| Literature DB >> 21578175 |
Erick Berdugo, Edward R T Tiekink.
Abstract
The Ni atom in the title linear supra-molecular polymer, [Ni(C(6)H(14)O(2)PS(2))(2)(C(12)H(10)N(4))](n), exists within a trans-N(2)S(4) octa-hedral donor set defined by two symmetrically coordinating dithio-phosphate ligands and pyridine N atoms derived from two bridging bis-(4-pyridylmethyl-ene)diazane ligands. The Ni atom lies on a centre of inversion and the bis-(4-pyridylmethyl-ene)diazane ligand is also disposed about a centre of inversion. The chains are arranged into layers sustained by C-H⋯S contacts and inter-digitate with neighbouring layers, forming the crystal structure.Entities:
Year: 2009 PMID: 21578175 PMCID: PMC2971175 DOI: 10.1107/S1600536809043505
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C6H14O2PS2)2(C12H10N4)] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2817 reflections | |
| θ = 3.0–32.3° | |
| µ = 0.96 mm−1 | |
| α = 88.110 (8)° | |
| β = 81.502 (7)° | Prism, brown-orange |
| γ = 89.813 (10)° | 0.50 × 0.08 × 0.05 mm |
| Rigaku AFC12K/SATURN724 diffractometer | 3810 independent reflections |
| Radiation source: fine-focus sealed tube | 3555 reflections with |
| graphite | |
| ω scans | θmax = 27.5°, θmin = 2.8° |
| Absorption correction: multi-scan ( | |
| 7552 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3810 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.63 e Å−3 |
| 0 restraints | Δρmin = −0.70 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni | 0.5000 | 0.5000 | 0.5000 | 0.01506 (12) | |
| S1 | 0.73976 (6) | 0.43573 (6) | 0.58844 (5) | 0.01900 (14) | |
| S2 | 0.46123 (7) | 0.68201 (6) | 0.66788 (5) | 0.01887 (14) | |
| P1 | 0.64607 (7) | 0.57524 (7) | 0.71650 (5) | 0.01822 (15) | |
| O1 | 0.5953 (2) | 0.48949 (19) | 0.84272 (15) | 0.0223 (4) | |
| O2 | 0.7711 (2) | 0.6930 (2) | 0.75100 (15) | 0.0241 (4) | |
| N1 | 0.3710 (2) | 0.3357 (2) | 0.61516 (17) | 0.0177 (4) | |
| N2 | 0.0259 (2) | 0.0611 (2) | 0.95949 (18) | 0.0230 (4) | |
| C1 | 0.6944 (3) | 0.3733 (3) | 0.8926 (2) | 0.0261 (5) | |
| H1 | 0.7730 | 0.3345 | 0.8257 | 0.031* | |
| C2 | 0.5865 (3) | 0.2446 (3) | 0.9442 (2) | 0.0315 (6) | |
| H2A | 0.5378 | 0.2009 | 0.8792 | 0.047* | |
| H2B | 0.5053 | 0.2840 | 1.0061 | 0.047* | |
| H2C | 0.6464 | 0.1653 | 0.9810 | 0.047* | |
| C3 | 0.7778 (3) | 0.4463 (3) | 0.9858 (2) | 0.0305 (6) | |
| H3A | 0.8473 | 0.5272 | 0.9464 | 0.046* | |
| H3B | 0.8393 | 0.3688 | 1.0230 | 0.046* | |
| H3C | 0.7009 | 0.4903 | 1.0486 | 0.046* | |
| C4 | 0.8388 (3) | 0.8094 (3) | 0.6614 (2) | 0.0266 (5) | |
| H4 | 0.7952 | 0.7981 | 0.5840 | 0.032* | |
| C5 | 1.0132 (3) | 0.7830 (3) | 0.6398 (3) | 0.0384 (7) | |
| H5A | 1.0350 | 0.6822 | 0.6055 | 0.058* | |
| H5B | 1.0544 | 0.7876 | 0.7168 | 0.058* | |
| H5C | 1.0634 | 0.8621 | 0.5831 | 0.058* | |
| C6 | 0.7934 (3) | 0.9641 (3) | 0.7138 (3) | 0.0380 (7) | |
| H6A | 0.6795 | 0.9747 | 0.7249 | 0.057* | |
| H6B | 0.8410 | 1.0454 | 0.6581 | 0.057* | |
| H6C | 0.8303 | 0.9718 | 0.7923 | 0.057* | |
| C7 | 0.4224 (3) | 0.1924 (3) | 0.6265 (2) | 0.0198 (4) | |
| H7 | 0.5144 | 0.1624 | 0.5755 | 0.024* | |
| C8 | 0.3473 (3) | 0.0860 (3) | 0.7094 (2) | 0.0210 (5) | |
| H8 | 0.3865 | −0.0153 | 0.7138 | 0.025* | |
| C9 | 0.2132 (3) | 0.1289 (3) | 0.7867 (2) | 0.0194 (4) | |
| C10 | 0.1577 (3) | 0.2772 (3) | 0.7726 (2) | 0.0212 (5) | |
| H10 | 0.0653 | 0.3102 | 0.8217 | 0.025* | |
| C11 | 0.2384 (3) | 0.3754 (3) | 0.6868 (2) | 0.0208 (5) | |
| H11 | 0.1990 | 0.4758 | 0.6775 | 0.025* | |
| C12 | 0.1396 (3) | 0.0206 (3) | 0.8798 (2) | 0.0225 (5) | |
| H12 | 0.1765 | −0.0817 | 0.8815 | 0.027* |
| Ni | 0.0173 (2) | 0.0127 (2) | 0.0143 (2) | 0.00009 (15) | 0.00006 (15) | 0.00119 (14) |
| S1 | 0.0197 (3) | 0.0198 (3) | 0.0170 (3) | 0.0034 (2) | −0.0009 (2) | −0.0008 (2) |
| S2 | 0.0208 (3) | 0.0174 (3) | 0.0183 (3) | 0.0039 (2) | −0.0023 (2) | −0.0019 (2) |
| P1 | 0.0192 (3) | 0.0193 (3) | 0.0158 (3) | 0.0020 (2) | −0.0015 (2) | −0.0011 (2) |
| O1 | 0.0243 (8) | 0.0249 (8) | 0.0174 (8) | 0.0055 (7) | −0.0025 (6) | 0.0016 (6) |
| O2 | 0.0240 (9) | 0.0279 (9) | 0.0209 (9) | −0.0010 (7) | −0.0045 (7) | −0.0036 (7) |
| N1 | 0.0182 (9) | 0.0170 (9) | 0.0165 (9) | −0.0004 (7) | 0.0013 (7) | 0.0017 (7) |
| N2 | 0.0238 (10) | 0.0212 (10) | 0.0223 (11) | −0.0065 (8) | 0.0006 (8) | 0.0090 (8) |
| C1 | 0.0270 (12) | 0.0323 (13) | 0.0186 (12) | 0.0112 (10) | −0.0032 (10) | 0.0033 (9) |
| C2 | 0.0412 (15) | 0.0265 (13) | 0.0280 (14) | 0.0055 (11) | −0.0096 (11) | 0.0026 (10) |
| C3 | 0.0256 (13) | 0.0412 (15) | 0.0250 (13) | 0.0024 (11) | −0.0059 (10) | 0.0051 (11) |
| C4 | 0.0274 (12) | 0.0259 (12) | 0.0266 (13) | −0.0038 (10) | −0.0034 (10) | −0.0033 (10) |
| C5 | 0.0279 (14) | 0.0344 (15) | 0.0503 (19) | −0.0032 (12) | 0.0044 (12) | −0.0087 (13) |
| C6 | 0.0298 (14) | 0.0289 (14) | 0.056 (2) | 0.0019 (11) | −0.0081 (13) | −0.0088 (13) |
| C7 | 0.0222 (11) | 0.0181 (10) | 0.0184 (11) | 0.0002 (9) | −0.0008 (9) | 0.0019 (8) |
| C8 | 0.0240 (11) | 0.0155 (10) | 0.0233 (12) | 0.0003 (9) | −0.0028 (9) | 0.0013 (8) |
| C9 | 0.0193 (11) | 0.0199 (11) | 0.0191 (11) | −0.0027 (8) | −0.0040 (8) | 0.0028 (8) |
| C10 | 0.0198 (11) | 0.0209 (11) | 0.0210 (12) | −0.0004 (9) | 0.0023 (9) | 0.0019 (9) |
| C11 | 0.0209 (11) | 0.0184 (10) | 0.0213 (12) | 0.0023 (9) | 0.0020 (9) | 0.0049 (8) |
| C12 | 0.0229 (11) | 0.0224 (11) | 0.0228 (12) | −0.0046 (9) | −0.0062 (9) | 0.0056 (9) |
| Ni—S1 | 2.4827 (7) | C3—H3A | 0.9800 |
| Ni—S2 | 2.4835 (7) | C3—H3B | 0.9800 |
| Ni—N1 | 2.1051 (19) | C3—H3C | 0.9800 |
| Ni—N1i | 2.1051 (19) | C4—C5 | 1.513 (4) |
| Ni—S1i | 2.4827 (7) | C4—C6 | 1.520 (4) |
| Ni—S2i | 2.4835 (7) | C4—H4 | 1.0000 |
| S1—P1 | 1.9895 (9) | C5—H5A | 0.9800 |
| S2—P1 | 1.9859 (9) | C5—H5B | 0.9800 |
| P1—O1 | 1.5779 (17) | C5—H5C | 0.9800 |
| P1—O2 | 1.5934 (18) | C6—H6A | 0.9800 |
| O1—C1 | 1.476 (3) | C6—H6B | 0.9800 |
| O2—C4 | 1.464 (3) | C6—H6C | 0.9800 |
| N1—C7 | 1.338 (3) | C7—C8 | 1.384 (3) |
| N1—C11 | 1.350 (3) | C7—H7 | 0.9500 |
| N2—C12 | 1.283 (3) | C8—C9 | 1.399 (3) |
| N2—N2ii | 1.408 (4) | C8—H8 | 0.9500 |
| C1—C2 | 1.510 (4) | C9—C10 | 1.395 (3) |
| C1—C3 | 1.511 (4) | C9—C12 | 1.459 (3) |
| C1—H1 | 1.0000 | C10—C11 | 1.377 (3) |
| C2—H2A | 0.9800 | C10—H10 | 0.9500 |
| C2—H2B | 0.9800 | C11—H11 | 0.9500 |
| C2—H2C | 0.9800 | C12—H12 | 0.9500 |
| N1—Ni—S1i | 89.02 (6) | C1—C3—H3B | 109.5 |
| N1i—Ni—S1i | 90.98 (6) | H3A—C3—H3B | 109.5 |
| N1—Ni—S1 | 90.98 (6) | C1—C3—H3C | 109.5 |
| N1i—Ni—S1 | 89.02 (6) | H3A—C3—H3C | 109.5 |
| N1—Ni—S2i | 91.02 (6) | H3B—C3—H3C | 109.5 |
| N1i—Ni—S2i | 88.98 (6) | O2—C4—C5 | 107.1 (2) |
| S1i—Ni—S2i | 82.46 (2) | O2—C4—C6 | 107.0 (2) |
| S1—Ni—S2i | 97.54 (2) | C5—C4—C6 | 113.4 (2) |
| N1—Ni—S2 | 88.98 (6) | O2—C4—H4 | 109.8 |
| N1i—Ni—S2 | 91.02 (6) | C5—C4—H4 | 109.8 |
| S1i—Ni—S2 | 97.54 (2) | C6—C4—H4 | 109.8 |
| S1—Ni—S2 | 82.46 (2) | C4—C5—H5A | 109.5 |
| S1i—Ni—S1 | 180.0 | C4—C5—H5B | 109.5 |
| S2i—Ni—S2 | 180.0 | H5A—C5—H5B | 109.5 |
| N1i—Ni—N1 | 180.0 | C4—C5—H5C | 109.5 |
| P1—S1—Ni | 82.80 (3) | H5A—C5—H5C | 109.5 |
| P1—S2—Ni | 82.85 (3) | H5B—C5—H5C | 109.5 |
| O1—P1—O2 | 100.84 (10) | C4—C6—H6A | 109.5 |
| O1—P1—S2 | 108.61 (7) | C4—C6—H6B | 109.5 |
| O2—P1—S2 | 111.61 (7) | H6A—C6—H6B | 109.5 |
| O1—P1—S1 | 112.72 (7) | C4—C6—H6C | 109.5 |
| O2—P1—S1 | 111.82 (7) | H6A—C6—H6C | 109.5 |
| S2—P1—S1 | 110.84 (4) | H6B—C6—H6C | 109.5 |
| C1—O1—P1 | 122.47 (15) | N1—C7—C8 | 122.9 (2) |
| C4—O2—P1 | 119.75 (15) | N1—C7—H7 | 118.6 |
| C7—N1—C11 | 117.73 (19) | C8—C7—H7 | 118.6 |
| C7—N1—Ni | 121.63 (15) | C7—C8—C9 | 119.4 (2) |
| C11—N1—Ni | 120.48 (15) | C7—C8—H8 | 120.3 |
| C12—N2—N2ii | 111.3 (2) | C9—C8—H8 | 120.3 |
| O1—C1—C2 | 106.2 (2) | C10—C9—C8 | 117.6 (2) |
| O1—C1—C3 | 108.7 (2) | C10—C9—C12 | 122.7 (2) |
| C2—C1—C3 | 113.5 (2) | C8—C9—C12 | 119.7 (2) |
| O1—C1—H1 | 109.5 | C11—C10—C9 | 119.2 (2) |
| C2—C1—H1 | 109.5 | C11—C10—H10 | 120.4 |
| C3—C1—H1 | 109.5 | C9—C10—H10 | 120.4 |
| C1—C2—H2A | 109.5 | N1—C11—C10 | 123.1 (2) |
| C1—C2—H2B | 109.5 | N1—C11—H11 | 118.4 |
| H2A—C2—H2B | 109.5 | C10—C11—H11 | 118.4 |
| C1—C2—H2C | 109.5 | N2—C12—C9 | 121.1 (2) |
| H2A—C2—H2C | 109.5 | N2—C12—H12 | 119.4 |
| H2B—C2—H2C | 109.5 | C9—C12—H12 | 119.4 |
| C1—C3—H3A | 109.5 | ||
| N1—Ni—S1—P1 | −82.10 (6) | S2—Ni—N1—C7 | −131.96 (18) |
| N1i—Ni—S1—P1 | 97.90 (6) | S1i—Ni—N1—C11 | −54.34 (18) |
| S2i—Ni—S1—P1 | −173.26 (3) | S1—Ni—N1—C11 | 125.66 (18) |
| S2—Ni—S1—P1 | 6.74 (3) | S2i—Ni—N1—C11 | −136.78 (18) |
| N1—Ni—S2—P1 | 84.37 (6) | S2—Ni—N1—C11 | 43.22 (18) |
| N1i—Ni—S2—P1 | −95.63 (6) | P1—O1—C1—C2 | −137.26 (18) |
| S1i—Ni—S2—P1 | 173.24 (3) | P1—O1—C1—C3 | 100.3 (2) |
| S1—Ni—S2—P1 | −6.76 (3) | P1—O2—C4—C5 | −119.8 (2) |
| Ni—S2—P1—O1 | −115.40 (7) | P1—O2—C4—C6 | 118.37 (19) |
| Ni—S2—P1—O2 | 134.30 (7) | C11—N1—C7—C8 | −1.3 (3) |
| Ni—S2—P1—S1 | 8.96 (3) | Ni—N1—C7—C8 | 174.02 (18) |
| Ni—S1—P1—O1 | 113.02 (8) | N1—C7—C8—C9 | −1.1 (4) |
| Ni—S1—P1—O2 | −134.19 (7) | C7—C8—C9—C10 | 2.6 (3) |
| Ni—S1—P1—S2 | −8.96 (3) | C7—C8—C9—C12 | −175.8 (2) |
| O2—P1—O1—C1 | −75.87 (19) | C8—C9—C10—C11 | −1.8 (3) |
| S2—P1—O1—C1 | 166.73 (16) | C12—C9—C10—C11 | 176.6 (2) |
| S1—P1—O1—C1 | 43.51 (19) | C7—N1—C11—C10 | 2.1 (4) |
| O1—P1—O2—C4 | −173.76 (16) | Ni—N1—C11—C10 | −173.22 (18) |
| S2—P1—O2—C4 | −58.58 (17) | C9—C10—C11—N1 | −0.6 (4) |
| S1—P1—O2—C4 | 66.22 (17) | N2ii—N2—C12—C9 | −179.5 (2) |
| S1i—Ni—N1—C7 | 130.48 (18) | C10—C9—C12—N2 | −5.2 (4) |
| S1—Ni—N1—C7 | −49.52 (18) | C8—C9—C12—N2 | 173.1 (2) |
| S2i—Ni—N1—C7 | 48.04 (18) |
| H··· | ||||
| C8—H8···S2iii | 0.95 | 2.77 | 3.694 (3) | 164 |
| Ni—S1 | 2.4827 (7) |
| Ni—S2 | 2.4835 (7) |
| Ni—N1 | 2.1051 (19) |
| S1—Ni—S2 | 82.46 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C8—H8⋯S2i | 0.95 | 2.77 | 3.694 (3) | 164 |
Symmetry code: (i) .