Literature DB >> 21578193

Bis(hexa-methyl-enetetra-mine)bis-(tri-chloro-acetato)copper(II).

Li-Min Li, Fang-Fang Jian, Yu-Feng Li.   

Abstract

In the title compound, [Cu(C(2)Cl(3)O(2))(2)(C(6)H(12)N(4))(2)], the Cu(II) ion (site symmetry 2) is coordinated by two trichloro-acetate anions and two hexa-methyl-enetetra-mine mol-ecules, resulting in a distorted CuN(2)O(2) geometry that is inter-mediate between tetra-hedral and square planar. The Cl atoms are disordered over two sets of sites, with relative occupancies of 0.749 (7) and 0.251 (7). In the crystal, the packing is consolidated by inter-molecular C-H⋯O inter-actions.

Entities:  

Year:  2009        PMID: 21578193      PMCID: PMC2971390          DOI: 10.1107/S1600536809043736

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to coordination networks, see: Chen et al. (2001 ▶). For a related structure, see: Moncol et al. (2007 ▶).

Experimental

Crystal data

[Cu(C2Cl3O2)2(C6H12N4)2] M = 668.67 Monoclinic, a = 23.291 (5) Å b = 6.4759 (13) Å c = 20.702 (4) Å β = 121.36 (3)° V = 2666.3 (9) Å3 Z = 4 Mo Kα radiation μ = 1.46 mm−1 T = 293 K 0.30 × 0.20 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: none 12444 measured reflections 3048 independent reflections 2740 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.184 S = 1.09 3048 reflections 187 parameters 78 restraints H-atom parameters constrained Δρmax = 1.52 e Å−3 Δρmin = −0.98 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809043736/hb5145sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809043736/hb5145Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C2Cl3O2)2(C6H12N4)2]F(000) = 1356
Mr = 668.67Dx = 1.666 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 23.291 (5) ÅCell parameters from 2740 reflections
b = 6.4759 (13) Åθ = 3.3–27.5°
c = 20.702 (4) ŵ = 1.46 mm1
β = 121.36 (3)°T = 293 K
V = 2666.3 (9) Å3Block, green
Z = 40.30 × 0.20 × 0.15 mm
Bruker SMART CCD diffractometer2740 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.023
graphiteθmax = 27.5°, θmin = 3.3°
Detector resolution: 3 pixels mm-1h = −30→30
ω scansk = −7→8
12444 measured reflectionsl = −26→26
3048 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.184H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.1275P)2 + 3.9764P] where P = (Fo2 + 2Fc2)/3
3048 reflections(Δ/σ)max = 0.042
187 parametersΔρmax = 1.52 e Å3
78 restraintsΔρmin = −0.98 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cu10.00000.79415 (8)0.25000.0315 (2)
O10.06660 (12)0.7420 (4)0.35558 (14)0.0428 (6)
O20.01619 (16)0.4397 (5)0.33908 (17)0.0669 (9)
N10.07476 (12)0.8907 (4)0.23307 (14)0.0303 (5)
N20.15738 (18)1.1697 (5)0.2701 (2)0.0483 (7)
N30.10588 (16)1.0194 (5)0.14402 (17)0.0445 (7)
N40.18698 (16)0.8189 (5)0.2547 (2)0.0477 (8)
C10.10233 (18)1.0882 (5)0.27694 (19)0.0396 (7)
H1A0.06671.19000.25840.047*
H1B0.11831.06290.32990.047*
C20.1318 (2)1.2073 (6)0.1894 (3)0.0499 (9)
H2A0.09621.30960.17040.060*
H2B0.16781.26290.18400.060*
C30.1605 (2)0.8664 (7)0.1743 (2)0.0519 (9)
H3A0.19670.91860.16870.062*
H3B0.14390.74020.14490.062*
C40.13189 (18)0.7387 (5)0.2620 (2)0.0406 (7)
H4A0.14850.70850.31470.049*
H4B0.11560.61080.23370.049*
C50.21037 (19)1.0132 (7)0.2968 (2)0.0547 (10)
H5A0.22770.98610.35000.066*
H5B0.24701.06700.29240.066*
C60.05198 (17)0.9380 (6)0.15232 (18)0.0410 (7)
H6A0.03460.81290.12250.049*
H6B0.01571.03790.13280.049*
C70.1155 (2)0.5072 (6)0.45812 (19)0.0579 (10)
C80.05989 (16)0.5630 (6)0.37587 (17)0.0378 (7)
Cl10.1084 (2)0.6786 (5)0.51998 (15)0.0872 (9)0.749 (7)
Cl20.1139 (3)0.2478 (4)0.48019 (19)0.1149 (15)0.749 (7)
Cl30.19694 (13)0.5452 (9)0.47005 (18)0.1191 (16)0.749 (7)
Cl1'0.1398 (7)0.7198 (12)0.5194 (5)0.102 (2)0.251 (7)
Cl2'0.0839 (6)0.2990 (15)0.4873 (5)0.106 (2)0.251 (7)
Cl3'0.1851 (4)0.430 (2)0.4518 (6)0.133 (3)0.251 (7)
U11U22U33U12U13U23
Cu10.0256 (3)0.0403 (4)0.0277 (3)0.0000.0133 (2)0.000
O10.0349 (12)0.0555 (14)0.0316 (12)−0.0009 (10)0.0129 (10)0.0104 (10)
O20.0620 (18)0.0575 (17)0.0507 (16)−0.0134 (14)0.0079 (14)0.0011 (14)
N10.0288 (11)0.0309 (12)0.0326 (12)0.0013 (9)0.0170 (10)0.0000 (10)
N20.0535 (19)0.0428 (15)0.0538 (18)−0.0155 (14)0.0316 (16)−0.0081 (14)
N30.0491 (17)0.0516 (17)0.0424 (15)−0.0001 (13)0.0304 (13)0.0039 (13)
N40.0360 (15)0.0541 (18)0.061 (2)0.0086 (12)0.0305 (15)0.0094 (15)
C10.0476 (18)0.0345 (15)0.0432 (17)−0.0034 (13)0.0282 (15)−0.0068 (14)
C20.059 (2)0.0409 (19)0.058 (2)−0.0043 (15)0.037 (2)0.0067 (16)
C30.059 (2)0.056 (2)0.061 (2)0.0055 (19)0.046 (2)0.0001 (19)
C40.0395 (17)0.0361 (15)0.054 (2)0.0087 (13)0.0295 (16)0.0081 (15)
C50.0361 (18)0.071 (3)0.053 (2)−0.0117 (17)0.0208 (16)0.0022 (19)
C60.0376 (16)0.0516 (19)0.0336 (15)−0.0027 (14)0.0185 (13)−0.0008 (14)
C70.064 (2)0.058 (2)0.0289 (16)0.0017 (19)0.0086 (16)0.0075 (16)
C80.0346 (15)0.0496 (18)0.0253 (13)0.0018 (13)0.0129 (12)0.0010 (13)
Cl10.115 (2)0.0970 (16)0.0377 (8)0.0104 (14)0.0319 (13)−0.0064 (9)
Cl20.147 (3)0.0608 (12)0.0681 (13)0.0104 (14)0.0082 (17)0.0246 (11)
Cl30.0462 (11)0.208 (5)0.0721 (16)0.0175 (17)0.0089 (11)0.030 (2)
Cl1'0.131 (5)0.090 (3)0.036 (2)0.008 (3)0.010 (3)−0.011 (2)
Cl2'0.148 (5)0.064 (3)0.063 (3)−0.009 (3)0.024 (3)0.026 (3)
Cl3'0.053 (3)0.196 (6)0.092 (4)0.044 (4)−0.001 (3)0.005 (4)
Cu1—O11.941 (3)C1—H1B0.9700
Cu1—O1i1.941 (3)C2—H2A0.9700
Cu1—N1i2.045 (2)C2—H2B0.9700
Cu1—N12.045 (2)C3—H3A0.9700
O1—C81.270 (4)C3—H3B0.9700
O2—C81.203 (5)C4—H4A0.9700
N1—C61.499 (4)C4—H4B0.9700
N1—C41.506 (4)C5—H5A0.9700
N1—C11.505 (4)C5—H5B0.9700
N2—C11.460 (5)C6—H6A0.9700
N2—C51.465 (6)C6—H6B0.9700
N2—C21.473 (6)C7—C81.553 (5)
N3—C61.452 (4)C7—Cl21.747 (5)
N3—C21.462 (5)C7—Cl1'1.754 (7)
N3—C31.470 (5)C7—Cl3'1.764 (7)
N4—C41.463 (5)C7—Cl11.766 (5)
N4—C51.465 (6)C7—Cl2'1.786 (7)
N4—C31.477 (5)C7—Cl31.797 (5)
C1—H1A0.9700
O1—Cu1—O1i159.95 (17)N4—C4—H4A109.3
O1—Cu1—N1i96.49 (11)N1—C4—H4A109.3
O1i—Cu1—N1i89.63 (10)N4—C4—H4B109.3
O1—Cu1—N189.63 (10)N1—C4—H4B109.3
O1i—Cu1—N196.49 (11)H4A—C4—H4B108.0
N1i—Cu1—N1144.38 (14)N2—C5—N4112.9 (3)
C8—O1—Cu1111.6 (2)N2—C5—H5A109.0
C6—N1—C4107.7 (2)N4—C5—H5A109.0
C6—N1—C1107.0 (3)N2—C5—H5B109.0
C4—N1—C1107.7 (3)N4—C5—H5B109.0
C6—N1—Cu1114.51 (19)H5A—C5—H5B107.8
C4—N1—Cu1112.75 (19)N3—C6—N1112.3 (3)
C1—N1—Cu1106.88 (18)N3—C6—H6A109.1
C1—N2—C5108.8 (3)N1—C6—H6A109.1
C1—N2—C2108.3 (3)N3—C6—H6B109.1
C5—N2—C2107.9 (3)N1—C6—H6B109.1
C6—N3—C2108.7 (3)H6A—C6—H6B107.9
C6—N3—C3108.3 (3)C8—C7—Cl2113.0 (3)
C2—N3—C3108.1 (3)C8—C7—Cl1'112.4 (4)
C4—N4—C5108.6 (3)Cl2—C7—Cl1'127.5 (4)
C4—N4—C3108.4 (3)C8—C7—Cl3'105.0 (4)
C5—N4—C3107.5 (3)Cl2—C7—Cl3'83.9 (5)
N2—C1—N1111.6 (3)Cl1'—C7—Cl3'108.3 (5)
N2—C1—H1A109.3C8—C7—Cl1108.0 (3)
N1—C1—H1A109.3Cl2—C7—Cl1113.0 (3)
N2—C1—H1B109.3Cl1'—C7—Cl125.7 (4)
N1—C1—H1B109.3Cl3'—C7—Cl1131.9 (4)
H1A—C1—H1B108.0C8—C7—Cl2'106.9 (4)
N3—C2—N2112.3 (3)Cl2—C7—Cl2'27.9 (4)
N3—C2—H2A109.2Cl1'—C7—Cl2'112.5 (5)
N2—C2—H2A109.2Cl3'—C7—Cl2'111.6 (5)
N3—C2—H2B109.2Cl1—C7—Cl2'91.0 (4)
N2—C2—H2B109.2C8—C7—Cl3109.7 (3)
H2A—C2—H2B107.9Cl2—C7—Cl3105.1 (3)
N3—C3—N4112.4 (3)Cl1'—C7—Cl382.7 (5)
N3—C3—H3A109.1Cl3'—C7—Cl326.5 (4)
N4—C3—H3A109.1Cl1—C7—Cl3107.8 (3)
N3—C3—H3B109.1Cl2'—C7—Cl3130.4 (5)
N4—C3—H3B109.1O2—C8—O1127.3 (3)
H3A—C3—H3B107.8O2—C8—C7119.2 (3)
N4—C4—N1111.6 (3)O1—C8—C7113.5 (3)
D—H···AD—HH···AD···AD—H···A
C1—H1A···O2ii0.972.523.416 (5)153
Cu1—O11.941 (3)
Cu1—N12.045 (2)
O1—Cu1—O1i159.95 (17)
O1—Cu1—N189.63 (10)
O1i—Cu1—N196.49 (11)
N1i—Cu1—N1144.38 (14)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1A⋯O2ii0.972.523.416 (5)153

Symmetry code: (ii) .

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