.9500
N1—H1N0.8800C14—C151.3834 (19)
O1—C61.2040 (18)C14—H14A0.9500
O2—C61.3087 (18)C15—N21.3421 (17)
O2—H20.8400C15—C161.5057 (18)
O3—C71.3147 (17)C16—O111.2149 (17)
O3—H30.8400C16—O121.3085 (17)
O4—C71.2036 (17)C17—O131.2103 (17)
C1—C21.3829 (19)C17—O141.3132 (16)
C1—C71.5045 (19)N2—H2N0.8800
C2—C31.385 (2)O12—H120.8400
C2—H2A0.9500O14—H140.8400
C3—C41.396 (2)O30—C321.2167 (19)
C3—H3A0.9500C31—C321.498 (2)
C4—C51.381 (2)C31—H31A0.9800
C4—H40.9500C31—H31B0.9800
C5—C61.5052 (19)C31—H31C0.9800
C11—N21.3433 (17)C32—C331.506 (2)
C11—C121.3790 (19)C33—H33A0.9800
C11—C171.5052 (18)C33—H33B0.9800
C12—C131.392 (2)C33—H33C0.9800
C12—H12A0.9500
C1—N1—C5121.98 (11)C14—C13—H13119.8
C1—N1—H1N119.0C15—C14—C13118.71 (12)
C5—N1—H1N119.0C15—C14—H14A120.6
C6—O2—H2109.5C13—C14—H14A120.6
C7—O3—H3109.5N2—C15—C14118.96 (12)
N1—C1—C2120.07 (13)N2—C15—C16112.85 (11)
N1—C1—C7115.80 (12)C14—C15—C16128.19 (12)
C2—C1—C7124.11 (12)O11—C16—O12127.34 (12)
C1—C2—C3119.26 (13)O11—C16—C15119.41 (12)
C1—C2—H2A120.4O12—C16—C15113.22 (12)
C3—C2—H2A120.4O13—C17—O14127.23 (12)
C2—C3—C4119.53 (13)O13—C17—C11119.68 (12)
C2—C3—H3A120.2O14—C17—C11113.10 (11)
C4—C3—H3A120.2C15—N2—C11123.93 (11)
C5—C4—C3119.25 (13)C15—N2—H2N118.0
C5—C4—H4120.4C11—N2—H2N118.0
C3—C4—H4120.4C16—O12—H12109.5
N1—C5—C4119.83 (12)C17—O14—H14109.5
N1—C5—C6119.40 (12)C32—C31—H31A109.5
C4—C5—C6120.77 (13)C32—C31—H31B109.5
O1—C6—O2127.04 (13)H31A—C31—H31B109.5
O1—C6—C5121.27 (13)C32—C31—H31C109.5
O2—C6—C5111.69 (12)H31A—C31—H31C109.5
O4—C7—O3127.38 (13)H31B—C31—H31C109.5
O4—C7—C1120.99 (12)O30—C32—C31121.94 (14)
O3—C7—C1111.63 (12)O30—C32—C33121.25 (15)
N2—C11—C12119.10 (12)C31—C32—C33116.81 (14)
N2—C11—C17112.96 (11)C32—C33—H33A109.5
C12—C11—C17127.94 (12)C32—C33—H33B109.5
C11—C12—C13118.80 (12)H33A—C33—H33B109.5
C11—C12—H12A120.6C32—C33—H33C109.5
C13—C12—H12A120.6H33A—C33—H33C109.5
C12—C13—C14120.46 (12)H33B—C33—H33C109.5
C12—C13—H13119.8
C5—N1—C1—C21.76 (19)N2—C11—C12—C13−1.17 (19)
C5—N1—C1—C7−179.77 (12)C17—C11—C12—C13179.30 (12)
N1—C1—C2—C3−2.1 (2)C11—C12—C13—C141.71 (19)
C7—C1—C2—C3179.60 (13)C12—C13—C14—C15−0.4 (2)
C1—C2—C3—C40.1 (2)C13—C14—C15—N2−1.37 (19)
C2—C3—C4—C52.1 (2)C13—C14—C15—C16177.90 (12)
C1—N1—C5—C40.54 (19)N2—C15—C16—O11−9.64 (18)
C1—N1—C5—C6−178.85 (11)C14—C15—C16—O11171.05 (13)
C3—C4—C5—N1−2.5 (2)N2—C15—C16—O12168.43 (11)
C3—C4—C5—C6176.92 (12)C14—C15—C16—O12−10.9 (2)
N1—C5—C6—O1−166.16 (14)N2—C11—C17—O13−7.56 (18)
C4—C5—C6—O114.5 (2)C12—C11—C17—O13172.00 (13)
N1—C5—C6—O214.67 (18)N2—C11—C17—O14172.82 (11)
C4—C5—C6—O2−164.72 (13)C12—C11—C17—O14−7.62 (19)
N1—C1—C7—O4−6.70 (19)C14—C15—N2—C112.01 (19)
C2—C1—C7—O4171.71 (14)C16—C15—N2—C11−177.37 (11)
N1—C1—C7—O3174.26 (11)C12—C11—N2—C15−0.71 (19)
C2—C1—C7—O3−7.33 (19)C17—C11—N2—C15178.89 (11)
D—H···AD—HH···AD···AD—H···A
O2—H2···Cl2i0.842.112.9469 (13)171
O3—H3···Cl1ii0.842.142.9727 (13)172
O12—H12···Cl10.842.132.9696 (15)179
O14—H14···Cl20.842.142.9775 (12)177
N1—H1N···O30iii0.882.423.277 (2)166
N1—H1N···O20.882.342.6685 (16)103
N1—H1N···O40.882.392.7195 (16)103
N2—H2N···O110.882.252.6365 (17)106
N2—H2N···O130.882.262.6392 (16)106
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2⋯Cl2i0.842.112.9469 (13)171
O3—H3⋯Cl1ii0.842.142.9727 (13)172
O12—H12⋯Cl10.842.132.9696 (15)179
O14—H14⋯Cl20.842.142.9775 (12)177
N1—H1N⋯O30iii0.882.423.277 (2)166
N1—H1N⋯O20.882.342.6685 (16)103
N1—H1N⋯O40.882.392.7195 (16)103
N2—H2N⋯O110.882.252.6365 (17)106
N2—H2N⋯O130.882.262.6392 (16)106

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  New pseudopolymorphs of 5-fluorocytosine.

Authors:  Maya Tutughamiarso; Michael Bolte; Ernst Egert
Journal:  Acta Crystallogr C       Date:  2009-10-10       Impact factor: 1.172

  3 in total

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