Literature DB >> 21578388

tert-Butyl 3-[2,2-bis-(ethoxy-carbon-yl)vin-yl]-2-bromo-methyl-1H-indole-1-carboxyl-ate.

M Thenmozhi, T Kavitha, V Dhayalan, A K Mohanakrishnan, M N Ponnuswamy.   

Abstract

In the title compound, C(22)H(26)BrNO(6), the indole ring system is planar [maximum deviation 0.029 (2) Å]. The tert-butyl bound carboxyl-ate group forms a dihedral angle of 17.54 (8)° with the indole ring system. In the crystal, mol-ecules are linked into centrosymmetric R(2) (2)(10) dimers by paired C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578388      PMCID: PMC2971097          DOI: 10.1107/S1600536809041567

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to indoles, see: Gribble (1996 ▶); Jing-Ru et al. (2007 ▶); Ximenes et al. (2005 ▶). For hybridization, see: Beddoes et al. (1986 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C22H26BrNO6 M = 480.35 Triclinic, a = 10.8682 (3) Å b = 11.1094 (4) Å c = 11.5699 (6) Å α = 111.984 (3)° β = 105.841 (2)° γ = 106.926 (2)° V = 1118.51 (9) Å3 Z = 2 Mo Kα radiation μ = 1.88 mm−1 T = 293 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker Kappa APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS, Sheldrick, 2001 ▶) T min = 0.603, T max = 0.706 32165 measured reflections 8669 independent reflections 5490 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.114 S = 1.01 8669 reflections 271 parameters 1 restraint H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.60 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809041567/ci2911sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809041567/ci2911Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H26BrNO6Z = 2
Mr = 480.35F(000) = 496
Triclinic, P1Dx = 1.426 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.8682 (3) ÅCell parameters from 8669 reflections
b = 11.1094 (4) Åθ = 2.1–33.8°
c = 11.5699 (6) ŵ = 1.88 mm1
α = 111.984 (3)°T = 293 K
β = 105.841 (2)°Block, colourless
γ = 106.926 (2)°0.30 × 0.25 × 0.20 mm
V = 1118.51 (9) Å3
Bruker Kappa APEXII area-detector diffractometer8669 independent reflections
Radiation source: fine-focus sealed tube5490 reflections with I > 2σ(I)
graphiteRint = 0.028
ω and φ scansθmax = 33.8°, θmin = 2.1°
Absorption correction: multi-scan (SADABS, Sheldrick, 2001)h = −17→16
Tmin = 0.603, Tmax = 0.706k = −16→17
32165 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0566P)2 + 0.1525P] where P = (Fo2 + 2Fc2)/3
8669 reflections(Δ/σ)max = 0.001
271 parametersΔρmax = 0.29 e Å3
1 restraintΔρmin = −0.60 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.09184 (16)0.74325 (17)1.16827 (16)0.0342 (3)
C30.07086 (19)0.8044 (2)1.28578 (19)0.0441 (4)
H30.13580.83071.37250.053*
C4−0.0521 (2)0.8242 (2)1.2671 (2)0.0537 (5)
H4−0.06940.86591.34350.064*
C5−0.14938 (19)0.7836 (2)1.1379 (2)0.0528 (5)
H5−0.22990.79971.12930.063*
C6−0.12946 (17)0.7201 (2)1.0217 (2)0.0427 (4)
H6−0.19660.69090.93490.051*
C7−0.00584 (15)0.70013 (16)1.03705 (17)0.0341 (3)
C80.04611 (15)0.63561 (16)0.94006 (16)0.0328 (3)
C90.17083 (15)0.63964 (16)1.01285 (15)0.0323 (3)
C100.31912 (16)0.73467 (18)1.26701 (16)0.0365 (3)
C110.51726 (16)0.67167 (19)1.32235 (17)0.0391 (3)
C120.5566 (2)0.5718 (3)1.2261 (2)0.0578 (5)
H12A0.48290.47471.17910.087*
H12B0.64480.57601.27820.087*
H12C0.56710.60101.15980.087*
C130.4815 (2)0.6177 (3)1.4162 (2)0.0565 (5)
H13A0.44950.67841.47160.085*
H13B0.56470.61991.47520.085*
H13C0.40740.52021.36160.085*
C140.6292 (2)0.8251 (2)1.3980 (2)0.0603 (5)
H14A0.64020.85601.33280.090*
H14B0.71800.83161.45170.090*
H14C0.60090.88611.45820.090*
C15−0.02203 (15)0.56833 (17)0.78999 (16)0.0361 (3)
H15−0.02460.47880.74070.043*
C16−0.08096 (15)0.62017 (18)0.71535 (16)0.0367 (3)
C17−0.06921 (18)0.76980 (19)0.77787 (18)0.0425 (4)
C18−0.1952 (2)0.9111 (2)0.8069 (3)0.0658 (6)
H18A−0.11470.97700.89660.079*
H18B−0.18640.95050.74600.079*
C19−0.3273 (3)0.8959 (3)0.8200 (4)0.1028 (11)
H19A−0.40620.81720.73550.154*
H19B−0.33670.98370.83870.154*
H19C−0.32620.87660.89440.154*
C20−0.14814 (17)0.5379 (2)0.56162 (18)0.0428 (4)
C21−0.2390 (2)0.3118 (2)0.36364 (19)0.0571 (5)
H21A−0.17870.34800.32450.069*
H21B−0.32990.31220.32470.069*
C22−0.2597 (4)0.1643 (3)0.3329 (3)0.0913 (9)
H22A−0.16880.16470.36880.137*
H22B−0.30730.10090.23470.137*
H22C−0.31650.13110.37500.137*
C230.26606 (17)0.59735 (18)0.95525 (16)0.0373 (3)
H23A0.21400.53620.85580.045*
H23B0.29970.54230.99290.045*
N10.20188 (13)0.70606 (14)1.15357 (13)0.0331 (3)
O10.38397 (12)0.65566 (13)1.22367 (11)0.0397 (2)
O20.34760 (15)0.81621 (16)1.38221 (13)0.0570 (4)
O3−0.19532 (13)0.77004 (13)0.75104 (14)0.0476 (3)
O40.04207 (15)0.87474 (16)0.84512 (19)0.0707 (4)
O5−0.17187 (14)0.40133 (14)0.51266 (12)0.0483 (3)
O6−0.17445 (18)0.59307 (18)0.49278 (15)0.0668 (4)
Br10.429587 (19)0.76941 (2)0.99976 (2)0.05385 (8)
U11U22U33U12U13U23
C20.0370 (7)0.0337 (8)0.0387 (8)0.0197 (6)0.0174 (6)0.0204 (7)
C30.0481 (9)0.0488 (10)0.0408 (9)0.0256 (8)0.0221 (8)0.0219 (8)
C40.0559 (10)0.0622 (12)0.0581 (12)0.0346 (10)0.0359 (10)0.0291 (10)
C50.0445 (9)0.0635 (12)0.0712 (13)0.0335 (9)0.0335 (9)0.0392 (11)
C60.0344 (7)0.0478 (10)0.0531 (10)0.0204 (7)0.0174 (7)0.0311 (8)
C70.0342 (7)0.0320 (7)0.0414 (8)0.0164 (6)0.0152 (6)0.0224 (7)
C80.0346 (7)0.0316 (7)0.0334 (7)0.0160 (6)0.0114 (6)0.0184 (6)
C90.0361 (7)0.0323 (7)0.0299 (7)0.0182 (6)0.0112 (6)0.0163 (6)
C100.0384 (7)0.0385 (8)0.0335 (8)0.0202 (7)0.0123 (6)0.0185 (7)
C110.0334 (7)0.0500 (10)0.0342 (8)0.0223 (7)0.0086 (6)0.0221 (7)
C120.0541 (10)0.0722 (14)0.0528 (11)0.0435 (10)0.0189 (9)0.0271 (10)
C130.0495 (10)0.0813 (15)0.0576 (12)0.0335 (10)0.0208 (9)0.0497 (11)
C140.0430 (9)0.0559 (12)0.0664 (14)0.0151 (9)0.0151 (9)0.0268 (11)
C150.0340 (7)0.0369 (8)0.0340 (8)0.0155 (6)0.0096 (6)0.0181 (7)
C160.0311 (7)0.0401 (8)0.0356 (8)0.0142 (6)0.0084 (6)0.0209 (7)
C170.0402 (8)0.0410 (9)0.0419 (9)0.0148 (7)0.0079 (7)0.0256 (8)
C180.0744 (14)0.0448 (11)0.0804 (16)0.0348 (11)0.0287 (12)0.0297 (11)
C190.0846 (18)0.0762 (19)0.129 (3)0.0495 (16)0.0475 (19)0.0222 (18)
C200.0338 (7)0.0545 (11)0.0392 (9)0.0184 (7)0.0104 (7)0.0268 (8)
C210.0551 (10)0.0651 (13)0.0308 (9)0.0161 (10)0.0135 (8)0.0163 (9)
C220.129 (3)0.0657 (16)0.0488 (14)0.0332 (17)0.0320 (15)0.0117 (12)
C230.0413 (7)0.0407 (8)0.0314 (8)0.0238 (7)0.0135 (6)0.0164 (7)
N10.0359 (6)0.0358 (7)0.0297 (6)0.0204 (5)0.0115 (5)0.0165 (5)
O10.0410 (5)0.0488 (7)0.0298 (5)0.0282 (5)0.0088 (5)0.0179 (5)
O20.0569 (7)0.0709 (9)0.0311 (6)0.0389 (7)0.0105 (6)0.0118 (6)
O30.0427 (6)0.0366 (6)0.0566 (8)0.0189 (5)0.0121 (6)0.0220 (6)
O40.0441 (7)0.0440 (8)0.0922 (12)0.0081 (6)0.0071 (8)0.0281 (8)
O50.0547 (7)0.0486 (7)0.0314 (6)0.0190 (6)0.0119 (5)0.0178 (6)
O60.0823 (10)0.0742 (10)0.0452 (8)0.0385 (9)0.0118 (7)0.0387 (8)
Br10.05092 (11)0.05899 (14)0.05578 (13)0.02350 (9)0.02807 (10)0.02914 (10)
C2—C31.389 (2)C14—H14A0.96
C2—C71.393 (2)C14—H14B0.96
C2—N11.4057 (17)C14—H14C0.96
C3—C41.390 (2)C15—C161.331 (2)
C3—H30.93C15—H150.93
C4—C51.383 (3)C16—C201.489 (2)
C4—H40.93C16—C171.493 (2)
C5—C61.374 (3)C17—O41.189 (2)
C5—H50.93C17—O31.321 (2)
C6—C71.399 (2)C18—C191.452 (3)
C6—H60.93C18—O31.454 (2)
C7—C81.439 (2)C18—H18A0.97
C8—C91.365 (2)C18—H18B0.97
C8—C151.458 (2)C19—H19A0.96
C9—N11.4017 (19)C19—H19B0.96
C9—C231.4701 (19)C19—H19C0.96
C10—O21.183 (2)C20—O61.198 (2)
C10—O11.3199 (18)C20—O51.318 (2)
C10—N11.409 (2)C21—O51.450 (2)
C11—O11.4929 (17)C21—C221.471 (4)
C11—C141.498 (3)C21—H21A0.97
C11—C121.504 (2)C21—H21B0.97
C11—C131.507 (2)C22—H22A0.96
C12—H12A0.96C22—H22B0.96
C12—H12B0.96C22—H22C0.96
C12—H12C0.96C23—Br11.9654 (17)
C13—H13A0.96C23—H23A0.97
C13—H13B0.96C23—H23B0.97
C13—H13C0.96
C3—C2—C7122.51 (14)H14B—C14—H14C109.5
C3—C2—N1129.77 (15)C16—C15—C8127.53 (15)
C7—C2—N1107.63 (12)C16—C15—H15116.2
C2—C3—C4116.62 (17)C8—C15—H15116.2
C2—C3—H3121.7C15—C16—C20121.44 (15)
C4—C3—H3121.7C15—C16—C17122.82 (15)
C5—C4—C3121.64 (17)C20—C16—C17115.34 (14)
C5—C4—H4119.2O4—C17—O3125.11 (17)
C3—C4—H4119.2O4—C17—C16122.78 (16)
C6—C5—C4121.34 (15)O3—C17—C16112.10 (14)
C6—C5—H5119.3C19—C18—O3109.1 (2)
C4—C5—H5119.3C19—C18—H18A109.9
C5—C6—C7118.48 (17)O3—C18—H18A109.9
C5—C6—H6120.8C19—C18—H18B109.9
C7—C6—H6120.8O3—C18—H18B109.9
C2—C7—C6119.38 (14)H18A—C18—H18B108.3
C2—C7—C8107.57 (12)C18—C19—H19A109.5
C6—C7—C8133.01 (15)C18—C19—H19B109.5
C9—C8—C7107.60 (13)H19A—C19—H19B109.5
C9—C8—C15124.17 (13)C18—C19—H19C109.5
C7—C8—C15128.12 (13)H19A—C19—H19C109.5
C8—C9—N1109.10 (12)H19B—C19—H19C109.5
C8—C9—C23125.35 (14)O6—C20—O5125.09 (17)
N1—C9—C23125.16 (13)O6—C20—C16122.46 (18)
O2—C10—O1127.84 (15)O5—C20—C16112.44 (14)
O2—C10—N1122.20 (14)O5—C21—C22107.12 (18)
O1—C10—N1109.93 (13)O5—C21—H21A110.3
O1—C11—C14110.16 (14)C22—C21—H21A110.3
O1—C11—C12101.60 (13)O5—C21—H21B110.3
C14—C11—C12111.45 (16)C22—C21—H21B110.3
O1—C11—C13108.63 (13)H21A—C21—H21B108.5
C14—C11—C13113.56 (17)C21—C22—H22A109.5
C12—C11—C13110.76 (17)C21—C22—H22B109.5
C11—C12—H12A109.5H22A—C22—H22B109.5
C11—C12—H12B109.5C21—C22—H22C109.5
H12A—C12—H12B109.5H22A—C22—H22C109.5
C11—C12—H12C109.5H22B—C22—H22C109.5
H12A—C12—H12C109.5C9—C23—Br1110.47 (11)
H12B—C12—H12C109.5C9—C23—H23A109.6
C11—C13—H13A109.5Br1—C23—H23A109.6
C11—C13—H13B109.5C9—C23—H23B109.6
H13A—C13—H13B109.5Br1—C23—H23B109.6
C11—C13—H13C109.5H23A—C23—H23B108.1
H13A—C13—H13C109.5C9—N1—C2108.08 (12)
H13B—C13—H13C109.5C9—N1—C10129.37 (12)
C11—C14—H14A109.5C2—N1—C10122.55 (13)
C11—C14—H14B109.5C10—O1—C11120.94 (12)
H14A—C14—H14B109.5C17—O3—C18116.27 (15)
C11—C14—H14C109.5C20—O5—C21116.52 (15)
H14A—C14—H14C109.5
C7—C2—C3—C4−1.5 (3)C17—C16—C20—O69.1 (2)
N1—C2—C3—C4−177.75 (17)C15—C16—C20—O515.1 (2)
C2—C3—C4—C50.7 (3)C17—C16—C20—O5−171.97 (14)
C3—C4—C5—C60.8 (3)C8—C9—C23—Br1101.19 (16)
C4—C5—C6—C7−1.6 (3)N1—C9—C23—Br1−70.93 (17)
C3—C2—C7—C60.8 (2)C8—C9—N1—C20.55 (17)
N1—C2—C7—C6177.74 (14)C23—C9—N1—C2173.76 (14)
C3—C2—C7—C8−177.20 (15)C8—C9—N1—C10−179.59 (15)
N1—C2—C7—C8−0.23 (17)C23—C9—N1—C10−6.4 (3)
C5—C6—C7—C20.8 (2)C3—C2—N1—C9176.49 (17)
C5—C6—C7—C8178.15 (17)C7—C2—N1—C9−0.18 (17)
C2—C7—C8—C90.57 (17)C3—C2—N1—C10−3.4 (3)
C6—C7—C8—C9−177.01 (17)C7—C2—N1—C10179.95 (14)
C2—C7—C8—C15176.90 (15)O2—C10—N1—C9164.58 (17)
C6—C7—C8—C15−0.7 (3)O1—C10—N1—C9−17.1 (2)
C7—C8—C9—N1−0.68 (17)O2—C10—N1—C2−15.6 (3)
C15—C8—C9—N1−177.20 (14)O1—C10—N1—C2162.71 (14)
C7—C8—C9—C23−173.88 (15)O2—C10—O1—C11−5.6 (3)
C15—C8—C9—C239.6 (2)N1—C10—O1—C11176.24 (13)
C9—C8—C15—C16−136.69 (17)C14—C11—O1—C10−57.2 (2)
C7—C8—C15—C1647.5 (3)C12—C11—O1—C10−175.45 (16)
C8—C15—C16—C20−179.46 (14)C13—C11—O1—C1067.7 (2)
C8—C15—C16—C178.1 (3)O4—C17—O3—C181.3 (3)
C15—C16—C17—O457.9 (3)C16—C17—O3—C18−179.61 (16)
C20—C16—C17—O4−115.0 (2)C19—C18—O3—C17−156.5 (2)
C15—C16—C17—O3−121.20 (17)O6—C20—O5—C21−1.9 (3)
C20—C16—C17—O365.95 (19)C16—C20—O5—C21179.18 (14)
C15—C16—C20—O6−163.84 (17)C22—C21—O5—C20−177.9 (2)
D—H···AD—HH···AD···AD—H···A
C18—H18A···O4i0.972.563.392 (3)144
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C18—H18A⋯O4i0.972.563.392 (3)144

Symmetry code: (i) .

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