Literature DB >> 21578296

2-[(2-Carboxyphenyl)disulfanyl]benzoate (1,5-dimethyl-3-oxo-2-phenyl-2,3-di-hydro-1H-pyrazol-4-yl)ammonium.

Jian-Zhong Huo1.   

Abstract

In the title molecular salt, C(11)n class="Species">H(14)N(3)O(+)·C(14)H(9)O(4)S(2) (-), one of the carboxylic groups of the 2,2'-dithio-dibenzoic acid is deprotonated and the exocyclic amino N atom of the 4-amino-anti-pyrine is protonated. In the anion, the dihedral angle between the two benzene rings is 73.51 (5)° and in the cation the dihedral angle between the phenyl ring and the five-membered ring is 65.79 (9)°. In the crystal structure, inter-molecular N-H⋯O and O-H⋯O hydrogen bonds connect the anions and cations into chains along [010].

Entities:  

Year:  2009        PMID: 21578296      PMCID: PMC2971238          DOI: 10.1107/S1600536809036952

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For mol­ecular recognition by intermolecular non-covalent interactions, see Rebek (1990 ▶); Remenar et al. (2003 ▶). For the properties and applications of 4-amino­anti­pyrine and its derivatives, see Wang et al. (2008b ▶); Ismail et al. (1997 ▶); Selvakumar et al. (2007 ▶); Meffin et al. (1977 ▶). For the structures and properties of 2,2′-dithio­dibenzoic acid-based metal complexes and cocrystals, see Basiuk et al. (1999 ▶); Murugavel et al. (2001 ▶); Broker et al. (2007 ▶; 2008 ▶); Meng et al. (2008 ▶); Wang et al, (2008a ▶, 2009 ▶).

Experimental

Crystal data

C11H14N3O+·C14H9O4S2 M = 509.58 Triclinic, a = 9.661 (3) Å b = 10.283 (4) Å c = 13.829 (7) Å α = 99.872 (7)° β = 91.929 (7)° γ = 115.244 (5)° V = 1215.5 (9) Å3 Z = 2 Mo Kα radiation μ = 0.26 mm−1 T = 296 K 0.30 × 0.28 × 0.22 mm

Data collection

Brucker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.926, T max = 0.945 6173 measured reflections 4227 independent reflections 3634 reflections with I > 2σ(I) R int = 0.012

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.100 S = 1.06 4227 reflections 320 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg & Berndt, 1999 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809036952/lh2900sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809036952/lh2900Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H14N3O+·C14H9O4S2Z = 2
Mr = 509.58F(000) = 532
Triclinic, P1Dx = 1.392 Mg m3
a = 9.661 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.283 (4) ÅCell parameters from 4106 reflections
c = 13.829 (7) Åθ = 2.4–27.8°
α = 99.872 (7)°µ = 0.26 mm1
β = 91.929 (7)°T = 296 K
γ = 115.244 (5)°Block, yellow
V = 1215.5 (9) Å30.30 × 0.28 × 0.22 mm
Brucker APEXII CCD area-detector diffractometer4227 independent reflections
Radiation source: fine-focus sealed tube3634 reflections with I > 2σ(I)
graphiteRint = 0.012
phi and ω scansθmax = 25.0°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.926, Tmax = 0.945k = −5→12
6173 measured reflectionsl = −16→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0499P)2 + 0.3886P] where P = (Fo2 + 2Fc2)/3
4227 reflections(Δ/σ)max < 0.001
320 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.79625 (6)0.30246 (6)0.41198 (4)0.04987 (15)
S20.77232 (6)0.46456 (5)0.35447 (3)0.04581 (14)
O20.87236 (18)0.12722 (17)0.49915 (11)0.0596 (4)
O30.78833 (18)0.04135 (19)0.63321 (12)0.0653 (4)
O40.78550 (16)0.67278 (14)0.25767 (10)0.0518 (3)
O50.6376 (2)0.65050 (16)0.12387 (11)0.0703 (5)
H50.69370.73880.13190.105*
C120.6718 (2)0.17200 (19)0.56767 (12)0.0379 (4)
C130.6661 (2)0.26280 (19)0.50372 (12)0.0385 (4)
C140.5566 (2)0.3168 (2)0.51215 (14)0.0450 (4)
H140.55220.37730.47050.054*
C150.4543 (2)0.2822 (2)0.58140 (15)0.0516 (5)
H150.38160.31920.58590.062*
C160.4590 (2)0.1929 (2)0.64402 (15)0.0523 (5)
H160.38970.16930.69060.063*
C170.5674 (2)0.1390 (2)0.63682 (14)0.0452 (4)
H170.57080.07910.67930.054*
C180.7866 (2)0.1099 (2)0.56449 (14)0.0435 (4)
C190.5772 (2)0.44117 (19)0.19213 (12)0.0411 (4)
C200.6068 (2)0.36948 (19)0.26285 (12)0.0399 (4)
C210.5030 (2)0.2243 (2)0.26044 (14)0.0504 (5)
H210.51920.17610.30760.060*
C220.3767 (3)0.1507 (2)0.18949 (16)0.0577 (5)
H220.30830.05420.18990.069*
C230.3508 (3)0.2184 (2)0.11810 (16)0.0591 (5)
H230.26750.16730.06900.071*
C240.4498 (3)0.3629 (2)0.12028 (14)0.0537 (5)
H240.43140.40950.07280.064*
C250.6773 (2)0.5980 (2)0.19429 (13)0.0432 (4)
O10.7722 (2)−0.07506 (15)0.13515 (11)0.0708 (5)
N11.0500 (2)0.28242 (17)0.21502 (13)0.0522 (4)
N20.9294 (2)0.17231 (17)0.14899 (12)0.0544 (4)
N30.95999 (18)−0.01942 (17)0.33782 (11)0.0420 (4)
H3A1.0521−0.01630.35170.063*
H3B0.8939−0.11040.30820.063*
H3C0.92660.00710.39360.063*
C10.8789 (2)0.0433 (2)0.18279 (14)0.0479 (5)
C20.9719 (2)0.07944 (19)0.27335 (13)0.0381 (4)
C31.0727 (2)0.2242 (2)0.29096 (14)0.0451 (4)
C41.1063 (3)0.4359 (2)0.2109 (2)0.0746 (7)
H4A1.02280.46300.21470.112*
H4B1.14880.45190.14990.112*
H4C1.18470.49470.26540.112*
C50.8733 (2)0.1957 (2)0.05991 (14)0.0473 (5)
C60.9637 (3)0.2291 (3)−0.01490 (19)0.0736 (7)
H61.06230.2347−0.00890.088*
C70.9072 (4)0.2545 (3)−0.09933 (19)0.0868 (9)
H70.96850.2780−0.15010.104*
C80.7649 (4)0.2455 (3)−0.10844 (19)0.0796 (8)
H80.72950.2661−0.16460.096*
C90.6711 (4)0.2065 (3)−0.0363 (2)0.0816 (8)
H90.57090.1966−0.04490.098*
C100.7251 (3)0.1817 (3)0.04980 (17)0.0643 (6)
H100.66230.15620.09960.077*
C111.1906 (3)0.3128 (3)0.37761 (18)0.0691 (6)
H11A1.28750.36770.35510.104*
H11B1.20170.24860.41690.104*
H11C1.15860.37930.41680.104*
U11U22U33U12U13U23
S10.0581 (3)0.0600 (3)0.0518 (3)0.0376 (3)0.0180 (2)0.0287 (2)
S20.0526 (3)0.0423 (3)0.0456 (3)0.0208 (2)0.0031 (2)0.0176 (2)
O20.0725 (10)0.0751 (10)0.0613 (9)0.0521 (8)0.0246 (8)0.0331 (8)
O30.0657 (9)0.0869 (11)0.0742 (10)0.0483 (9)0.0208 (8)0.0522 (9)
O40.0579 (8)0.0390 (7)0.0534 (8)0.0144 (6)−0.0025 (7)0.0175 (6)
O50.1014 (13)0.0418 (8)0.0523 (8)0.0151 (8)−0.0180 (8)0.0205 (7)
C120.0403 (9)0.0369 (9)0.0357 (9)0.0164 (8)−0.0008 (7)0.0082 (7)
C130.0435 (9)0.0384 (9)0.0352 (9)0.0197 (8)0.0010 (7)0.0081 (7)
C140.0530 (11)0.0489 (11)0.0423 (10)0.0299 (9)0.0030 (8)0.0128 (8)
C150.0510 (11)0.0622 (13)0.0517 (11)0.0343 (10)0.0082 (9)0.0115 (10)
C160.0507 (11)0.0627 (13)0.0483 (11)0.0273 (10)0.0135 (9)0.0159 (10)
C170.0496 (11)0.0457 (10)0.0424 (10)0.0204 (9)0.0045 (8)0.0158 (8)
C180.0467 (10)0.0448 (10)0.0442 (10)0.0230 (9)0.0022 (8)0.0148 (8)
C190.0538 (11)0.0369 (9)0.0336 (9)0.0197 (8)0.0073 (8)0.0099 (7)
C200.0527 (10)0.0356 (9)0.0341 (9)0.0210 (8)0.0085 (8)0.0092 (7)
C210.0682 (13)0.0366 (10)0.0459 (10)0.0204 (9)0.0075 (9)0.0143 (8)
C220.0692 (14)0.0354 (10)0.0555 (12)0.0116 (10)0.0069 (10)0.0074 (9)
C230.0633 (13)0.0485 (12)0.0496 (12)0.0130 (10)−0.0064 (10)0.0035 (10)
C240.0676 (13)0.0500 (12)0.0406 (10)0.0222 (10)−0.0005 (9)0.0134 (9)
C250.0579 (12)0.0404 (10)0.0343 (9)0.0219 (9)0.0082 (9)0.0136 (8)
O10.0899 (11)0.0384 (8)0.0604 (9)0.0052 (8)−0.0302 (8)0.0196 (7)
N10.0551 (10)0.0353 (8)0.0576 (10)0.0109 (7)−0.0019 (8)0.0138 (7)
N20.0644 (11)0.0375 (9)0.0512 (9)0.0111 (8)−0.0097 (8)0.0177 (7)
N30.0460 (8)0.0442 (8)0.0392 (8)0.0217 (7)0.0008 (6)0.0134 (7)
C10.0586 (12)0.0371 (10)0.0438 (10)0.0152 (9)−0.0030 (9)0.0153 (8)
C20.0412 (9)0.0383 (9)0.0375 (9)0.0188 (8)0.0030 (7)0.0110 (7)
C30.0457 (10)0.0430 (10)0.0463 (10)0.0194 (9)0.0020 (8)0.0096 (8)
C40.0852 (17)0.0384 (12)0.0888 (18)0.0133 (11)0.0020 (14)0.0231 (12)
C50.0616 (12)0.0379 (10)0.0455 (10)0.0216 (9)0.0034 (9)0.0175 (8)
C60.0665 (15)0.0874 (18)0.0727 (16)0.0297 (13)0.0191 (12)0.0403 (14)
C70.104 (2)0.086 (2)0.0589 (15)0.0217 (17)0.0183 (15)0.0382 (14)
C80.119 (2)0.0490 (13)0.0605 (15)0.0255 (14)−0.0183 (15)0.0213 (11)
C90.094 (2)0.0870 (19)0.0804 (18)0.0587 (17)−0.0129 (15)0.0139 (15)
C100.0746 (15)0.0760 (16)0.0574 (13)0.0460 (13)0.0114 (11)0.0161 (11)
C110.0650 (14)0.0538 (13)0.0676 (15)0.0113 (11)−0.0175 (12)0.0049 (11)
S1—C131.7901 (19)O1—C11.260 (2)
S1—S22.0580 (9)N1—C31.350 (2)
S2—C201.796 (2)N1—N21.387 (2)
O2—C181.231 (2)N1—C41.446 (3)
O3—C181.280 (2)N2—C11.376 (2)
O4—C251.214 (2)N2—C51.427 (2)
O5—C251.311 (2)N3—C21.435 (2)
O5—H50.8200N3—H3A0.8900
C12—C171.390 (3)N3—H3B0.8900
C12—C131.407 (2)N3—H3C0.8900
C12—C181.496 (3)C1—C21.412 (3)
C13—C141.389 (3)C2—C31.359 (3)
C14—C151.379 (3)C3—C111.487 (3)
C14—H140.9300C4—H4A0.9600
C15—C161.378 (3)C4—H4B0.9600
C15—H150.9300C4—H4C0.9600
C16—C171.377 (3)C5—C61.370 (3)
C16—H160.9300C5—C101.377 (3)
C17—H170.9300C6—C71.383 (4)
C19—C241.396 (3)C6—H60.9300
C19—C201.410 (2)C7—C81.337 (4)
C19—C251.479 (3)C7—H70.9300
C20—C211.393 (3)C8—C91.365 (4)
C21—C221.379 (3)C8—H80.9300
C21—H210.9300C9—C101.390 (3)
C22—C231.375 (3)C9—H90.9300
C22—H220.9300C10—H100.9300
C23—C241.376 (3)C11—H11A0.9600
C23—H230.9300C11—H11B0.9600
C24—H240.9300C11—H11C0.9600
C13—S1—S2105.53 (6)C1—N2—N1109.44 (15)
C20—S2—S1105.13 (6)C1—N2—C5127.62 (16)
C25—O5—H5109.5N1—N2—C5122.93 (15)
C17—C12—C13118.95 (17)C2—N3—H3A109.5
C17—C12—C18118.54 (16)C2—N3—H3B109.5
C13—C12—C18122.51 (16)H3A—N3—H3B109.5
C14—C13—C12118.82 (16)C2—N3—H3C109.5
C14—C13—S1121.61 (14)H3A—N3—H3C109.5
C12—C13—S1119.55 (13)H3B—N3—H3C109.5
C15—C14—C13121.01 (17)O1—C1—N2122.29 (17)
C15—C14—H14119.5O1—C1—C2132.74 (17)
C13—C14—H14119.5N2—C1—C2104.97 (16)
C16—C15—C14120.43 (18)C3—C2—C1109.02 (16)
C16—C15—H15119.8C3—C2—N3125.26 (16)
C14—C15—H15119.8C1—C2—N3125.71 (16)
C17—C16—C15119.23 (18)N1—C3—C2108.82 (16)
C17—C16—H16120.4N1—C3—C11122.47 (18)
C15—C16—H16120.4C2—C3—C11128.71 (18)
C16—C17—C12121.57 (18)N1—C4—H4A109.5
C16—C17—H17119.2N1—C4—H4B109.5
C12—C17—H17119.2H4A—C4—H4B109.5
O2—C18—O3124.23 (18)N1—C4—H4C109.5
O2—C18—C12120.14 (16)H4A—C4—H4C109.5
O3—C18—C12115.62 (17)H4B—C4—H4C109.5
C24—C19—C20119.15 (17)C6—C5—C10120.4 (2)
C24—C19—C25119.83 (16)C6—C5—N2121.0 (2)
C20—C19—C25121.01 (16)C10—C5—N2118.60 (19)
C21—C20—C19118.20 (17)C5—C6—C7119.6 (3)
C21—C20—S2121.18 (14)C5—C6—H6120.2
C19—C20—S2120.61 (14)C7—C6—H6120.2
C22—C21—C20121.23 (18)C8—C7—C6120.4 (3)
C22—C21—H21119.4C8—C7—H7119.8
C20—C21—H21119.4C6—C7—H7119.8
C23—C22—C21120.71 (19)C7—C8—C9120.8 (2)
C23—C22—H22119.6C7—C8—H8119.6
C21—C22—H22119.6C9—C8—H8119.6
C22—C23—C24119.10 (19)C8—C9—C10120.1 (3)
C22—C23—H23120.4C8—C9—H9119.9
C24—C23—H23120.4C10—C9—H9119.9
C23—C24—C19121.53 (19)C5—C10—C9118.6 (2)
C23—C24—H24119.2C5—C10—H10120.7
C19—C24—H24119.2C9—C10—H10120.7
O4—C25—O5122.76 (17)C3—C11—H11A109.5
O4—C25—C19122.53 (16)C3—C11—H11B109.5
O5—C25—C19114.70 (17)H11A—C11—H11B109.5
C3—N1—N2107.74 (15)C3—C11—H11C109.5
C3—N1—C4128.07 (19)H11A—C11—H11C109.5
N2—N1—C4122.29 (18)H11B—C11—H11C109.5
C13—S1—S2—C20−83.01 (9)C20—C19—C25—O5179.46 (17)
C17—C12—C13—C140.2 (3)C3—N1—N2—C1−1.6 (2)
C18—C12—C13—C14−179.47 (17)C4—N1—N2—C1−167.0 (2)
C17—C12—C13—S1−178.34 (13)C3—N1—N2—C5179.52 (19)
C18—C12—C13—S12.0 (2)C4—N1—N2—C514.1 (3)
S2—S1—C13—C1411.17 (17)N1—N2—C1—O1−178.3 (2)
S2—S1—C13—C12−170.30 (13)C5—N2—C1—O10.6 (4)
C12—C13—C14—C15−0.3 (3)N1—N2—C1—C21.1 (2)
S1—C13—C14—C15178.23 (15)C5—N2—C1—C2179.9 (2)
C13—C14—C15—C160.1 (3)O1—C1—C2—C3179.0 (2)
C14—C15—C16—C170.2 (3)N2—C1—C2—C3−0.2 (2)
C15—C16—C17—C12−0.3 (3)O1—C1—C2—N3−2.3 (4)
C13—C12—C17—C160.0 (3)N2—C1—C2—N3178.49 (17)
C18—C12—C17—C16179.76 (18)N2—N1—C3—C21.4 (2)
C17—C12—C18—O2174.18 (18)C4—N1—C3—C2165.8 (2)
C13—C12—C18—O2−6.1 (3)N2—N1—C3—C11−177.9 (2)
C17—C12—C18—O3−6.3 (3)C4—N1—C3—C11−13.6 (3)
C13—C12—C18—O3173.36 (17)C1—C2—C3—N1−0.8 (2)
C24—C19—C20—C21−2.7 (3)N3—C2—C3—N1−179.45 (17)
C25—C19—C20—C21176.19 (17)C1—C2—C3—C11178.5 (2)
C24—C19—C20—S2178.30 (15)N3—C2—C3—C11−0.2 (3)
C25—C19—C20—S2−2.9 (2)C1—N2—C5—C6−113.0 (3)
S1—S2—C20—C2116.17 (17)N1—N2—C5—C665.7 (3)
S1—S2—C20—C19−164.81 (13)C1—N2—C5—C1066.0 (3)
C19—C20—C21—C221.6 (3)N1—N2—C5—C10−115.3 (2)
S2—C20—C21—C22−179.32 (16)C10—C5—C6—C72.5 (4)
C20—C21—C22—C230.8 (3)N2—C5—C6—C7−178.5 (2)
C21—C22—C23—C24−2.3 (4)C5—C6—C7—C8−0.5 (4)
C22—C23—C24—C191.2 (3)C6—C7—C8—C9−2.2 (4)
C20—C19—C24—C231.3 (3)C7—C8—C9—C102.8 (4)
C25—C19—C24—C23−177.6 (2)C6—C5—C10—C9−1.9 (4)
C24—C19—C25—O4176.68 (19)N2—C5—C10—C9179.1 (2)
C20—C19—C25—O4−2.2 (3)C8—C9—C10—C5−0.7 (4)
C24—C19—C25—O5−1.7 (3)
D—H···AD—HH···AD···AD—H···A
O5—H5···O1i0.821.722.527 (2)166
N3—H3A···O3ii0.891.682.561 (2)170
N3—H3B···O4iii0.892.002.865 (2)165
N3—H3C···O20.891.982.834 (2)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5⋯O1i0.821.722.527 (2)166
N3—H3A⋯O3ii0.891.682.561 (2)170
N3—H3B⋯O4iii0.892.002.865 (2)165
N3—H3C⋯O20.891.982.834 (2)161

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Reactions of 2-mercaptobenzoic acid with divalent alkaline earth metal ions: synthesis, spectral studies, and single-crystal X-ray structures of calcium, strontium, and barium complexes of 2,2'-dithiobis(benzoic acid).

Authors:  R Murugavel; K Baheti; G Anantharaman
Journal:  Inorg Chem       Date:  2001-12-31       Impact factor: 5.165

3.  Application of salivary concentration data to pharmacokinetic studies with antipyrine.

Authors:  P J Meffin; R L Williams; T F Blaschke; M Rowland
Journal:  J Pharm Sci       Date:  1977-01       Impact factor: 3.534

4.  Hydrogen-bonded layers in the 1:2 cocrystal of 2,2'-dithiodibenzoic acid with isonicotinohydrazide.

Authors:  Xiang-Gao Meng; Yi-Long Xiao; Hang Zhang; Chun-Shan Zhou
Journal:  Acta Crystallogr C       Date:  2008-04-09       Impact factor: 1.172

5.  Crystal engineering of novel cocrystals of a triazole drug with 1,4-dicarboxylic acids.

Authors:  Julius F Remenar; Sherry L Morissette; Matthew L Peterson; Brian Moulton; J Michael MacPhee; Héctor R Guzmán; Orn Almarsson
Journal:  J Am Chem Soc       Date:  2003-07-16       Impact factor: 15.419

6.  Hydrogen-bonded zigzag chains in 2,2'-dithiodibenzoic acid-1,3-di-4-pyridylpropane (1/1).

Authors:  Li-Li Wang; Hong Chang; En-Cui Yang
Journal:  Acta Crystallogr C       Date:  2009-08-26       Impact factor: 1.172

  6 in total

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