Literature DB >> 21578231

(E)-N'-(2,5-Dimethoxy-benzyl-idene)-3,4-dihydroxy-benzohydrazide monohydrate.

Bin Xu, Ling Han, Qi-Hui Zhang.   

Abstract

In the title compound, C(16)H(16)N(2)O(5)·H(2)O, the dihedral angle between the two benzene rings is 25.9 (1)°. Intra-molecular O-H⋯O and N-H⋯O hydrogen bonds are observed. In the crystal, the components are linked into a three-dimensional network by O-H⋯O and O-H⋯(O,O) hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578231      PMCID: PMC2970986          DOI: 10.1107/S1600536809039300

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Pu (2008 ▶); Wang et al. (2009 ▶). For reference structural data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C16H16N2O5·H2O M = 334.32 Monoclinic, a = 10.2573 (8) Å b = 12.4199 (10) Å c = 14.0042 (8) Å β = 119.666 (4)° V = 1550.2 (2) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 295 K 0.20 × 0.18 × 0.17 mm

Data collection

Siemens SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Siemens, 1996 ▶) T min = 0.978, T max = 0.981 7993 measured reflections 2735 independent reflections 2110 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.098 S = 1.02 2735 reflections 220 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.15 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809039300/hb5111sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039300/hb5111Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O5·H2OF(000) = 704
Mr = 334.32Dx = 1.432 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2817 reflections
a = 10.2573 (8) Åθ = 2.3–28.0°
b = 12.4199 (10) ŵ = 0.11 mm1
c = 14.0042 (8) ÅT = 295 K
β = 119.666 (4)°Block, light yellow
V = 1550.2 (2) Å30.20 × 0.18 × 0.17 mm
Z = 4
Siemens SMART CCD diffractometer2735 independent reflections
Radiation source: fine-focus sealed tube2110 reflections with I > 2σ(I)
graphiteRint = 0.060
ω scansθmax = 25.1°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Siemens, 1996)h = −12→10
Tmin = 0.978, Tmax = 0.981k = −14→14
7993 measured reflectionsl = −16→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.098w = 1/[σ2(Fo2) + (0.0472P)2 + 0.0836P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2735 reflectionsΔρmax = 0.30 e Å3
220 parametersΔρmin = −0.15 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0092 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.29807 (12)0.63600 (8)0.00386 (8)0.0415 (3)
H10.34780.67630.05580.062*
O20.25882 (12)0.49266 (9)−0.15328 (8)0.0451 (3)
H20.24790.5582−0.15610.068*
O30.50018 (13)0.24912 (8)0.30247 (8)0.0462 (3)
O40.83630 (14)0.60874 (9)0.70864 (9)0.0516 (3)
O50.84768 (13)0.17847 (9)0.81326 (9)0.0554 (4)
O60.71520 (13)0.60032 (9)0.33312 (9)0.0469 (3)
H170.73550.57470.28570.070*
H180.65600.65300.30210.070*
N10.56517 (14)0.42030 (10)0.36286 (9)0.0374 (3)
H1A0.56580.48730.34770.045*
N20.62828 (14)0.38569 (10)0.47007 (10)0.0386 (3)
C10.43573 (16)0.38751 (11)0.16836 (11)0.0311 (4)
C20.39529 (16)0.49534 (12)0.14219 (11)0.0324 (4)
H2A0.40680.54310.19700.039*
C30.33846 (15)0.53178 (12)0.03578 (12)0.0306 (3)
C40.31715 (16)0.45885 (12)−0.04685 (11)0.0328 (4)
C50.35509 (17)0.35223 (13)−0.02211 (12)0.0380 (4)
H50.34080.3041−0.07730.046*
C60.41477 (17)0.31659 (12)0.08543 (12)0.0363 (4)
H60.44090.24450.10200.044*
C70.50232 (16)0.34597 (12)0.28220 (12)0.0336 (4)
C80.69125 (17)0.45828 (13)0.54315 (12)0.0378 (4)
H80.68790.53000.52300.045*
C90.76899 (16)0.42735 (13)0.65942 (11)0.0346 (4)
C100.84706 (17)0.50414 (13)0.74194 (12)0.0364 (4)
C110.92900 (17)0.46990 (14)0.84979 (12)0.0410 (4)
H110.98250.52000.90490.049*
C120.93298 (18)0.36251 (14)0.87737 (12)0.0429 (4)
H120.98990.34100.95030.051*
C130.85242 (18)0.28700 (13)0.79661 (12)0.0396 (4)
C140.77166 (17)0.32066 (13)0.68859 (12)0.0390 (4)
H140.71760.27020.63400.047*
C150.9048 (2)0.68888 (14)0.79085 (14)0.0512 (5)
H15A0.86010.68840.83700.077*
H15B0.89030.75820.75670.077*
H15C1.01020.67430.83440.077*
C160.9447 (2)0.13853 (17)0.92118 (15)0.0683 (6)
H16A1.04610.15940.94420.102*
H16B0.93820.06140.92100.102*
H16C0.91510.16780.97100.102*
U11U22U33U12U13U23
O10.0508 (7)0.0360 (6)0.0266 (6)0.0042 (5)0.0106 (5)0.0021 (5)
O20.0597 (8)0.0478 (7)0.0227 (6)0.0049 (5)0.0166 (6)0.0044 (5)
O30.0635 (8)0.0327 (6)0.0257 (6)−0.0063 (5)0.0093 (6)0.0017 (5)
O40.0685 (8)0.0415 (7)0.0295 (6)−0.0086 (6)0.0126 (6)−0.0060 (5)
O50.0657 (8)0.0467 (7)0.0324 (7)−0.0016 (6)0.0079 (6)0.0076 (5)
O60.0586 (8)0.0424 (7)0.0345 (6)0.0024 (5)0.0190 (6)0.0026 (5)
N10.0499 (8)0.0325 (7)0.0176 (6)−0.0026 (6)0.0075 (6)0.0025 (5)
N20.0463 (8)0.0408 (8)0.0196 (6)−0.0029 (6)0.0093 (6)0.0009 (6)
C10.0319 (8)0.0328 (8)0.0222 (7)−0.0040 (6)0.0084 (6)−0.0006 (6)
C20.0339 (8)0.0351 (8)0.0226 (8)−0.0032 (6)0.0097 (7)−0.0039 (6)
C30.0280 (8)0.0335 (8)0.0243 (8)0.0000 (6)0.0084 (6)0.0013 (6)
C40.0326 (8)0.0427 (9)0.0200 (8)−0.0026 (7)0.0107 (7)0.0008 (6)
C50.0471 (10)0.0385 (9)0.0254 (8)−0.0036 (7)0.0156 (7)−0.0065 (7)
C60.0429 (9)0.0322 (8)0.0277 (8)−0.0012 (7)0.0128 (7)−0.0007 (7)
C70.0361 (9)0.0337 (9)0.0238 (8)−0.0029 (6)0.0094 (7)−0.0008 (6)
C80.0433 (9)0.0373 (9)0.0265 (8)−0.0001 (7)0.0125 (7)−0.0012 (7)
C90.0335 (9)0.0432 (9)0.0216 (8)0.0009 (6)0.0095 (7)−0.0026 (6)
C100.0388 (9)0.0410 (9)0.0268 (8)−0.0007 (7)0.0143 (7)−0.0034 (7)
C110.0438 (10)0.0484 (10)0.0233 (8)−0.0048 (7)0.0109 (7)−0.0091 (7)
C120.0454 (10)0.0542 (11)0.0204 (8)0.0024 (8)0.0097 (7)0.0005 (7)
C130.0425 (10)0.0427 (10)0.0278 (8)0.0002 (7)0.0130 (7)0.0009 (7)
C140.0413 (9)0.0433 (10)0.0240 (8)−0.0017 (7)0.0098 (7)−0.0041 (7)
C150.0569 (11)0.0437 (10)0.0422 (10)−0.0060 (8)0.0162 (9)−0.0106 (8)
C160.0812 (15)0.0597 (13)0.0383 (11)0.0024 (10)0.0099 (10)0.0188 (9)
O1—C31.3652 (17)C4—C51.375 (2)
O1—H10.8200C5—C61.388 (2)
O2—C41.3687 (16)C5—H50.9300
O2—H20.8198C6—H60.9300
O3—C71.2386 (17)C8—C91.466 (2)
O4—C101.3662 (19)C8—H80.9300
O4—C151.4173 (19)C9—C141.383 (2)
O5—C131.3729 (19)C9—C101.404 (2)
O5—C161.4254 (19)C10—C111.383 (2)
O6—H170.8500C11—C121.384 (2)
O6—H180.8508C11—H110.9300
N1—C71.3501 (18)C12—C131.384 (2)
N1—N21.3770 (17)C12—H120.9300
N1—H1A0.8595C13—C141.382 (2)
N2—C81.2740 (19)C14—H140.9300
C1—C61.387 (2)C15—H15A0.9600
C1—C21.396 (2)C15—H15B0.9600
C1—C71.482 (2)C15—H15C0.9600
C2—C31.380 (2)C16—H16A0.9600
C2—H2A0.9300C16—H16B0.9600
C3—C41.399 (2)C16—H16C0.9600
C3—O1—H1109.5C9—C8—H8120.4
C4—O2—H2109.4C14—C9—C10119.21 (14)
C10—O4—C15117.82 (12)C14—C9—C8119.97 (14)
C13—O5—C16117.19 (13)C10—C9—C8120.76 (14)
H17—O6—H18106.2O4—C10—C11124.61 (14)
C7—N1—N2118.09 (12)O4—C10—C9116.64 (13)
C7—N1—H1A120.9C11—C10—C9118.75 (15)
N2—N1—H1A121.0C10—C11—C12121.29 (15)
C8—N2—N1115.64 (13)C10—C11—H11119.4
C6—C1—C2119.12 (13)C12—C11—H11119.4
C6—C1—C7118.53 (13)C11—C12—C13120.12 (14)
C2—C1—C7122.35 (13)C11—C12—H12119.9
C3—C2—C1120.64 (13)C13—C12—H12119.9
C3—C2—H2A119.7O5—C13—C14115.51 (14)
C1—C2—H2A119.7O5—C13—C12125.69 (14)
O1—C3—C2124.19 (13)C14—C13—C12118.78 (15)
O1—C3—C4116.44 (13)C13—C14—C9121.79 (15)
C2—C3—C4119.36 (13)C13—C14—H14119.1
O2—C4—C5119.11 (13)C9—C14—H14119.1
O2—C4—C3120.48 (13)O4—C15—H15A109.5
C5—C4—C3120.41 (13)O4—C15—H15B109.5
C4—C5—C6119.89 (14)H15A—C15—H15B109.5
C4—C5—H5120.1O4—C15—H15C109.5
C6—C5—H5120.1H15A—C15—H15C109.5
C1—C6—C5120.56 (14)H15B—C15—H15C109.5
C1—C6—H6119.7O5—C16—H16A109.5
C5—C6—H6119.7O5—C16—H16B109.5
O3—C7—N1121.84 (13)H16A—C16—H16B109.5
O3—C7—C1122.25 (13)O5—C16—H16C109.5
N1—C7—C1115.91 (12)H16A—C16—H16C109.5
N2—C8—C9119.18 (14)H16B—C16—H16C109.5
N2—C8—H8120.4
C7—N1—N2—C8177.35 (14)N1—N2—C8—C9−176.41 (13)
C6—C1—C2—C3−1.5 (2)N2—C8—C9—C14−0.8 (2)
C7—C1—C2—C3177.70 (13)N2—C8—C9—C10176.25 (15)
C1—C2—C3—O1−179.19 (13)C15—O4—C10—C11−4.8 (2)
C1—C2—C3—C42.0 (2)C15—O4—C10—C9175.43 (14)
O1—C3—C4—O20.1 (2)C14—C9—C10—O4−177.86 (14)
C2—C3—C4—O2179.00 (13)C8—C9—C10—O45.1 (2)
O1—C3—C4—C5179.83 (13)C14—C9—C10—C112.4 (2)
C2—C3—C4—C5−1.2 (2)C8—C9—C10—C11−174.70 (14)
O2—C4—C5—C6179.82 (14)O4—C10—C11—C12179.15 (15)
C3—C4—C5—C60.1 (2)C9—C10—C11—C12−1.1 (2)
C2—C1—C6—C50.3 (2)C10—C11—C12—C13−0.9 (2)
C7—C1—C6—C5−178.94 (14)C16—O5—C13—C14172.04 (16)
C4—C5—C6—C10.4 (2)C16—O5—C13—C12−6.2 (3)
N2—N1—C7—O30.1 (2)C11—C12—C13—O5179.70 (15)
N2—N1—C7—C1179.86 (13)C11—C12—C13—C141.5 (2)
C6—C1—C7—O3−21.2 (2)O5—C13—C14—C9−178.57 (14)
C2—C1—C7—O3159.56 (15)C12—C13—C14—C9−0.2 (2)
C6—C1—C7—N1159.05 (14)C10—C9—C14—C13−1.8 (2)
C2—C1—C7—N1−20.2 (2)C8—C9—C14—C13175.35 (14)
D—H···AD—HH···AD···AD—H···A
O1—H1···O3i0.822.032.8384 (15)168
O2—H2···O10.822.252.7014 (15)115
O2—H2···O5i0.822.433.0191 (15)130
O6—H17···O2ii0.852.062.9003 (15)169
O6—H18···O3i0.851.952.7837 (15)165
N1—H1A···O60.862.162.8592 (17)138
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O3i0.822.032.8384 (15)168
O2—H2⋯O10.822.252.7014 (15)115
O2—H2⋯O5i0.822.433.0191 (15)130
O6—H17⋯O2ii0.852.062.9003 (15)169
O6—H18⋯O3i0.851.952.7837 (15)165
N1—H1A⋯O60.862.162.8592 (17)138

Symmetry codes: (i) ; (ii) .

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