Literature DB >> 21578242

4-Carbamoylpyridinium perchlorate.

Li-Zhuang Chen1.   

Abstract

In the cation of the title compound, C(6)H(7)N(2)O(+)·ClO(4) (-), the amide group is oriented at a dihedral angle of 10.41 (17)° to the benzene ring. The crystal structure is stabilized by inter-molecular N-H⋯O hydrogen bonding.

Entities:  

Year:  2009        PMID: 21578242      PMCID: PMC2971442          DOI: 10.1107/S1600536809039026

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to structural features and physical properties of simple mol­ecular–ionic crystals containing organic cations and acid radicals (1:1 molar ratio), see: Czupiński et al. (2002 ▶); Katrusiak & Szafrański (1999 ▶, 2006 ▶). For the crystal structure of 4-carbamoylpyridinium dihydrogen phosphate, see: Gholivand et al. (2007 ▶) and for that of 3-(amino­carbon­yl)pyridinium perchlorate, see: Athimoolam & Natarajan (2007 ▶).

Experimental

Crystal data

C6H7N2O+·ClO4 M = 222.59 Monoclinic, a = 10.935 (2) Å b = 10.082 (2) Å c = 8.2021 (16) Å β = 99.37 (3)° V = 892.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.43 mm−1 T = 293 K 0.30 × 0.25 × 0.22 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.87, T max = 0.90 8863 measured reflections 2033 independent reflections 1421 reflections with I > 2σ(I) R int = 0.074

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.176 S = 1.04 2033 reflections 127 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.42 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809039026/xu2591sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039026/xu2591Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H7N2O+·ClO4F(000) = 456
Mr = 222.59Dx = 1.657 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1421 reflections
a = 10.935 (2) Åθ = 3.2–27.5°
b = 10.082 (2) ŵ = 0.43 mm1
c = 8.2021 (16) ÅT = 293 K
β = 99.37 (3)°Block, colorless
V = 892.2 (3) Å30.30 × 0.25 × 0.22 mm
Z = 4
Rigaku SCXmini diffractometer2033 independent reflections
Radiation source: fine-focus sealed tube1421 reflections with I > 2σ(I)
graphiteRint = 0.074
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.2°
ω scansh = −14→14
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −13→13
Tmin = 0.87, Tmax = 0.90l = −10→10
8863 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.176H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0844P)2 + 0.3072P] where P = (Fo2 + 2Fc2)/3
2033 reflections(Δ/σ)max < 0.001
127 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.42 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.35049 (7)0.39747 (7)0.09900 (9)0.0473 (3)
O50.0368 (2)0.8048 (2)0.2309 (3)0.0650 (7)
N2−0.0251 (3)0.5945 (3)0.1873 (4)0.0698 (10)
H2A−0.08620.61690.11270.084*
H2B−0.01280.51230.21300.084*
C60.0493 (3)0.6856 (3)0.2619 (4)0.0463 (7)
C40.2469 (3)0.7332 (3)0.4470 (4)0.0479 (8)
H4A0.23860.82050.41040.057*
N10.3573 (2)0.5717 (3)0.6122 (3)0.0541 (8)
H1A0.42180.54920.68130.065*
C30.1569 (2)0.6406 (3)0.3883 (3)0.0399 (7)
O40.4364 (2)0.2906 (2)0.1204 (3)0.0707 (8)
O30.3944 (2)0.4992 (2)0.2176 (3)0.0653 (7)
C20.1692 (3)0.5117 (3)0.4485 (4)0.0457 (8)
H2C0.10960.44790.41170.055*
C50.3479 (3)0.6961 (4)0.5590 (4)0.0549 (9)
H5A0.40940.75750.59730.066*
O20.3407 (3)0.4505 (3)−0.0636 (3)0.0843 (9)
O10.2315 (2)0.3517 (3)0.1231 (4)0.0759 (8)
C10.2713 (3)0.4798 (3)0.5636 (4)0.0536 (9)
H1B0.28030.39450.60720.064*
U11U22U33U12U13U23
Cl10.0405 (5)0.0430 (5)0.0519 (5)0.0012 (3)−0.0116 (3)0.0000 (3)
O50.0581 (15)0.0403 (14)0.0867 (19)0.0094 (11)−0.0176 (12)0.0095 (12)
N20.0575 (19)0.0488 (18)0.087 (2)−0.0020 (13)−0.0377 (17)0.0116 (15)
C60.0397 (17)0.0405 (18)0.0548 (19)0.0032 (13)−0.0039 (13)0.0050 (14)
C40.0466 (18)0.0361 (16)0.057 (2)−0.0056 (13)−0.0036 (14)0.0033 (13)
N10.0460 (16)0.0565 (18)0.0509 (17)0.0061 (12)−0.0187 (13)−0.0010 (12)
C30.0346 (16)0.0371 (15)0.0448 (17)0.0021 (11)−0.0030 (12)−0.0012 (12)
O40.0550 (15)0.0510 (15)0.097 (2)0.0147 (11)−0.0145 (14)−0.0040 (13)
O30.0595 (16)0.0570 (15)0.0721 (17)−0.0015 (11)−0.0110 (12)−0.0208 (12)
C20.0469 (18)0.0319 (15)0.0520 (19)−0.0018 (12)−0.0109 (14)−0.0034 (12)
C50.0438 (19)0.055 (2)0.060 (2)−0.0120 (15)−0.0079 (15)−0.0007 (16)
O20.106 (2)0.087 (2)0.0518 (17)−0.0028 (17)−0.0107 (15)0.0126 (14)
O10.0434 (15)0.0839 (19)0.096 (2)−0.0120 (13)−0.0021 (13)−0.0088 (16)
C10.060 (2)0.0381 (17)0.055 (2)0.0063 (15)−0.0145 (16)−0.0002 (14)
Cl1—O41.421 (2)C4—C31.385 (4)
Cl1—O21.424 (3)C4—H4A0.9300
Cl1—O11.425 (3)N1—C51.327 (4)
Cl1—O31.441 (2)N1—C11.334 (4)
O5—C61.231 (3)N1—H1A0.8600
N2—C61.310 (4)C3—C21.389 (4)
N2—H2A0.8600C2—C11.377 (4)
N2—H2B0.8600C2—H2C0.9300
C6—C31.507 (4)C5—H5A0.9300
C4—C51.369 (5)C1—H1B0.9300
O4—Cl1—O2110.33 (19)C5—N1—C1123.0 (3)
O4—Cl1—O1109.76 (17)C5—N1—H1A118.5
O2—Cl1—O1108.68 (18)C1—N1—H1A118.5
O4—Cl1—O3108.36 (15)C4—C3—C2119.0 (3)
O2—Cl1—O3109.30 (18)C4—C3—C6117.9 (3)
O1—Cl1—O3110.41 (17)C2—C3—C6123.1 (3)
C6—N2—H2A120.0C1—C2—C3118.9 (3)
C6—N2—H2B120.0C1—C2—H2C120.6
H2A—N2—H2B120.0C3—C2—H2C120.6
O5—C6—N2123.2 (3)N1—C5—C4119.3 (3)
O5—C6—C3118.9 (3)N1—C5—H5A120.3
N2—C6—C3117.8 (3)C4—C5—H5A120.3
C5—C4—C3120.0 (3)N1—C1—C2119.7 (3)
C5—C4—H4A120.0N1—C1—H1B120.1
C3—C4—H4A120.0C2—C1—H1B120.1
C5—C4—C3—C21.9 (5)C4—C3—C2—C1−0.6 (5)
C5—C4—C3—C6−178.4 (3)C6—C3—C2—C1179.7 (3)
O5—C6—C3—C4−9.0 (5)C1—N1—C5—C4−1.0 (5)
N2—C6—C3—C4169.5 (3)C3—C4—C5—N1−1.2 (5)
O5—C6—C3—C2170.7 (3)C5—N1—C1—C22.4 (5)
N2—C6—C3—C2−10.9 (5)C3—C2—C1—N1−1.5 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O3i0.862.102.932 (4)162
N2—H2A···O1ii0.862.323.162 (4)168
N2—H2B···O5iii0.862.173.004 (4)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O3i0.862.102.932 (4)162
N2—H2A⋯O1ii0.862.323.162 (4)168
N2—H2B⋯O5iii0.862.173.004 (4)164

Symmetry codes: (i) ; (ii) ; (iii) .

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