| Literature DB >> 21578424 |
Cuong Quoc Ton, Michael Bolte.
Abstract
The title compound, C(6)H(5)NO(2)·C(6)H(6)O(2), crystallizes with one pyridinium-2-carboxyl-ate zwitterion and one mol-ecule of benzene-1,2-diol in the asymmetric unit. The crystal structure is characterized by alternating mol-ecules forming zigzag chains running along the a axis: the mol-ecules are connected by O-H⋯O and N-H⋯(O,O) hydrogen bonds.Entities:
Year: 2009 PMID: 21578424 PMCID: PMC2971006 DOI: 10.1107/S1600536809043207
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H5NO2·C6H6O2 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 6345 reflections |
| θ = 3.5–24.3° | |
| µ = 0.11 mm−1 | |
| Block, colourless | |
| 0.21 × 0.18 × 0.16 mm |
| Stoe IPDSII two-circle diffractometer | 1105 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.8°, θmin = 3.1° |
| ω scans | |
| 11928 measured reflections | |
| 1196 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 1196 reflections | Δρmax = 0.44 e Å−3 |
| 155 parameters | Δρmin = −0.34 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.036 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.1064 (7) | 0.3802 (7) | 0.0845 (2) | 0.0257 (11) | |
| H1 | 1.2093 | 0.4153 | 0.0679 | 0.039* | |
| O2 | 0.8174 (6) | 0.1866 (8) | 0.1466 (2) | 0.0295 (12) | |
| H2 | 0.7994 | 0.2756 | 0.1214 | 0.044* | |
| C1 | 1.1455 (9) | 0.3029 (9) | 0.1410 (3) | 0.0200 (13) | |
| C2 | 0.9985 (9) | 0.2048 (10) | 0.1716 (3) | 0.0220 (13) | |
| C3 | 1.0330 (10) | 0.1145 (11) | 0.2274 (3) | 0.0259 (14) | |
| H3 | 0.9332 | 0.0460 | 0.2473 | 0.031* | |
| C4 | 1.2160 (10) | 0.1249 (11) | 0.2542 (3) | 0.0303 (16) | |
| H4 | 1.2399 | 0.0649 | 0.2925 | 0.036* | |
| C5 | 1.3612 (9) | 0.2231 (10) | 0.2244 (3) | 0.0280 (15) | |
| H5 | 1.4850 | 0.2302 | 0.2424 | 0.034* | |
| C6 | 1.3273 (9) | 0.3110 (10) | 0.1686 (3) | 0.0254 (14) | |
| H6 | 1.4284 | 0.3777 | 0.1487 | 0.031* | |
| O11 | 0.3875 (7) | 0.5038 (7) | 0.0125 (2) | 0.0307 (12) | |
| O12 | 0.6497 (8) | 0.4131 (10) | 0.0643 (3) | 0.0516 (18) | |
| N1 | 0.8827 (8) | 0.5092 (8) | −0.0246 (2) | 0.0222 (12) | |
| H31 | 0.9086 | 0.4912 | 0.0160 | 0.027* | |
| C11 | 1.0169 (10) | 0.5516 (10) | −0.0666 (3) | 0.0260 (15) | |
| H11 | 1.1479 | 0.5226 | −0.0591 | 0.031* | |
| C13 | 0.6922 (9) | 0.5494 (9) | −0.0326 (3) | 0.0208 (13) | |
| C14 | 0.6360 (10) | 0.6404 (9) | −0.0853 (3) | 0.0237 (14) | |
| H14 | 0.5049 | 0.6725 | −0.0914 | 0.028* | |
| C15 | 0.7722 (10) | 0.6856 (10) | −0.1299 (3) | 0.0275 (15) | |
| H15 | 0.7347 | 0.7491 | −0.1665 | 0.033* | |
| C16 | 0.9629 (10) | 0.6368 (11) | −0.1202 (3) | 0.0301 (17) | |
| H16 | 1.0559 | 0.6628 | −0.1510 | 0.036* | |
| C131 | 0.5649 (10) | 0.4815 (11) | 0.0200 (3) | 0.0283 (15) |
| O1 | 0.015 (2) | 0.032 (2) | 0.030 (2) | −0.002 (2) | 0.0002 (18) | 0.006 (2) |
| O2 | 0.015 (2) | 0.033 (3) | 0.041 (3) | −0.005 (2) | −0.003 (2) | 0.007 (2) |
| C1 | 0.017 (3) | 0.015 (3) | 0.028 (3) | −0.007 (3) | 0.002 (3) | −0.001 (3) |
| C2 | 0.017 (3) | 0.020 (3) | 0.029 (3) | −0.004 (3) | 0.000 (3) | −0.003 (3) |
| C3 | 0.025 (3) | 0.026 (3) | 0.027 (3) | −0.002 (3) | 0.006 (3) | −0.002 (3) |
| C4 | 0.032 (4) | 0.034 (4) | 0.026 (3) | 0.001 (3) | −0.004 (3) | 0.006 (3) |
| C5 | 0.019 (3) | 0.035 (4) | 0.030 (3) | 0.000 (3) | −0.004 (3) | −0.003 (3) |
| C6 | 0.019 (3) | 0.029 (3) | 0.028 (3) | −0.005 (3) | 0.003 (3) | −0.003 (3) |
| O11 | 0.016 (2) | 0.043 (3) | 0.033 (2) | −0.002 (2) | 0.002 (2) | 0.002 (3) |
| O12 | 0.024 (3) | 0.086 (5) | 0.044 (3) | 0.015 (3) | 0.007 (2) | 0.033 (3) |
| N1 | 0.019 (3) | 0.025 (3) | 0.023 (2) | 0.004 (3) | 0.001 (2) | 0.000 (2) |
| C11 | 0.022 (3) | 0.022 (3) | 0.034 (3) | 0.000 (3) | 0.005 (3) | −0.002 (3) |
| C13 | 0.015 (3) | 0.015 (3) | 0.033 (3) | −0.001 (2) | 0.002 (3) | 0.000 (3) |
| C14 | 0.019 (3) | 0.025 (3) | 0.027 (3) | 0.000 (3) | −0.002 (3) | 0.002 (3) |
| C15 | 0.038 (4) | 0.021 (3) | 0.024 (3) | −0.001 (3) | −0.002 (3) | −0.002 (3) |
| C16 | 0.028 (4) | 0.034 (4) | 0.028 (3) | −0.001 (3) | 0.004 (3) | 0.002 (3) |
| C131 | 0.028 (4) | 0.028 (3) | 0.029 (3) | 0.004 (3) | 0.003 (3) | 0.005 (3) |
| O1—C1 | 1.374 (8) | O11—C131 | 1.257 (8) |
| O1—H1 | 0.8397 | O12—C131 | 1.229 (9) |
| O2—C2 | 1.381 (7) | N1—C11 | 1.342 (9) |
| O2—H2 | 0.8392 | N1—C13 | 1.368 (8) |
| C1—C2 | 1.401 (9) | N1—H31 | 0.9123 |
| C1—C6 | 1.404 (9) | C11—C16 | 1.365 (10) |
| C2—C3 | 1.391 (9) | C11—H11 | 0.9500 |
| C3—C4 | 1.405 (9) | C13—C14 | 1.370 (9) |
| C3—H3 | 0.9500 | C13—C131 | 1.526 (9) |
| C4—C5 | 1.384 (10) | C14—C15 | 1.396 (10) |
| C4—H4 | 0.9500 | C14—H14 | 0.9500 |
| C5—C6 | 1.383 (9) | C15—C16 | 1.389 (10) |
| C5—H5 | 0.9500 | C15—H15 | 0.9500 |
| C6—H6 | 0.9500 | C16—H16 | 0.9500 |
| C1—O1—H1 | 109.4 | C11—N1—H31 | 123.7 |
| C2—O2—H2 | 109.1 | C13—N1—H31 | 110.1 |
| O1—C1—C2 | 118.3 (5) | N1—C11—C16 | 119.3 (7) |
| O1—C1—C6 | 123.2 (5) | N1—C11—H11 | 120.4 |
| C2—C1—C6 | 118.5 (6) | C16—C11—H11 | 120.4 |
| O2—C2—C3 | 117.5 (6) | N1—C13—C14 | 118.6 (6) |
| O2—C2—C1 | 121.7 (6) | N1—C13—C131 | 113.9 (6) |
| C3—C2—C1 | 120.7 (6) | C14—C13—C131 | 127.4 (6) |
| C2—C3—C4 | 119.8 (6) | C13—C14—C15 | 119.7 (6) |
| C2—C3—H3 | 120.1 | C13—C14—H14 | 120.2 |
| C4—C3—H3 | 120.1 | C15—C14—H14 | 120.2 |
| C5—C4—C3 | 119.6 (6) | C16—C15—C14 | 119.4 (6) |
| C5—C4—H4 | 120.2 | C16—C15—H15 | 120.3 |
| C3—C4—H4 | 120.2 | C14—C15—H15 | 120.3 |
| C6—C5—C4 | 120.5 (6) | C11—C16—C15 | 120.0 (7) |
| C6—C5—H5 | 119.8 | C11—C16—H16 | 120.0 |
| C4—C5—H5 | 119.8 | C15—C16—H16 | 120.0 |
| C5—C6—C1 | 120.9 (6) | O12—C131—O11 | 128.6 (7) |
| C5—C6—H6 | 119.6 | O12—C131—C13 | 115.6 (6) |
| C1—C6—H6 | 119.6 | O11—C131—C13 | 115.8 (6) |
| C11—N1—C13 | 123.0 (6) | ||
| O1—C1—C2—O2 | −0.7 (10) | C11—N1—C13—C14 | −1.3 (10) |
| C6—C1—C2—O2 | −178.3 (6) | C11—N1—C13—C131 | 177.8 (6) |
| O1—C1—C2—C3 | 176.4 (6) | N1—C13—C14—C15 | 1.5 (9) |
| C6—C1—C2—C3 | −1.2 (10) | C131—C13—C14—C15 | −177.4 (6) |
| O2—C2—C3—C4 | 178.6 (6) | C13—C14—C15—C16 | 0.2 (10) |
| C1—C2—C3—C4 | 1.4 (10) | N1—C11—C16—C15 | 2.5 (11) |
| C2—C3—C4—C5 | −0.8 (11) | C14—C15—C16—C11 | −2.3 (11) |
| C3—C4—C5—C6 | 0.1 (11) | N1—C13—C131—O12 | 5.1 (9) |
| C4—C5—C6—C1 | 0.1 (11) | C14—C13—C131—O12 | −176.0 (7) |
| O1—C1—C6—C5 | −177.0 (6) | N1—C13—C131—O11 | −175.2 (6) |
| C2—C1—C6—C5 | 0.5 (10) | C14—C13—C131—O11 | 3.7 (10) |
| C13—N1—C11—C16 | −0.8 (10) |
| H··· | ||||
| O1—H1···O11i | 0.84 | 1.84 | 2.655 (6) | 163 |
| O2—H2···O12 | 0.84 | 1.89 | 2.662 (7) | 153 |
| N1—H31···O12 | 0.91 | 2.16 | 2.617 (7) | 110 |
| N1—H31···O1 | 0.91 | 2.18 | 2.984 (7) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O11i | 0.84 | 1.84 | 2.655 (6) | 163 |
| O2—H2⋯O12 | 0.84 | 1.89 | 2.662 (7) | 153 |
| N1—H31⋯O12 | 0.91 | 2.16 | 2.617 (7) | 110 |
| N1—H31⋯O1 | 0.91 | 2.18 | 2.984 (7) | 147 |
Symmetry code: (i) .