| Literature DB >> 21578248 |
Abstract
In the title compound, 2C(4)H(7)N(2) (+)·C(4)H(2)O(4) (2-)·2H(2)O, the asymmetric unit consists of one 2-methyl-imidazolium cation, half a fumarate dianion and one water mol-ecule. There is an inversion center at the mid-point of the central C-C bond of the fumarate anion. In the crystal structure, mol-ecules are linked into a three-dimensional network by inter-molecular N-H⋯O, O-H⋯O and weak C-H⋯O hydrogen bonds. In addition, there are weak π-π stacking inter-actions with centroid-centroid distances of 3.640 (1) Å.Entities:
Year: 2009 PMID: 21578248 PMCID: PMC2971242 DOI: 10.1107/S160053680903952X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C4H7N2+·C4H2O42−·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 430 reflections |
| θ = 3.0–22.0° | |
| µ = 0.10 mm−1 | |
| β = 106.624 (2)° | Plate, colorless |
| 0.20 × 0.10 × 0.04 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 1920 independent reflections |
| Radiation source: fine focus sealed Siemens Mo tube | 1261 reflections with |
| graphite | |
| 0.3° wide ω exposures scans | θmax = 27.5°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 9171 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1920 reflections | (Δ/σ)max = 0.027 |
| 114 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C1 | 0.5386 (2) | 0.0238 (2) | 0.37212 (12) | 0.0401 (4) | |
| C2 | 0.5606 (2) | 0.0086 (2) | 0.48028 (11) | 0.0428 (5) | |
| H2 | 0.6685 | 0.0117 | 0.5220 | 0.051* | |
| C3 | 0.6978 (3) | 0.1228 (2) | 0.10113 (13) | 0.0471 (5) | |
| C4 | 0.4614 (3) | 0.2353 (3) | 0.11177 (14) | 0.0539 (5) | |
| H4 | 0.3750 | 0.2682 | 0.1372 | 0.065* | |
| C5 | 0.4689 (3) | 0.2673 (3) | 0.02039 (14) | 0.0516 (5) | |
| H5 | 0.3895 | 0.3266 | −0.0294 | 0.062* | |
| C6 | 0.8635 (3) | 0.0358 (3) | 0.12642 (17) | 0.0702 (7) | |
| H6A | 0.9432 | 0.1142 | 0.1698 | 0.105* | |
| H6B | 0.8958 | 0.0159 | 0.0678 | 0.105* | |
| H6C | 0.8593 | −0.0791 | 0.1581 | 0.105* | |
| N1 | 0.6039 (2) | 0.1456 (2) | 0.16080 (11) | 0.0517 (5) | |
| H1A | 0.633 (2) | 0.101 (3) | 0.2268 (16) | 0.062* | |
| N2 | 0.6165 (2) | 0.1953 (2) | 0.01497 (11) | 0.0482 (5) | |
| H2A | 0.654 (3) | 0.191 (3) | −0.0380 (18) | 0.074 (7)* | |
| O1 | 0.66885 (18) | 0.0373 (2) | 0.34674 (9) | 0.0569 (4) | |
| O2 | 0.39407 (17) | 0.0221 (2) | 0.31492 (8) | 0.0556 (4) | |
| O3 | 0.2028 (3) | 0.3054 (3) | 0.34768 (13) | 0.1009 (8) | |
| H3B | 0.172 (5) | 0.371 (6) | 0.301 (3) | 0.151* | |
| H3A | 0.256 (5) | 0.221 (5) | 0.335 (3) | 0.151* |
| C1 | 0.0536 (12) | 0.0402 (9) | 0.0280 (8) | 0.0051 (8) | 0.0144 (8) | 0.0001 (7) |
| C2 | 0.0490 (12) | 0.0515 (11) | 0.0276 (9) | 0.0012 (9) | 0.0102 (7) | 0.0001 (7) |
| C3 | 0.0631 (13) | 0.0426 (10) | 0.0375 (9) | −0.0092 (9) | 0.0172 (9) | −0.0010 (8) |
| C4 | 0.0635 (14) | 0.0604 (13) | 0.0422 (10) | −0.0028 (11) | 0.0224 (10) | 0.0006 (9) |
| C5 | 0.0624 (14) | 0.0513 (11) | 0.0402 (10) | −0.0050 (10) | 0.0132 (9) | 0.0023 (8) |
| C6 | 0.0735 (17) | 0.0671 (15) | 0.0718 (15) | 0.0029 (12) | 0.0235 (13) | 0.0024 (12) |
| N1 | 0.0688 (12) | 0.0565 (10) | 0.0318 (8) | −0.0064 (9) | 0.0178 (8) | 0.0032 (7) |
| N2 | 0.0685 (12) | 0.0476 (9) | 0.0327 (8) | −0.0111 (8) | 0.0210 (8) | −0.0010 (7) |
| O1 | 0.0581 (9) | 0.0826 (11) | 0.0349 (7) | 0.0046 (7) | 0.0214 (6) | 0.0103 (6) |
| O2 | 0.0570 (9) | 0.0780 (10) | 0.0302 (6) | 0.0073 (7) | 0.0100 (6) | −0.0072 (6) |
| O3 | 0.150 (2) | 0.1188 (17) | 0.0515 (9) | 0.0793 (14) | 0.0575 (12) | 0.0364 (10) |
| C1—O1 | 1.249 (2) | C4—H4 | 0.9300 |
| C1—O2 | 1.253 (2) | C5—N2 | 1.368 (3) |
| C1—C2 | 1.503 (2) | C5—H5 | 0.9300 |
| C2—C2i | 1.301 (3) | C6—H6A | 0.9600 |
| C2—H2 | 0.9300 | C6—H6B | 0.9600 |
| C3—N1 | 1.325 (2) | C6—H6C | 0.9600 |
| C3—N2 | 1.332 (2) | N1—H1A | 0.96 (2) |
| C3—C6 | 1.477 (3) | N2—H2A | 0.90 (2) |
| C4—C5 | 1.342 (3) | O3—H3B | 0.80 (4) |
| C4—N1 | 1.368 (3) | O3—H3A | 0.81 (4) |
| O1—C1—O2 | 125.22 (15) | N2—C5—H5 | 126.8 |
| O1—C1—C2 | 116.20 (16) | C3—C6—H6A | 109.5 |
| O2—C1—C2 | 118.57 (17) | C3—C6—H6B | 109.5 |
| C2i—C2—C1 | 124.6 (2) | H6A—C6—H6B | 109.5 |
| C2i—C2—H2 | 117.7 | C3—C6—H6C | 109.5 |
| C1—C2—H2 | 117.7 | H6A—C6—H6C | 109.5 |
| N1—C3—N2 | 107.42 (19) | H6B—C6—H6C | 109.5 |
| N1—C3—C6 | 126.08 (18) | C3—N1—C4 | 109.04 (16) |
| N2—C3—C6 | 126.5 (2) | C3—N1—H1A | 123.6 (13) |
| C5—C4—N1 | 107.61 (19) | C4—N1—H1A | 127.4 (13) |
| C5—C4—H4 | 126.2 | C3—N2—C5 | 109.55 (17) |
| N1—C4—H4 | 126.2 | C3—N2—H2A | 123.4 (15) |
| C4—C5—N2 | 106.38 (19) | C5—N2—H2A | 127.0 (15) |
| C4—C5—H5 | 126.8 | H3B—O3—H3A | 110 (3) |
| O1—C1—C2—C2i | −179.1 (2) | C5—C4—N1—C3 | 0.1 (2) |
| O2—C1—C2—C2i | 0.9 (3) | N1—C3—N2—C5 | 0.7 (2) |
| N1—C4—C5—N2 | 0.3 (2) | C6—C3—N2—C5 | −178.31 (19) |
| N2—C3—N1—C4 | −0.5 (2) | C4—C5—N2—C3 | −0.6 (2) |
| C6—C3—N1—C4 | 178.5 (2) |
| H··· | ||||
| N2—H2A···O3ii | 0.90 (2) | 1.79 (2) | 2.682 (2) | 172 (2) |
| O3—H3B···O2iii | 0.80 (4) | 1.94 (4) | 2.733 (2) | 177 (4) |
| C5—H5···O1iv | 0.93 | 2.38 | 3.308 (3) | 175 |
| N1—H1A···O1 | 0.96 (2) | 1.71 (2) | 2.668 (2) | 173 (2) |
| O3—H3A···O2 | 0.81 (4) | 1.94 (4) | 2.742 (2) | 176 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.90 (2) | 1.79 (2) | 2.682 (2) | 172 (2) |
| O3—H3 | 0.80 (4) | 1.94 (4) | 2.733 (2) | 177 (4) |
| C5—H5⋯O1iii | 0.93 | 2.38 | 3.308 (3) | 175 |
| N1—H1 | 0.96 (2) | 1.71 (2) | 2.668 (2) | 173 (2) |
| O3—H3 | 0.81 (4) | 1.94 (4) | 2.742 (2) | 176 (4) |
Symmetry codes: (i) ; (ii) ; (iii) .