Literature DB >> 21578300

3-(6-Methyl-2-pyrid-yl)-2-phenyl-3,4-dihydro-1,3,2-benzoxaza-phosphinine 2-oxide.

V H H Surendra Babu, M Krishnaiah, M Anil Kumar, C Suresh Reddy, Rajni Kant.   

Abstract

In the title compound, C(19)H(17)N(2)O(2)P, the six-membered 1,3,2-oxaza-phosphinine ring adopts a boat conformation with the phosphoryl O atom in an equatorial position. The dihedral angle between the 6-methyl-2-pyridyl and phenyl groups is 75.5 (1)°. These substituents are trans to each other, and are oriented at angles of 57.2 (1) and 74.8 (1)°, respectively, to the benzene ring. The crystal structure is stabilized by intra- and inter-molecular hydrogen bonds. The phosphoryl O atom participates in inter-molecular C-H⋯O inter-actions with the neighbouring mol-ecules, forming centrosymmetric R(2) (2)(14) dimers.

Entities:  

Year:  2009        PMID: 21578300      PMCID: PMC2971085          DOI: 10.1107/S1600536809040367

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of organophospho­rus compounds, see: Hoagland (1988 ▶); Smith (1983 ▶); Molodykh et al. (1990 ▶). For P—O and P=O bond lengths in related structures, see: Brzozowski et al. (1990 ▶); Angelov et al. (2002 ▶); Kant et al. (2009 ▶). For P—N bond lengths in related structures, see: Radha Krishna et al. (2007 ▶); Yang et al. (1988 ▶); Subramanian et al. (1989 ▶); Selladurai & Subramanian (1990 ▶); Selladurai et al. (1991 ▶).

Experimental

Crystal data

C19H17N2O2P M = 336.32 Triclinic, a = 7.2238 (8) Å b = 8.6573 (8) Å c = 13.7265 (14) Å α = 95.216 (8)° β = 94.397 (9)° γ = 94.330 (9)° V = 849.42 (15) Å3 Z = 2 Mo Kα radiation μ = 0.18 mm−1 T = 293 K 0.28 × 0.18 × 0.08 mm

Data collection

Oxford Diffraction Xcalibur diffractometer Absorption correction: none 12457 measured reflections 5006 independent reflections 3069 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.173 S = 1.14 5006 reflections 217 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrysAlis Pro (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis Pro (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED (Oxford Diffraction, 2007 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ZORTEP (Zsolnai, 1997 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶) and PARST95 (Nardelli, 1995 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809040367/bh2245sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809040367/bh2245Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H17N2O2PZ = 2
Mr = 336.32F(000) = 352
Triclinic, P1Dx = 1.315 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.2238 (8) ÅCell parameters from 5006 reflections
b = 8.6573 (8) Åθ = 3.3–30.1°
c = 13.7265 (14) ŵ = 0.18 mm1
α = 95.216 (8)°T = 293 K
β = 94.397 (9)°Plate, colourless
γ = 94.330 (9)°0.28 × 0.18 × 0.08 mm
V = 849.42 (15) Å3
Oxford Diffraction Xcalibur diffractometer3069 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
graphiteθmax = 30.1°, θmin = 3.3°
ω–2θ scansh = −10→10
12457 measured reflectionsk = −12→12
5006 independent reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.173H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0909P)2] where P = (Fo2 + 2Fc2)/3
5006 reflections(Δ/σ)max < 0.001
217 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.33 e Å3
0 constraints
Refinement. Weighted least-squares planes through the starred atoms (Nardelli, Musatti, Domiano & Andreetti Ric.Sci.(1965),15(II—A),807). Equation of the plane: m1*X+m2*Y+m3*Z=dPlane 1 m1 = 0.38775(0.00078) m2 = 0.69013(0.00101) m3 = -0.61104(0.00092) D = -0.04785(0.00813) Atom d s d/s (d/s)**2 C6 * 0.0033 0.0020 1.652 2.729 C7 * -0.0061 0.0019 - 3.190 10.179 C12 * 0.0060 0.0019 3.207 10.286 O4 * -0.0017 0.0014 - 1.201 1.443 P1 0.9362 0.0005 1909.984 3648038.000 N2 0.9357 0.0015 617.499 381304.969 ============ Sum((d/s)**2) for starred atoms 24.637 Chi-squared at 95% for 1 degrees of freedom: 3.84 The group of atoms deviates significantly from planarityPlane 2 m1 = 0.36501(0.00090) m2 = 0.72088(0.00066) m3 = -0.58915(0.00074) D = 0.19711(0.00721) Atom d s d/s (d/s)**2 C7 * -0.0010 0.0019 - 0.547 0.300 C8 * -0.0022 0.0022 - 1.022 1.044 C9 * 0.0076 0.0024 3.196 10.214 C10 * -0.0077 0.0023 - 3.346 11.194 C11 * 0.0029 0.0021 1.390 1.931 C12 * 0.0007 0.0019 0.353 0.125 ============ Sum((d/s)**2) for starred atoms 24.808 Chi-squared at 95% for 3 degrees of freedom: 7.81 The group of atoms deviates significantly from planarityPlane 3 m1 = -0.45957(0.00079) m2 = 0.86478(0.00046) m3 = -0.20235(0.00092) D = 2.02662(0.00192) Atom d s d/s (d/s)**2 C13 * 0.0050 0.0018 2.731 7.457 N3 * -0.0045 0.0018 - 2.513 6.313 C14 * 0.0033 0.0025 1.334 1.780 C16 * 0.0013 0.0026 0.508 0.258 C17 * -0.0009 0.0027 - 0.328 0.108 C18 * -0.0040 0.0024 - 1.686 2.842 ============ Sum((d/s)**2) for starred atoms 18.758 Chi-squared at 95% for 3 degrees of freedom: 7.81 The group of atoms deviates significantly from planarityPlane 4 m1 = -0.44454(0.00100) m2 = -0.15288(0.00101) m3 = -0.88262(0.00050) D = -4.64491(0.00165) Atom d s d/s (d/s)**2 C19 * 0.0128 0.0022 5.712 32.623 C20 * -0.0095 0.0029 - 3.274 10.717 C21 * -0.0074 0.0031 - 2.395 5.738 C22 * 0.0121 0.0031 3.908 15.276 C23 * 0.0012 0.0025 0.480 0.231 C24 * -0.0084 0.0020 - 4.200 17.636 ============ Sum((d/s)**2) for starred atoms 82.221 Chi-squared at 95% for 3 degrees of freedom: 7.81 The group of atoms deviates significantly from planarityDihedral angles formed by LSQ-planes Plane - plane angle (s.u.) angle (s.u.) 1 2 2.52 (0.07) 177.48 (0.07) 1 3 57.16 (0.06) 122.84 (0.06) 1 4 74.84 (0.08) 105.16 (0.08) 2 3 54.91 (0.06) 125.09 (0.06) 2 4 75.67 (0.07) 104.33 (0.07) 3 4 75.48 (0.08) 104.52 (0.08)
xyzUiso*/Ueq
P10.37783 (6)0.42101 (5)0.26648 (4)0.03578 (17)
O40.34114 (19)0.46439 (16)0.37866 (10)0.0459 (4)
N20.16623 (19)0.42897 (18)0.20981 (11)0.0360 (4)
O50.52630 (17)0.51923 (15)0.23013 (11)0.0491 (4)
C240.4304 (3)0.2230 (2)0.26798 (15)0.0399 (4)
C70.0443 (2)0.5645 (2)0.35210 (14)0.0380 (4)
C60.0029 (2)0.4431 (2)0.26737 (15)0.0413 (4)
H6A−0.03160.34380.29130.050*
H6B−0.10170.47030.22550.050*
N3−0.0324 (2)0.2849 (2)0.08712 (13)0.0476 (4)
C120.2155 (3)0.5737 (2)0.40604 (14)0.0374 (4)
C130.1314 (2)0.3663 (2)0.10995 (14)0.0367 (4)
C110.2642 (3)0.6790 (2)0.48673 (15)0.0475 (5)
H110.38090.68260.52100.057*
C8−0.0832 (3)0.6682 (3)0.38261 (16)0.0485 (5)
H8−0.19990.66490.34840.058*
C9−0.0374 (4)0.7763 (3)0.46352 (17)0.0574 (6)
H9−0.12260.84630.48240.069*
C100.1326 (4)0.7804 (3)0.51557 (16)0.0560 (6)
H100.16070.85130.57070.067*
C190.5868 (3)0.1738 (2)0.22629 (17)0.0509 (5)
H190.66310.24280.19590.061*
C14−0.0738 (3)0.2269 (3)−0.00667 (18)0.0579 (6)
C180.2619 (3)0.3908 (3)0.04171 (16)0.0532 (5)
H180.37610.44680.06030.064*
C230.3141 (4)0.1170 (3)0.30964 (18)0.0623 (7)
H230.20760.14870.33700.075*
C200.6295 (4)0.0186 (3)0.2303 (2)0.0683 (8)
H200.7366−0.01450.20440.082*
C160.0481 (3)0.2471 (3)−0.07839 (17)0.0590 (6)
H160.01570.2050−0.14270.071*
C210.5141 (5)−0.0834 (3)0.2720 (2)0.0788 (9)
H210.5424−0.18610.27430.095*
C170.2164 (4)0.3297 (3)−0.05363 (18)0.0643 (6)
H170.29960.3444−0.10110.077*
C220.3571 (5)−0.0350 (3)0.3103 (2)0.0821 (9)
H220.2778−0.10600.33730.099*
C15−0.2625 (4)0.1350 (5)−0.0295 (2)0.1035 (13)
H15A−0.32640.13370.02920.155*
H15B−0.24490.0302−0.05420.155*
H15C−0.33520.1830−0.07800.155*
U11U22U33U12U13U23
P10.0327 (3)0.0325 (3)0.0410 (3)0.00243 (18)−0.00086 (19)0.00089 (19)
O40.0493 (8)0.0471 (8)0.0395 (8)0.0155 (6)−0.0083 (6)−0.0055 (6)
N20.0304 (7)0.0421 (8)0.0352 (9)0.0048 (6)0.0018 (6)0.0017 (6)
O50.0364 (7)0.0426 (8)0.0666 (10)−0.0066 (6)0.0011 (6)0.0077 (7)
C240.0403 (9)0.0348 (9)0.0436 (11)0.0058 (8)−0.0026 (8)0.0014 (8)
C70.0374 (9)0.0386 (10)0.0375 (10)0.0015 (7)0.0071 (8)−0.0011 (8)
C60.0314 (9)0.0468 (11)0.0443 (11)0.0041 (8)0.0008 (8)−0.0013 (8)
N30.0411 (9)0.0550 (10)0.0431 (10)0.0014 (8)−0.0024 (7)−0.0079 (8)
C120.0463 (10)0.0331 (9)0.0334 (10)0.0046 (8)0.0040 (8)0.0050 (7)
C130.0382 (9)0.0363 (9)0.0359 (10)0.0084 (7)0.0000 (8)0.0026 (7)
C110.0627 (13)0.0414 (10)0.0362 (11)0.0036 (9)−0.0041 (9)−0.0004 (8)
C80.0484 (11)0.0517 (12)0.0457 (12)0.0094 (9)0.0072 (9)−0.0001 (9)
C90.0735 (15)0.0510 (12)0.0512 (14)0.0206 (11)0.0170 (12)0.0010 (10)
C100.0829 (16)0.0445 (12)0.0380 (12)0.0049 (11)0.0030 (11)−0.0075 (9)
C190.0358 (10)0.0487 (12)0.0645 (15)0.0038 (9)−0.0003 (9)−0.0105 (10)
C140.0526 (12)0.0661 (15)0.0498 (14)0.0071 (11)−0.0090 (10)−0.0133 (11)
C180.0495 (12)0.0642 (14)0.0446 (13)−0.0043 (10)0.0045 (10)0.0051 (10)
C230.0888 (18)0.0445 (12)0.0616 (16)0.0143 (11)0.0293 (13)0.0215 (10)
C200.0558 (14)0.0600 (15)0.083 (2)0.0210 (12)−0.0106 (13)−0.0255 (14)
C160.0659 (14)0.0711 (16)0.0373 (12)0.0153 (12)−0.0047 (10)−0.0099 (11)
C210.115 (2)0.0425 (13)0.076 (2)0.0263 (15)−0.0259 (17)0.0016 (13)
C170.0723 (16)0.0806 (17)0.0402 (13)0.0067 (13)0.0116 (11)0.0021 (12)
C220.130 (3)0.0433 (13)0.079 (2)0.0139 (16)0.0199 (19)0.0209 (13)
C150.0665 (17)0.157 (3)0.070 (2)−0.0246 (19)−0.0090 (15)−0.045 (2)
P1—O51.4641 (14)C9—C101.369 (3)
P1—O41.5984 (15)C9—H90.9300
P1—N21.6702 (14)C10—H100.9300
P1—C241.7850 (19)C19—C201.406 (3)
O4—C121.407 (2)C19—H190.9300
N2—C131.424 (2)C14—C161.384 (4)
N2—C61.476 (2)C14—C151.522 (3)
C24—C191.383 (3)C18—C171.372 (3)
C24—C231.388 (3)C18—H180.9300
C7—C121.385 (3)C23—C221.376 (3)
C7—C81.395 (3)C23—H230.9300
C7—C61.491 (3)C20—C211.362 (4)
C6—H6A0.9700C20—H200.9300
C6—H6B0.9700C16—C171.366 (3)
N3—C131.331 (2)C16—H160.9300
N3—C141.342 (3)C21—C221.364 (4)
C12—C111.374 (3)C21—H210.9300
C13—C181.397 (3)C17—H170.9300
C11—C101.397 (3)C22—H220.9300
C11—H110.9300C15—H15A0.9600
C8—C91.388 (3)C15—H15B0.9600
C8—H80.9300C15—H15C0.9600
O5—P1—O4114.90 (8)C8—C9—H9119.9
O5—P1—N2114.95 (8)C9—C10—C11120.7 (2)
O4—P1—N2101.68 (7)C9—C10—H10119.7
O5—P1—C24112.80 (9)C11—C10—H10119.7
O4—P1—C24101.38 (8)C24—C19—C20119.4 (2)
N2—P1—C24109.81 (8)C24—C19—H19120.3
C12—O4—P1121.93 (12)C20—C19—H19120.3
C13—N2—C6116.96 (14)N3—C14—C16122.4 (2)
C13—N2—P1118.81 (12)N3—C14—C15115.9 (2)
C6—N2—P1120.30 (13)C16—C14—C15121.7 (2)
C19—C24—C23119.55 (19)C17—C18—C13117.9 (2)
C19—C24—P1119.92 (16)C17—C18—H18121.0
C23—C24—P1120.53 (16)C13—C18—H18121.0
C12—C7—C8117.29 (17)C22—C23—C24119.7 (2)
C12—C7—C6119.26 (16)C22—C23—H23120.2
C8—C7—C6123.43 (17)C24—C23—H23120.2
N2—C6—C7110.86 (15)C21—C20—C19120.2 (2)
N2—C6—H6A109.5C21—C20—H20119.9
C7—C6—H6A109.5C19—C20—H20119.9
N2—C6—H6B109.5C17—C16—C14119.3 (2)
C7—C6—H6B109.5C17—C16—H16120.4
H6A—C6—H6B108.1C14—C16—H16120.4
C13—N3—C14117.66 (19)C20—C21—C22120.0 (2)
C11—C12—C7123.37 (18)C20—C21—H21120.0
C11—C12—O4119.00 (17)C22—C21—H21120.0
C7—C12—O4117.56 (16)C16—C17—C18119.5 (2)
N3—C13—C18123.22 (18)C16—C17—H17120.2
N3—C13—N2115.42 (16)C18—C17—H17120.2
C18—C13—N2121.35 (17)C21—C22—C23121.2 (3)
C12—C11—C10117.8 (2)C21—C22—H22119.4
C12—C11—H11121.1C23—C22—H22119.4
C10—C11—H11121.1C14—C15—H15A109.5
C9—C8—C7120.6 (2)C14—C15—H15B109.5
C9—C8—H8119.7H15A—C15—H15B109.5
C7—C8—H8119.7C14—C15—H15C109.5
C10—C9—C8120.3 (2)H15A—C15—H15C109.5
C10—C9—H9119.9H15B—C15—H15C109.5
O5—P1—O4—C1288.83 (15)C6—N2—C13—N3−19.5 (2)
N2—P1—O4—C12−35.98 (15)P1—N2—C13—N3138.32 (15)
C24—P1—O4—C12−149.22 (14)C6—N2—C13—C18160.12 (19)
O5—P1—N2—C1367.98 (16)P1—N2—C13—C18−42.1 (2)
O4—P1—N2—C13−167.24 (13)C7—C12—C11—C100.5 (3)
C24—P1—N2—C13−60.47 (16)O4—C12—C11—C10−176.41 (18)
O5—P1—N2—C6−134.97 (14)C12—C7—C8—C90.4 (3)
O4—P1—N2—C6−10.20 (16)C6—C7—C8—C9178.5 (2)
C24—P1—N2—C696.57 (15)C7—C8—C9—C10−1.3 (4)
O5—P1—C24—C19−7.5 (2)C8—C9—C10—C111.7 (4)
O4—P1—C24—C19−130.88 (17)C12—C11—C10—C9−1.3 (3)
N2—P1—C24—C19122.15 (17)C23—C24—C19—C20−2.5 (3)
O5—P1—C24—C23173.33 (17)P1—C24—C19—C20178.29 (17)
O4—P1—C24—C2349.93 (19)C13—N3—C14—C160.9 (3)
N2—P1—C24—C23−57.0 (2)C13—N3—C14—C15−179.9 (2)
C13—N2—C6—C7−156.56 (16)N3—C13—C18—C171.1 (3)
P1—N2—C6—C746.0 (2)N2—C13—C18—C17−178.50 (19)
C12—C7—C6—N2−41.6 (3)C19—C24—C23—C220.9 (4)
C8—C7—C6—N2140.36 (19)P1—C24—C23—C22−179.9 (2)
C8—C7—C12—C11−0.1 (3)C24—C19—C20—C212.2 (4)
C6—C7—C12—C11−178.27 (19)N3—C14—C16—C17−0.4 (4)
C8—C7—C12—O4176.88 (18)C15—C14—C16—C17−179.5 (3)
C6—C7—C12—O4−1.3 (3)C19—C20—C21—C22−0.2 (4)
P1—O4—C12—C11−138.17 (16)C14—C16—C17—C180.1 (4)
P1—O4—C12—C744.7 (2)C13—C18—C17—C16−0.4 (4)
C14—N3—C13—C18−1.3 (3)C20—C21—C22—C23−1.4 (4)
C14—N3—C13—N2178.29 (17)C24—C23—C22—C211.0 (4)
D—H···AD—HH···AD···AD—H···A
C17—H17···O5i0.932.573.455 (3)159
C21—H21···O5ii0.932.563.445 (3)159
C18—H18···O50.932.503.158 (3)128
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C17—H17⋯O5i0.932.573.455 (3)159
C21—H21⋯O5ii0.932.563.445 (3)159
C18—H18⋯O50.932.503.158 (3)128

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  3-(6-Methyl-2-pyrid-yl)-2-phen-oxy-3,4-dihydro-1,3,2-benzoxaza-phosphirine 2-oxide.

Authors:  Rajni Kant; Sabeta Kohli; Lovely Sarmal; M Krishnaiah; V H H Surendra Babu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25
  2 in total

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