Literature DB >> 21578201

Bis{(1-methyl-imidazol-2-ylmeth-yl)[2-(2-pyridyl)eth-yl]amine-κN,N',N''}zinc(II) bis-(hexa-fluoridophosphate).

Ai-Zhi Wu, Seik Weng Ng.   

Abstract

Two tridentate N-heterocyclic ligands chelate the Zn(II) atom in the title compound, [Zn(C(12)H(16)N(4))(2)](PF(6))(2), conferring a fac-octa-hedral geometry. The Zn(II) atom lies on a center of inversion. The cation is linked to the anion by an N-H⋯F hydrogen bond.

Entities:  

Year:  2009        PMID: 21578201      PMCID: PMC2971120          DOI: 10.1107/S1600536809044419

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

No crystal structure studies of metal complexes with the N-heterocyclic ligand have been reported. For the synthesis of the ligand, see: Greatti et al. (2008 ▶).

Experimental

Crystal data

[Zn(C12H16N4)2](PF6)2 M = 787.89 Orthorhombic, a = 13.3147 (5) Å b = 11.8147 (4) Å c = 20.3359 (6) Å V = 3199.0 (2) Å3 Z = 4 Mo Kα radiation μ = 0.97 mm−1 T = 100 K 0.40 × 0.38 × 0.35 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.698, T max = 0.728 18287 measured reflections 3655 independent reflections 2740 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.147 S = 1.04 3655 reflections 219 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.49 e Å−3 Δρmin = −0.71 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809044419/xu2647sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809044419/xu2647Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C12H16N4)2](PF6)2F(000) = 1600
Mr = 787.89Dx = 1.636 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4790 reflections
a = 13.3147 (5) Åθ = 2.5–28.2°
b = 11.8147 (4) ŵ = 0.97 mm1
c = 20.3359 (6) ÅT = 100 K
V = 3199.0 (2) Å3Block, colorless
Z = 40.40 × 0.38 × 0.35 mm
Bruker APEXII diffractometer3655 independent reflections
Radiation source: fine-focus sealed tube2740 reflections with I > 2σ(I)
graphiteRint = 0.048
ω scansθmax = 27.5°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→17
Tmin = 0.698, Tmax = 0.728k = −13→15
18287 measured reflectionsl = −22→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.147H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0755P)2 + 5.7073P] where P = (Fo2 + 2Fc2)/3
3655 reflections(Δ/σ)max = 0.001
219 parametersΔρmax = 1.49 e Å3
1 restraintΔρmin = −0.71 e Å3
xyzUiso*/Ueq
Zn10.50000.50000.50000.02098 (16)
P10.38657 (6)0.83958 (7)0.68434 (4)0.0251 (2)
F10.47058 (17)0.7507 (2)0.66130 (14)0.0524 (7)
F20.47025 (19)0.9039 (2)0.72513 (13)0.0563 (7)
F30.30477 (18)0.9306 (2)0.70513 (12)0.0540 (7)
F40.30581 (18)0.7775 (2)0.63902 (15)0.0586 (7)
F50.3608 (2)0.7641 (3)0.74431 (16)0.0840 (11)
F60.4135 (2)0.9157 (2)0.62167 (13)0.0588 (7)
N10.40722 (19)0.5353 (2)0.58640 (13)0.0231 (6)
H10.424 (3)0.5969 (18)0.6075 (15)0.027 (9)*
N20.48361 (19)0.3368 (2)0.53888 (14)0.0248 (6)
N30.4460 (2)0.2326 (2)0.62505 (14)0.0282 (6)
N40.3548 (2)0.4794 (2)0.44007 (14)0.0267 (6)
C10.4281 (3)0.4463 (3)0.63589 (16)0.0274 (7)
H1A0.36900.43580.66480.033*
H1B0.48610.46850.66350.033*
C20.4510 (2)0.3384 (3)0.60004 (16)0.0243 (7)
C30.4784 (3)0.1600 (3)0.57608 (19)0.0326 (8)
H30.48380.08000.57900.039*
C40.5009 (2)0.2245 (3)0.5236 (2)0.0294 (7)
H40.52480.19720.48250.035*
C50.4136 (3)0.1995 (3)0.69075 (18)0.0372 (9)
H5A0.39150.26670.71500.056*
H5B0.46970.16380.71410.056*
H5C0.35780.14570.68740.056*
C60.2980 (2)0.5415 (3)0.57167 (17)0.0254 (7)
H6A0.26210.57150.61060.031*
H6B0.27240.46430.56290.031*
C70.2758 (2)0.6170 (3)0.51236 (17)0.0292 (7)
H7A0.20920.65290.51810.035*
H7B0.32670.67780.50990.035*
C80.2766 (2)0.5506 (3)0.44925 (17)0.0277 (7)
C90.1977 (3)0.5560 (4)0.40485 (19)0.0391 (9)
H90.14480.60870.41160.047*
C100.1957 (3)0.4854 (4)0.3511 (2)0.0498 (11)
H100.14250.48950.32010.060*
C110.2727 (3)0.4086 (4)0.34328 (19)0.0449 (10)
H110.27240.35640.30780.054*
C120.3505 (3)0.4095 (3)0.38849 (17)0.0330 (8)
H120.40400.35730.38250.040*
U11U22U33U12U13U23
Zn10.0169 (3)0.0213 (3)0.0247 (3)−0.00221 (18)0.00329 (19)0.00056 (19)
P10.0221 (4)0.0233 (4)0.0299 (5)0.0017 (3)−0.0017 (3)−0.0007 (3)
F10.0394 (12)0.0431 (13)0.0747 (18)0.0150 (11)−0.0061 (12)−0.0213 (12)
F20.0428 (13)0.0550 (15)0.0710 (18)0.0110 (12)−0.0256 (12)−0.0275 (13)
F30.0449 (13)0.0636 (16)0.0534 (15)0.0283 (12)−0.0118 (11)−0.0196 (12)
F40.0410 (13)0.0396 (13)0.095 (2)−0.0040 (10)−0.0220 (13)−0.0184 (13)
F50.0588 (18)0.106 (3)0.087 (2)0.0105 (17)0.0142 (15)0.069 (2)
F60.0594 (16)0.0596 (16)0.0573 (17)−0.0066 (13)−0.0012 (13)0.0243 (13)
N10.0209 (12)0.0230 (12)0.0253 (15)−0.0035 (10)0.0010 (10)−0.0006 (11)
N20.0218 (13)0.0216 (12)0.0309 (16)−0.0020 (10)0.0017 (11)0.0006 (11)
N30.0248 (13)0.0270 (14)0.0328 (16)−0.0074 (11)−0.0075 (11)0.0064 (12)
N40.0197 (13)0.0328 (14)0.0277 (15)−0.0047 (11)0.0012 (11)0.0005 (11)
C10.0271 (15)0.0277 (16)0.0273 (18)−0.0017 (13)0.0014 (13)0.0013 (13)
C20.0196 (14)0.0218 (15)0.0317 (18)−0.0034 (12)−0.0024 (12)0.0040 (13)
C30.0272 (16)0.0223 (15)0.048 (2)−0.0028 (13)−0.0097 (15)0.0008 (15)
C40.0221 (15)0.0250 (16)0.041 (2)−0.0027 (12)−0.0029 (14)−0.0050 (14)
C50.043 (2)0.0341 (18)0.035 (2)−0.0167 (16)−0.0106 (16)0.0121 (15)
C60.0171 (14)0.0282 (15)0.0310 (18)−0.0024 (12)0.0061 (12)−0.0010 (13)
C70.0164 (14)0.0285 (16)0.043 (2)0.0007 (12)0.0027 (13)0.0011 (14)
C80.0176 (14)0.0335 (17)0.0321 (19)−0.0035 (12)0.0036 (13)0.0048 (14)
C90.0227 (17)0.057 (2)0.037 (2)0.0016 (16)−0.0007 (15)0.0107 (18)
C100.0278 (19)0.087 (3)0.034 (2)−0.006 (2)−0.0050 (16)0.003 (2)
C110.0316 (19)0.076 (3)0.027 (2)−0.012 (2)0.0021 (15)−0.0128 (19)
C120.0235 (16)0.044 (2)0.031 (2)−0.0061 (15)0.0052 (13)−0.0049 (15)
Zn1—N12.188 (3)C1—H1A0.9900
Zn1—N1i2.188 (3)C1—H1B0.9900
Zn1—N2i2.095 (3)C3—C41.345 (5)
Zn1—N22.095 (3)C3—H30.9500
Zn1—N42.298 (3)C4—H40.9500
Zn1—N4i2.298 (3)C5—H5A0.9800
P1—F51.549 (3)C5—H5B0.9800
P1—F21.583 (2)C5—H5C0.9800
P1—F31.588 (2)C6—C71.529 (5)
P1—F41.595 (2)C6—H6A0.9900
P1—F61.601 (3)C6—H6B0.9900
P1—F11.605 (2)C7—C81.504 (5)
N1—C11.482 (4)C7—H7A0.9900
N1—C61.486 (4)C7—H7B0.9900
N1—H10.875 (10)C8—C91.386 (5)
N2—C21.317 (4)C9—C101.375 (6)
N2—C41.382 (4)C9—H90.9500
N3—C21.351 (4)C10—C111.378 (6)
N3—C31.383 (5)C10—H100.9500
N3—C51.457 (4)C11—C121.385 (5)
N4—C121.336 (4)C11—H110.9500
N4—C81.352 (4)C12—H120.9500
C1—C21.500 (4)
N2i—Zn1—N2180.00 (6)C2—C1—H1A110.1
N2i—Zn1—N1100.73 (10)N1—C1—H1B110.1
N2—Zn1—N179.27 (10)C2—C1—H1B110.1
N2i—Zn1—N1i79.27 (10)H1A—C1—H1B108.4
N2—Zn1—N1i100.73 (10)N2—C2—N3111.0 (3)
N1—Zn1—N1i180.0N2—C2—C1122.5 (3)
N2i—Zn1—N489.13 (10)N3—C2—C1126.4 (3)
N2—Zn1—N490.87 (10)C4—C3—N3106.8 (3)
N1—Zn1—N488.35 (10)C4—C3—H3126.6
N1i—Zn1—N491.65 (9)N3—C3—H3126.6
N2i—Zn1—N4i90.87 (10)C3—C4—N2109.2 (3)
N2—Zn1—N4i89.13 (10)C3—C4—H4125.4
N1—Zn1—N4i91.65 (9)N2—C4—H4125.4
N1i—Zn1—N4i88.35 (10)N3—C5—H5A109.5
N4—Zn1—N4i180.0N3—C5—H5B109.5
F5—P1—F291.12 (18)H5A—C5—H5B109.5
F5—P1—F391.64 (17)N3—C5—H5C109.5
F2—P1—F391.04 (13)H5A—C5—H5C109.5
F5—P1—F492.36 (18)H5B—C5—H5C109.5
F2—P1—F4176.28 (17)N1—C6—C7112.2 (2)
F3—P1—F490.16 (13)N1—C6—H6A109.2
F5—P1—F6179.05 (19)C7—C6—H6A109.2
F2—P1—F689.42 (16)N1—C6—H6B109.2
F3—P1—F689.12 (15)C7—C6—H6B109.2
F4—P1—F687.08 (15)H6A—C6—H6B107.9
F5—P1—F190.41 (17)C8—C7—C6111.6 (3)
F2—P1—F188.66 (13)C8—C7—H7A109.3
F3—P1—F1177.93 (16)C6—C7—H7A109.3
F4—P1—F190.02 (13)C8—C7—H7B109.3
F6—P1—F188.83 (15)C6—C7—H7B109.3
C1—N1—C6110.8 (2)H7A—C7—H7B108.0
C1—N1—Zn1107.68 (19)N4—C8—C9121.5 (3)
C6—N1—Zn1113.6 (2)N4—C8—C7116.6 (3)
C1—N1—H1102 (2)C9—C8—C7121.8 (3)
C6—N1—H1108 (2)C10—C9—C8120.3 (4)
Zn1—N1—H1114 (2)C10—C9—H9119.8
C2—N2—C4106.3 (3)C8—C9—H9119.8
C2—N2—Zn1112.2 (2)C9—C10—C11118.5 (4)
C4—N2—Zn1141.4 (2)C9—C10—H10120.8
C2—N3—C3106.7 (3)C11—C10—H10120.8
C2—N3—C5127.4 (3)C10—C11—C12118.3 (4)
C3—N3—C5125.9 (3)C10—C11—H11120.8
C12—N4—C8117.4 (3)C12—C11—H11120.8
C12—N4—Zn1121.2 (2)N4—C12—C11123.9 (4)
C8—N4—Zn1120.6 (2)N4—C12—H12118.0
N1—C1—C2108.1 (3)C11—C12—H12118.0
N1—C1—H1A110.1
N2i—Zn1—N1—C1−152.89 (19)Zn1—N2—C2—C10.5 (4)
N2—Zn1—N1—C127.11 (19)C3—N3—C2—N20.4 (4)
N4—Zn1—N1—C1118.3 (2)C5—N3—C2—N2−180.0 (3)
N4i—Zn1—N1—C1−61.7 (2)C3—N3—C2—C1−176.9 (3)
N2i—Zn1—N1—C684.0 (2)C5—N3—C2—C12.7 (5)
N2—Zn1—N1—C6−96.0 (2)N1—C1—C2—N223.2 (4)
N4—Zn1—N1—C6−4.8 (2)N1—C1—C2—N3−159.8 (3)
N4i—Zn1—N1—C6175.2 (2)C2—N3—C3—C4−0.4 (4)
N1—Zn1—N2—C2−15.5 (2)C5—N3—C3—C4179.9 (3)
N1i—Zn1—N2—C2164.5 (2)N3—C3—C4—N20.3 (4)
N4—Zn1—N2—C2−103.7 (2)C2—N2—C4—C3−0.1 (4)
N4i—Zn1—N2—C276.3 (2)Zn1—N2—C4—C3175.0 (3)
N1—Zn1—N2—C4169.6 (4)C1—N1—C6—C7−169.8 (3)
N1i—Zn1—N2—C4−10.4 (4)Zn1—N1—C6—C7−48.4 (3)
N4—Zn1—N2—C481.4 (4)N1—C6—C7—C890.1 (3)
N4i—Zn1—N2—C4−98.6 (4)C12—N4—C8—C9−3.8 (5)
N2i—Zn1—N4—C12109.5 (3)Zn1—N4—C8—C9165.9 (3)
N2—Zn1—N4—C12−70.5 (3)C12—N4—C8—C7171.8 (3)
N1—Zn1—N4—C12−149.8 (3)Zn1—N4—C8—C7−18.5 (4)
N1i—Zn1—N4—C1230.2 (3)C6—C7—C8—N4−47.0 (4)
N2i—Zn1—N4—C8−59.9 (2)C6—C7—C8—C9128.7 (3)
N2—Zn1—N4—C8120.1 (2)N4—C8—C9—C102.3 (6)
N1—Zn1—N4—C840.9 (2)C7—C8—C9—C10−173.1 (3)
N1i—Zn1—N4—C8−139.1 (2)C8—C9—C10—C111.0 (6)
C6—N1—C1—C292.0 (3)C9—C10—C11—C12−2.6 (6)
Zn1—N1—C1—C2−32.7 (3)C8—N4—C12—C112.2 (5)
C4—N2—C2—N3−0.2 (3)Zn1—N4—C12—C11−167.5 (3)
Zn1—N2—C2—N3−176.9 (2)C10—C11—C12—N41.1 (6)
C4—N2—C2—C1177.2 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···F10.88 (1)2.21 (1)3.083 (4)179 (3)
Table 1

Selected bond lengths (Å)

Zn1—N12.188 (3)
Zn1—N22.095 (3)
Zn1—N42.298 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯F10.88 (1)2.21 (1)3.083 (4)179 (3)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Alessandra Greatti; Marciela Scarpellini; Rosely A Peralta; Annelise Casellato; Adailton J Bortoluzzi; Fernanado R Xavier; Rafael Jovito; Marcos Aires de Brito; Bruno Szpoganicz; Zbigniew Tomkowicz; Michal Rams; Wolfgang Haase; Ademir Neves
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