| Literature DB >> 21578411 |
Mihaela Cibian1, Janaina G Ferreira, Garry S Hanan.
Abstract
The title compound, C(13)H(11)BrN(2)O, a hydroxy-amidine derivative (an amidoxime), was obtained by addition of the corresponding imidoyl chloride to hydroxy-lamine. The benzene and phenyl rings are twisted from the mean plane of the hydroxy-amidine group by 34.4 (1) and 59.2 (1)°, respectively. In the crystal structure, inter-molecular O-H⋯N hydrogen bonds link pairs of mol-ecules, forming centrosymmetric dimers.Entities:
Year: 2009 PMID: 21578411 PMCID: PMC2971251 DOI: 10.1107/S1600536809040057
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11BrN2O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2yn | Cell parameters from 11676 reflections |
| θ = 2.9–71.9° | |
| µ = 4.53 mm−1 | |
| β = 103.415 (1)° | Block, yellow |
| 0.18 × 0.15 × 0.09 mm | |
| Bruker APEXII diffractometer | 2356 independent reflections |
| Radiation source: Rotating Anode | 2273 reflections with |
| Montel 200 optics | |
| Detector resolution: 5.5 pixels mm-1 | θmax = 72.5°, θmin = 4.5° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15615 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2356 reflections | Δρmax = 0.39 e Å−3 |
| 155 parameters | Δρmin = −0.68 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0212 (8) |
| Experimental. X-ray crystallographic data for (I) were collected from a single-crystal
sample, which was mounted on a loop fiber. Data were collected using a Bruker
Platform diffractometer, equipped with a Bruker |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br | 1.22913 (4) | 0.643427 (14) | 0.618702 (18) | 0.04819 (16) | |
| O1 | 0.4208 (2) | 0.40817 (9) | 0.94989 (11) | 0.0393 (3) | |
| H1 | 0.3752 | 0.4375 | 0.9949 | 0.059* | |
| N1 | 0.5789 (3) | 0.45874 (10) | 0.91086 (12) | 0.0340 (3) | |
| N2 | 0.4624 (3) | 0.36287 (11) | 0.77216 (14) | 0.0410 (4) | |
| H2 | 0.3431 | 0.3517 | 0.7958 | 0.049* | |
| C1 | 0.5957 (3) | 0.42884 (11) | 0.82101 (14) | 0.0313 (4) | |
| C2 | 0.7549 (3) | 0.47517 (11) | 0.77017 (13) | 0.0299 (4) | |
| C3 | 0.9510 (3) | 0.50983 (12) | 0.83173 (14) | 0.0346 (4) | |
| H3 | 0.9873 | 0.4994 | 0.9051 | 0.041* | |
| C4 | 1.0932 (3) | 0.55912 (13) | 0.78747 (15) | 0.0368 (4) | |
| H4 | 1.2261 | 0.5828 | 0.8299 | 0.044* | |
| C5 | 1.0391 (3) | 0.57343 (12) | 0.68075 (15) | 0.0353 (4) | |
| C6 | 0.8484 (4) | 0.53857 (14) | 0.61731 (15) | 0.0408 (4) | |
| H6 | 0.8153 | 0.5479 | 0.5438 | 0.049* | |
| C7 | 0.7060 (3) | 0.48970 (13) | 0.66248 (15) | 0.0381 (4) | |
| H7 | 0.5738 | 0.4659 | 0.6196 | 0.046* | |
| C8 | 0.4934 (3) | 0.31015 (12) | 0.68770 (14) | 0.0337 (4) | |
| C9 | 0.3113 (3) | 0.29434 (13) | 0.60544 (16) | 0.0386 (4) | |
| H9 | 0.1703 | 0.3189 | 0.6062 | 0.046* | |
| C10 | 0.3362 (4) | 0.24228 (13) | 0.52181 (16) | 0.0417 (4) | |
| H10 | 0.2117 | 0.2309 | 0.4656 | 0.050* | |
| C11 | 0.5407 (4) | 0.20724 (13) | 0.52029 (16) | 0.0414 (4) | |
| H11 | 0.5577 | 0.1726 | 0.4626 | 0.050* | |
| C12 | 0.7220 (3) | 0.22247 (14) | 0.60292 (17) | 0.0418 (5) | |
| H12 | 0.8629 | 0.1980 | 0.6017 | 0.050* | |
| C13 | 0.6989 (3) | 0.27319 (13) | 0.68740 (15) | 0.0384 (4) | |
| H13 | 0.8226 | 0.2826 | 0.7446 | 0.046* |
| Br | 0.0483 (2) | 0.0459 (2) | 0.0568 (2) | −0.00414 (8) | 0.02515 (13) | 0.00910 (8) |
| O1 | 0.0486 (8) | 0.0365 (7) | 0.0400 (7) | −0.0037 (6) | 0.0248 (6) | −0.0008 (5) |
| N1 | 0.0401 (8) | 0.0326 (8) | 0.0336 (7) | 0.0003 (6) | 0.0173 (6) | 0.0020 (6) |
| N2 | 0.0419 (9) | 0.0438 (9) | 0.0439 (10) | −0.0102 (7) | 0.0235 (8) | −0.0114 (7) |
| C1 | 0.0353 (8) | 0.0289 (8) | 0.0315 (8) | 0.0025 (7) | 0.0113 (7) | −0.0001 (6) |
| C2 | 0.0346 (8) | 0.0272 (8) | 0.0300 (8) | 0.0029 (6) | 0.0118 (7) | 0.0004 (6) |
| C3 | 0.0399 (9) | 0.0362 (9) | 0.0280 (8) | 0.0020 (7) | 0.0088 (7) | 0.0005 (7) |
| C4 | 0.0353 (9) | 0.0370 (9) | 0.0380 (9) | −0.0008 (7) | 0.0086 (7) | −0.0007 (7) |
| C5 | 0.0383 (9) | 0.0304 (8) | 0.0409 (10) | 0.0017 (7) | 0.0170 (7) | 0.0038 (7) |
| C6 | 0.0492 (11) | 0.0437 (10) | 0.0298 (9) | −0.0029 (9) | 0.0101 (8) | 0.0063 (8) |
| C7 | 0.0422 (10) | 0.0403 (10) | 0.0306 (9) | −0.0052 (8) | 0.0061 (7) | 0.0018 (7) |
| C8 | 0.0394 (9) | 0.0307 (8) | 0.0344 (9) | −0.0060 (7) | 0.0156 (7) | −0.0028 (7) |
| C9 | 0.0377 (9) | 0.0352 (9) | 0.0439 (10) | −0.0029 (7) | 0.0113 (8) | −0.0017 (8) |
| C10 | 0.0479 (11) | 0.0383 (10) | 0.0373 (10) | −0.0075 (8) | 0.0065 (8) | −0.0035 (8) |
| C11 | 0.0565 (12) | 0.0332 (9) | 0.0389 (10) | −0.0079 (8) | 0.0199 (9) | −0.0072 (7) |
| C12 | 0.0410 (10) | 0.0356 (10) | 0.0534 (11) | −0.0016 (7) | 0.0203 (9) | −0.0058 (8) |
| C13 | 0.0374 (9) | 0.0372 (9) | 0.0409 (10) | −0.0031 (7) | 0.0099 (8) | −0.0046 (8) |
| Br—C5 | 1.9040 (18) | C6—C7 | 1.387 (3) |
| O1—N1 | 1.430 (2) | C6—H6 | 0.9500 |
| O1—H1 | 0.8400 | C7—H7 | 0.9500 |
| N1—C1 | 1.292 (2) | C8—C9 | 1.388 (3) |
| N2—C1 | 1.363 (2) | C8—C13 | 1.390 (3) |
| N2—C8 | 1.419 (2) | C9—C10 | 1.393 (3) |
| N2—H2 | 0.8800 | C9—H9 | 0.9500 |
| C1—C2 | 1.489 (2) | C10—C11 | 1.376 (3) |
| C2—C7 | 1.394 (2) | C10—H10 | 0.9500 |
| C2—C3 | 1.394 (3) | C11—C12 | 1.386 (3) |
| C3—C4 | 1.383 (3) | C11—H11 | 0.9500 |
| C3—H3 | 0.9500 | C12—C13 | 1.387 (3) |
| C4—C5 | 1.381 (3) | C12—H12 | 0.9500 |
| C4—H4 | 0.9500 | C13—H13 | 0.9500 |
| C5—C6 | 1.382 (3) | ||
| N1—O1—H1 | 109.5 | C7—C6—H6 | 120.5 |
| C1—N1—O1 | 110.06 (15) | C6—C7—C2 | 120.66 (17) |
| C1—N2—C8 | 127.65 (17) | C6—C7—H7 | 119.7 |
| C1—N2—H2 | 116.2 | C2—C7—H7 | 119.7 |
| C8—N2—H2 | 116.2 | C9—C8—C13 | 120.19 (17) |
| N1—C1—N2 | 121.56 (17) | C9—C8—N2 | 118.38 (18) |
| N1—C1—C2 | 116.31 (16) | C13—C8—N2 | 121.42 (17) |
| N2—C1—C2 | 121.95 (16) | C8—C9—C10 | 119.66 (19) |
| C7—C2—C3 | 118.85 (16) | C8—C9—H9 | 120.2 |
| C7—C2—C1 | 121.35 (16) | C10—C9—H9 | 120.2 |
| C3—C2—C1 | 119.67 (15) | C11—C10—C9 | 120.21 (19) |
| C4—C3—C2 | 120.89 (17) | C11—C10—H10 | 119.9 |
| C4—C3—H3 | 119.6 | C9—C10—H10 | 119.9 |
| C2—C3—H3 | 119.6 | C10—C11—C12 | 120.06 (18) |
| C5—C4—C3 | 119.02 (17) | C10—C11—H11 | 120.0 |
| C5—C4—H4 | 120.5 | C12—C11—H11 | 120.0 |
| C3—C4—H4 | 120.5 | C11—C12—C13 | 120.36 (19) |
| C4—C5—C6 | 121.51 (17) | C11—C12—H12 | 119.8 |
| C4—C5—Br | 119.69 (15) | C13—C12—H12 | 119.8 |
| C6—C5—Br | 118.80 (14) | C12—C13—C8 | 119.50 (18) |
| C5—C6—C7 | 119.05 (17) | C12—C13—H13 | 120.3 |
| C5—C6—H6 | 120.5 | C8—C13—H13 | 120.3 |
| O1—N1—C1—N2 | 4.8 (2) | Br—C5—C6—C7 | −178.10 (16) |
| O1—N1—C1—C2 | 179.94 (14) | C5—C6—C7—C2 | −0.5 (3) |
| C8—N2—C1—N1 | −164.13 (19) | C3—C2—C7—C6 | −0.7 (3) |
| C8—N2—C1—C2 | 21.0 (3) | C1—C2—C7—C6 | 175.18 (18) |
| N1—C1—C2—C7 | −141.09 (18) | C1—N2—C8—C9 | −135.4 (2) |
| N2—C1—C2—C7 | 34.0 (3) | C1—N2—C8—C13 | 46.0 (3) |
| N1—C1—C2—C3 | 34.7 (2) | C13—C8—C9—C10 | −0.9 (3) |
| N2—C1—C2—C3 | −150.13 (18) | N2—C8—C9—C10 | −179.53 (17) |
| C7—C2—C3—C4 | 1.1 (3) | C8—C9—C10—C11 | −0.5 (3) |
| C1—C2—C3—C4 | −174.82 (16) | C9—C10—C11—C12 | 1.1 (3) |
| C2—C3—C4—C5 | −0.3 (3) | C10—C11—C12—C13 | −0.2 (3) |
| C3—C4—C5—C6 | −1.0 (3) | C11—C12—C13—C8 | −1.3 (3) |
| C3—C4—C5—Br | 178.52 (14) | C9—C8—C13—C12 | 1.8 (3) |
| C4—C5—C6—C7 | 1.4 (3) | N2—C8—C13—C12 | −179.64 (18) |
| H··· | ||||
| O1—H1···N1i | 0.84 | 1.99 | 2.733 (2) | 147 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1i | 0.84 | 1.99 | 2.733 (2) | 147 |
Symmetry code: (i) .