Literature DB >> 21578248

Bis(2-methyl-imidazolium) fumarate dihydrate.

Zhiyuan Xie1.   

Abstract

In the title compound, 2C(4)H(7)N(2) (+)·C(4)H(2)O(4) (2-)·2H(2)O, the asymmetric unit consists of one 2-methyl-imidazolium cation, half a fumarate dianion and one water mol-ecule. There is an inversion center at the mid-point of the central C-C bond of the fumarate anion. In the crystal structure, mol-ecules are linked into a three-dimensional network by inter-molecular N-H⋯O, O-H⋯O and weak C-H⋯O hydrogen bonds. In addition, there are weak π-π stacking inter-actions with centroid-centroid distances of 3.640 (1) Å.

Entities:  

Year:  2009        PMID: 21578248      PMCID: PMC2971242          DOI: 10.1107/S160053680903952X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information on cocrystals, see: Aakeröy & Salmon (2005 ▶); Aakeröy et al. (2007 ▶); Childs & Hardcastle (2007 ▶); Childs et al. (2007 ▶).

Experimental

Crystal data

2C4H7N2C4H2O4 2−·2H2O M = 316.32 Monoclinic, a = 8.3912 (8) Å b = 7.3195 (7) Å c = 14.2475 (13) Å β = 106.624 (2)° V = 838.50 (14) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 294 K 0.20 × 0.10 × 0.04 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.970, T max = 0.996 9171 measured reflections 1920 independent reflections 1261 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.152 S = 1.06 1920 reflections 114 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903952X/lh2915sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680903952X/lh2915Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C4H7N2+·C4H2O42·2H2OF(000) = 336
Mr = 316.32Dx = 1.253 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 430 reflections
a = 8.3912 (8) Åθ = 3.0–22.0°
b = 7.3195 (7) ŵ = 0.10 mm1
c = 14.2475 (13) ÅT = 294 K
β = 106.624 (2)°Plate, colorless
V = 838.50 (14) Å30.20 × 0.10 × 0.04 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer1920 independent reflections
Radiation source: fine focus sealed Siemens Mo tube1261 reflections with I > 2σ(I)
graphiteRint = 0.036
0.3° wide ω exposures scansθmax = 27.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→10
Tmin = 0.970, Tmax = 0.996k = −9→9
9171 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.152H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.071P)2 + 0.1419P] where P = (Fo2 + 2Fc2)/3
1920 reflections(Δ/σ)max = 0.027
114 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5386 (2)0.0238 (2)0.37212 (12)0.0401 (4)
C20.5606 (2)0.0086 (2)0.48028 (11)0.0428 (5)
H20.66850.01170.52200.051*
C30.6978 (3)0.1228 (2)0.10113 (13)0.0471 (5)
C40.4614 (3)0.2353 (3)0.11177 (14)0.0539 (5)
H40.37500.26820.13720.065*
C50.4689 (3)0.2673 (3)0.02039 (14)0.0516 (5)
H50.38950.3266−0.02940.062*
C60.8635 (3)0.0358 (3)0.12642 (17)0.0702 (7)
H6A0.94320.11420.16980.105*
H6B0.89580.01590.06780.105*
H6C0.8593−0.07910.15810.105*
N10.6039 (2)0.1456 (2)0.16080 (11)0.0517 (5)
H1A0.633 (2)0.101 (3)0.2268 (16)0.062*
N20.6165 (2)0.1953 (2)0.01497 (11)0.0482 (5)
H2A0.654 (3)0.191 (3)−0.0380 (18)0.074 (7)*
O10.66885 (18)0.0373 (2)0.34674 (9)0.0569 (4)
O20.39407 (17)0.0221 (2)0.31492 (8)0.0556 (4)
O30.2028 (3)0.3054 (3)0.34768 (13)0.1009 (8)
H3B0.172 (5)0.371 (6)0.301 (3)0.151*
H3A0.256 (5)0.221 (5)0.335 (3)0.151*
U11U22U33U12U13U23
C10.0536 (12)0.0402 (9)0.0280 (8)0.0051 (8)0.0144 (8)0.0001 (7)
C20.0490 (12)0.0515 (11)0.0276 (9)0.0012 (9)0.0102 (7)0.0001 (7)
C30.0631 (13)0.0426 (10)0.0375 (9)−0.0092 (9)0.0172 (9)−0.0010 (8)
C40.0635 (14)0.0604 (13)0.0422 (10)−0.0028 (11)0.0224 (10)0.0006 (9)
C50.0624 (14)0.0513 (11)0.0402 (10)−0.0050 (10)0.0132 (9)0.0023 (8)
C60.0735 (17)0.0671 (15)0.0718 (15)0.0029 (12)0.0235 (13)0.0024 (12)
N10.0688 (12)0.0565 (10)0.0318 (8)−0.0064 (9)0.0178 (8)0.0032 (7)
N20.0685 (12)0.0476 (9)0.0327 (8)−0.0111 (8)0.0210 (8)−0.0010 (7)
O10.0581 (9)0.0826 (11)0.0349 (7)0.0046 (7)0.0214 (6)0.0103 (6)
O20.0570 (9)0.0780 (10)0.0302 (6)0.0073 (7)0.0100 (6)−0.0072 (6)
O30.150 (2)0.1188 (17)0.0515 (9)0.0793 (14)0.0575 (12)0.0364 (10)
C1—O11.249 (2)C4—H40.9300
C1—O21.253 (2)C5—N21.368 (3)
C1—C21.503 (2)C5—H50.9300
C2—C2i1.301 (3)C6—H6A0.9600
C2—H20.9300C6—H6B0.9600
C3—N11.325 (2)C6—H6C0.9600
C3—N21.332 (2)N1—H1A0.96 (2)
C3—C61.477 (3)N2—H2A0.90 (2)
C4—C51.342 (3)O3—H3B0.80 (4)
C4—N11.368 (3)O3—H3A0.81 (4)
O1—C1—O2125.22 (15)N2—C5—H5126.8
O1—C1—C2116.20 (16)C3—C6—H6A109.5
O2—C1—C2118.57 (17)C3—C6—H6B109.5
C2i—C2—C1124.6 (2)H6A—C6—H6B109.5
C2i—C2—H2117.7C3—C6—H6C109.5
C1—C2—H2117.7H6A—C6—H6C109.5
N1—C3—N2107.42 (19)H6B—C6—H6C109.5
N1—C3—C6126.08 (18)C3—N1—C4109.04 (16)
N2—C3—C6126.5 (2)C3—N1—H1A123.6 (13)
C5—C4—N1107.61 (19)C4—N1—H1A127.4 (13)
C5—C4—H4126.2C3—N2—C5109.55 (17)
N1—C4—H4126.2C3—N2—H2A123.4 (15)
C4—C5—N2106.38 (19)C5—N2—H2A127.0 (15)
C4—C5—H5126.8H3B—O3—H3A110 (3)
O1—C1—C2—C2i−179.1 (2)C5—C4—N1—C30.1 (2)
O2—C1—C2—C2i0.9 (3)N1—C3—N2—C50.7 (2)
N1—C4—C5—N20.3 (2)C6—C3—N2—C5−178.31 (19)
N2—C3—N1—C4−0.5 (2)C4—C5—N2—C3−0.6 (2)
C6—C3—N1—C4178.5 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O3ii0.90 (2)1.79 (2)2.682 (2)172 (2)
O3—H3B···O2iii0.80 (4)1.94 (4)2.733 (2)177 (4)
C5—H5···O1iv0.932.383.308 (3)175
N1—H1A···O10.96 (2)1.71 (2)2.668 (2)173 (2)
O3—H3A···O20.81 (4)1.94 (4)2.742 (2)176 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O3i0.90 (2)1.79 (2)2.682 (2)172 (2)
O3—H3B⋯O2ii0.80 (4)1.94 (4)2.733 (2)177 (4)
C5—H5⋯O1iii0.932.383.308 (3)175
N1—H1A⋯O10.96 (2)1.71 (2)2.668 (2)173 (2)
O3—H3A⋯O20.81 (4)1.94 (4)2.742 (2)176 (4)

Symmetry codes: (i) ; (ii) ; (iii) .

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2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Cocrystal or salt: does it really matter?

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4.  Structure validation in chemical crystallography.

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