| Literature DB >> 21578156 |
Jie Xu1, Wenxiang Chai, Jian Lin, Hongsheng Shi, Kangying Shu.
Abstract
The search for the novel metal-organic frameworks (MOFs) materials using tetra-hydro-furan-2,3,4,5-tetra-carboxylic acid (THFTCA) as a versatile multi-carboxyl ligand, lead to the synthesis and the structure determination of the title compound, [Na(H(3)THFTCA)] or [Na(C(8)H(7)O(9))](n), which was obtained by a solution reaction at room temperature. The ligand is mono-deprotonated, coordinating five sodium ions through one furan oxygen atom and six carboxyl oxygen atoms. The sodium ion exhibits a distorted penta-gonal-bipyramidal NaO(7) geometry consisting of seven O atoms derived from five surrounding ligands. Two adjacent pentagonal bipyramids share an O-O edge, forming a dinuclear sodium cluster. Finally, these clusters are effectively linked by the carboxyl groups of THFTCA ligands, forming a firm metal organic framework and O-H⋯O hydrogen bonds contribute to the crystal packing.Entities:
Year: 2009 PMID: 21578156 PMCID: PMC2971171 DOI: 10.1107/S160053680904269X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Na(C8H7O9)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 8534 reflections |
| θ = 3.0–27.4° | |
| µ = 0.20 mm−1 | |
| β = 109.90 (3)° | Platelet, colorless |
| 0.41 × 0.28 × 0.10 mm | |
| Rigaku R-AXIS RAPID diffractometer | 2263 independent reflections |
| Radiation source: fine-focus sealed tube | 2095 reflections with |
| graphite | |
| Detector resolution: 14.6306 pixels mm-1 | θmax = 27.4°, θmin = 3.0° |
| CCD_Profile_fitting scans | |
| Absorption correction: multi-scan ( | |
| 9567 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2263 reflections | Δρmax = 0.39 e Å−3 |
| 164 parameters | Δρmin = −0.31 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.034 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Na1 | 0.16477 (7) | 0.01271 (4) | 0.39826 (6) | 0.02678 (17) | |
| O1 | 0.19961 (11) | 0.20181 (7) | 0.39121 (9) | 0.0179 (2) | |
| O2 | −0.03876 (14) | 0.10910 (7) | 0.48915 (13) | 0.0313 (3) | |
| O3 | −0.17693 (14) | 0.25311 (8) | 0.49566 (13) | 0.0333 (3) | |
| H3 | −0.2454 | 0.2189 | 0.5252 | 0.033* | |
| O4 | 0.02774 (14) | 0.47842 (9) | 0.33101 (13) | 0.0362 (3) | |
| O5 | 0.31727 (15) | 0.46326 (10) | 0.42755 (16) | 0.0506 (4) | |
| H5 | 0.3204 | 0.5163 | 0.3827 | 0.051* | |
| O6 | 0.60941 (12) | 0.37079 (7) | 0.68721 (11) | 0.0251 (2) | |
| O7 | 0.39834 (13) | 0.43913 (7) | 0.75861 (11) | 0.0281 (2) | |
| H7 | 0.4778 | 0.4798 | 0.8028 | 0.028* | |
| O8 | 0.39053 (12) | 0.07324 (7) | 0.60685 (11) | 0.0234 (2) | |
| O9 | 0.63546 (12) | 0.13823 (7) | 0.58976 (12) | 0.0272 (2) | |
| C11 | 0.05765 (15) | 0.26035 (9) | 0.40594 (13) | 0.0167 (2) | |
| H11 | −0.0167 | 0.2819 | 0.3091 | 0.017* | |
| C22 | 0.14282 (15) | 0.34871 (9) | 0.50496 (13) | 0.0159 (2) | |
| H22 | 0.0684 | 0.3706 | 0.5593 | 0.016* | |
| C33 | 0.31740 (15) | 0.30122 (8) | 0.60199 (12) | 0.0147 (2) | |
| H33 | 0.2877 | 0.2598 | 0.6734 | 0.015* | |
| C44 | 0.36719 (15) | 0.23349 (8) | 0.49541 (12) | 0.0149 (2) | |
| H44 | 0.4337 | 0.2705 | 0.4470 | 0.015* | |
| C55 | −0.05776 (16) | 0.19811 (10) | 0.46899 (14) | 0.0202 (3) | |
| C66 | 0.15670 (16) | 0.43746 (9) | 0.41175 (14) | 0.0197 (3) | |
| C77 | 0.45783 (16) | 0.37456 (9) | 0.68641 (13) | 0.0178 (2) | |
| C88 | 0.47422 (15) | 0.14121 (9) | 0.56952 (13) | 0.0163 (2) |
| Na1 | 0.0233 (3) | 0.0215 (3) | 0.0317 (3) | −0.0036 (2) | 0.0044 (2) | −0.0026 (2) |
| O1 | 0.0145 (4) | 0.0192 (4) | 0.0191 (4) | 0.0008 (3) | 0.0043 (3) | −0.0038 (3) |
| O2 | 0.0268 (5) | 0.0179 (5) | 0.0538 (7) | 0.0001 (4) | 0.0195 (5) | 0.0058 (4) |
| O3 | 0.0272 (5) | 0.0212 (5) | 0.0619 (7) | −0.0005 (4) | 0.0286 (5) | 0.0012 (5) |
| O4 | 0.0261 (5) | 0.0321 (6) | 0.0424 (6) | 0.0028 (4) | 0.0012 (5) | 0.0170 (5) |
| O5 | 0.0222 (6) | 0.0509 (7) | 0.0725 (9) | −0.0036 (5) | 0.0078 (6) | 0.0436 (7) |
| O6 | 0.0173 (5) | 0.0233 (5) | 0.0327 (5) | −0.0026 (4) | 0.0059 (4) | 0.0003 (4) |
| O7 | 0.0258 (5) | 0.0243 (5) | 0.0355 (5) | −0.0092 (4) | 0.0123 (4) | −0.0145 (4) |
| O8 | 0.0186 (4) | 0.0189 (4) | 0.0319 (5) | 0.0009 (4) | 0.0077 (4) | 0.0092 (4) |
| O9 | 0.0158 (4) | 0.0232 (5) | 0.0433 (6) | 0.0031 (4) | 0.0112 (4) | 0.0073 (4) |
| C11 | 0.0146 (5) | 0.0151 (5) | 0.0195 (5) | 0.0006 (4) | 0.0047 (4) | 0.0002 (4) |
| C22 | 0.0140 (5) | 0.0138 (5) | 0.0199 (5) | −0.0006 (4) | 0.0056 (4) | 0.0000 (4) |
| C33 | 0.0154 (5) | 0.0128 (5) | 0.0161 (5) | −0.0004 (4) | 0.0058 (4) | 0.0007 (4) |
| C44 | 0.0142 (5) | 0.0142 (5) | 0.0164 (5) | −0.0006 (4) | 0.0052 (4) | 0.0012 (4) |
| C55 | 0.0152 (5) | 0.0188 (6) | 0.0256 (6) | −0.0023 (5) | 0.0057 (5) | −0.0010 (5) |
| C66 | 0.0190 (6) | 0.0151 (5) | 0.0238 (6) | 0.0001 (4) | 0.0057 (5) | 0.0014 (4) |
| C77 | 0.0197 (6) | 0.0149 (5) | 0.0171 (5) | −0.0017 (4) | 0.0042 (4) | 0.0021 (4) |
| C88 | 0.0158 (5) | 0.0149 (5) | 0.0182 (5) | 0.0009 (4) | 0.0058 (4) | −0.0008 (4) |
| Na1—O4i | 2.2903 (14) | O7—C77 | 1.3056 (16) |
| Na1—O8 | 2.3626 (14) | O7—Na1vi | 2.7495 (13) |
| Na1—O2ii | 2.3800 (12) | O7—H7 | 0.8400 |
| Na1—O2 | 2.4778 (13) | O8—C88 | 1.2595 (15) |
| Na1—O1 | 2.5561 (12) | O9—C88 | 1.2480 (15) |
| Na1—O9iii | 2.5658 (12) | O9—Na1iii | 2.5658 (12) |
| Na1—O7iv | 2.7495 (13) | C11—C55 | 1.5264 (17) |
| O1—C11 | 1.4354 (14) | C11—C22 | 1.5349 (16) |
| O1—C44 | 1.4502 (14) | C11—H11 | 0.9734 |
| O2—C55 | 1.2114 (16) | C22—C66 | 1.5242 (17) |
| O2—Na1ii | 2.3800 (12) | C22—C33 | 1.5413 (16) |
| O3—C55 | 1.3061 (16) | C22—H22 | 0.9710 |
| O3—H3 | 0.8400 | C33—C77 | 1.5143 (16) |
| O4—C66 | 1.2021 (17) | C33—C44 | 1.5322 (16) |
| O4—Na1v | 2.2903 (14) | C33—H33 | 0.9811 |
| O5—C66 | 1.2982 (17) | C44—C88 | 1.5410 (16) |
| O5—H5 | 0.8402 | C44—H44 | 0.9638 |
| O6—C77 | 1.2210 (16) | ||
| O4i—Na1—O8 | 167.22 (5) | O1—C11—C22 | 106.48 (9) |
| O4i—Na1—O2ii | 93.25 (5) | C55—C11—C22 | 111.95 (10) |
| O8—Na1—O2ii | 99.51 (4) | O1—C11—H11 | 108.4 |
| O4i—Na1—O2 | 98.11 (5) | C55—C11—H11 | 107.0 |
| O8—Na1—O2 | 85.65 (4) | C22—C11—H11 | 112.0 |
| O2ii—Na1—O2 | 75.83 (4) | C66—C22—C11 | 109.71 (10) |
| O4i—Na1—O1 | 102.56 (4) | C66—C22—C33 | 116.80 (10) |
| O8—Na1—O1 | 67.81 (3) | C11—C22—C33 | 100.71 (9) |
| O2ii—Na1—O1 | 139.65 (4) | C66—C22—H22 | 105.8 |
| O2—Na1—O1 | 65.41 (3) | C11—C22—H22 | 110.4 |
| O4i—Na1—O9iii | 95.32 (5) | C33—C22—H22 | 113.4 |
| O8—Na1—O9iii | 86.78 (4) | C77—C33—C44 | 115.65 (10) |
| O2ii—Na1—O9iii | 78.30 (4) | C77—C33—C22 | 114.99 (10) |
| O2—Na1—O9iii | 151.39 (4) | C44—C33—C22 | 103.04 (9) |
| O1—Na1—O9iii | 135.36 (4) | C77—C33—H33 | 107.5 |
| O4i—Na1—O7iv | 85.22 (5) | C44—C33—H33 | 109.1 |
| O8—Na1—O7iv | 83.50 (4) | C22—C33—H33 | 106.0 |
| O2ii—Na1—O7iv | 149.44 (4) | O1—C44—C33 | 104.52 (9) |
| O2—Na1—O7iv | 134.65 (4) | O1—C44—C88 | 109.41 (9) |
| O1—Na1—O7iv | 69.72 (3) | C33—C44—C88 | 113.18 (9) |
| O9iii—Na1—O7iv | 71.49 (4) | O1—C44—H44 | 110.5 |
| C11—O1—C44 | 110.80 (9) | C33—C44—H44 | 110.1 |
| C11—O1—Na1 | 116.21 (7) | C88—C44—H44 | 109.1 |
| C44—O1—Na1 | 110.91 (6) | O2—C55—O3 | 125.86 (12) |
| C55—O2—Na1ii | 134.52 (9) | O2—C55—C11 | 122.93 (12) |
| C55—O2—Na1 | 121.28 (9) | O3—C55—C11 | 111.21 (11) |
| Na1ii—O2—Na1 | 104.17 (4) | O4—C66—O5 | 124.19 (13) |
| C55—O3—H3 | 111.9 | O4—C66—C22 | 121.59 (12) |
| C66—O4—Na1v | 151.37 (11) | O5—C66—C22 | 114.22 (11) |
| C66—O5—H5 | 111.7 | O6—C77—O7 | 125.09 (12) |
| C77—O7—Na1vi | 149.49 (8) | O6—C77—C33 | 122.61 (11) |
| C77—O7—H7 | 110.5 | O7—C77—C33 | 112.29 (11) |
| Na1vi—O7—H7 | 97.2 | O9—C88—O8 | 124.29 (11) |
| C88—O8—Na1 | 109.44 (8) | O9—C88—C44 | 119.16 (11) |
| C88—O9—Na1iii | 129.58 (8) | O8—C88—C44 | 116.55 (10) |
| O1—C11—C55 | 110.94 (10) | ||
| O4i—Na1—O1—C11 | 77.60 (8) | C11—C22—C33—C77 | 164.09 (10) |
| O8—Na1—O1—C11 | −111.21 (8) | C66—C22—C33—C44 | −81.34 (12) |
| O2ii—Na1—O1—C11 | −33.01 (10) | C11—C22—C33—C44 | 37.35 (11) |
| O2—Na1—O1—C11 | −15.66 (7) | C11—O1—C44—C33 | 12.61 (12) |
| O9iii—Na1—O1—C11 | −171.25 (7) | Na1—O1—C44—C33 | −117.99 (7) |
| O7iv—Na1—O1—C11 | 157.62 (8) | C11—O1—C44—C88 | 134.10 (10) |
| O4i—Na1—O1—C44 | −154.68 (7) | Na1—O1—C44—C88 | 3.50 (10) |
| O8—Na1—O1—C44 | 16.50 (7) | C77—C33—C44—O1 | −157.88 (9) |
| O2ii—Na1—O1—C44 | 94.70 (9) | C22—C33—C44—O1 | −31.56 (11) |
| O2—Na1—O1—C44 | 112.05 (8) | C77—C33—C44—C88 | 83.16 (12) |
| O9iii—Na1—O1—C44 | −43.54 (9) | C22—C33—C44—C88 | −150.52 (10) |
| O7iv—Na1—O1—C44 | −74.67 (7) | Na1ii—O2—C55—O3 | −7.4 (2) |
| O4i—Na1—O2—C55 | −87.32 (12) | Na1—O2—C55—O3 | 170.75 (11) |
| O8—Na1—O2—C55 | 80.39 (11) | Na1ii—O2—C55—C11 | 173.27 (9) |
| O2ii—Na1—O2—C55 | −178.65 (14) | Na1—O2—C55—C11 | −8.56 (18) |
| O1—Na1—O2—C55 | 12.84 (10) | O1—C11—C55—O2 | −6.66 (17) |
| O9iii—Na1—O2—C55 | 155.50 (10) | C22—C11—C55—O2 | −125.45 (14) |
| O7iv—Na1—O2—C55 | 3.96 (14) | O1—C11—C55—O3 | 173.94 (10) |
| O4i—Na1—O2—Na1ii | 91.33 (5) | C22—C11—C55—O3 | 55.15 (14) |
| O8—Na1—O2—Na1ii | −100.96 (5) | Na1v—O4—C66—O5 | 73.4 (3) |
| O2ii—Na1—O2—Na1ii | 0.0 | Na1v—O4—C66—C22 | −106.3 (2) |
| O1—Na1—O2—Na1ii | −168.51 (6) | C11—C22—C66—O4 | 65.15 (16) |
| O9iii—Na1—O2—Na1ii | −25.85 (10) | C33—C22—C66—O4 | 178.86 (12) |
| O7iv—Na1—O2—Na1ii | −177.39 (5) | C11—C22—C66—O5 | −114.57 (14) |
| O4i—Na1—O8—C88 | 3.2 (2) | C33—C22—C66—O5 | −0.86 (17) |
| O2ii—Na1—O8—C88 | −179.35 (8) | Na1vi—O7—C77—O6 | −151.33 (12) |
| O2—Na1—O8—C88 | −104.52 (9) | Na1vi—O7—C77—C33 | 27.3 (2) |
| O1—Na1—O8—C88 | −39.34 (8) | C44—C33—C77—O6 | −10.65 (16) |
| O9iii—Na1—O8—C88 | 103.09 (9) | C22—C33—C77—O6 | −130.65 (12) |
| O7iv—Na1—O8—C88 | 31.37 (8) | C44—C33—C77—O7 | 170.70 (10) |
| C44—O1—C11—C55 | −110.30 (11) | C22—C33—C77—O7 | 50.70 (14) |
| Na1—O1—C11—C55 | 17.46 (12) | Na1iii—O9—C88—O8 | 29.64 (19) |
| C44—O1—C11—C22 | 11.74 (12) | Na1iii—O9—C88—C44 | −150.88 (8) |
| Na1—O1—C11—C22 | 139.51 (7) | Na1—O8—C88—O9 | −120.38 (12) |
| O1—C11—C22—C66 | 93.14 (11) | Na1—O8—C88—C44 | 60.13 (12) |
| C55—C11—C22—C66 | −145.46 (10) | O1—C44—C88—O9 | 138.01 (11) |
| O1—C11—C22—C33 | −30.58 (11) | C33—C44—C88—O9 | −105.88 (13) |
| C55—C11—C22—C33 | 90.82 (11) | O1—C44—C88—O8 | −42.47 (14) |
| C66—C22—C33—C77 | 45.40 (14) | C33—C44—C88—O8 | 73.63 (13) |
| H··· | ||||
| O3—H3···O9vii | 0.84 | 1.70 | 2.5395 (15) | 173 |
| O5—H5···O6viii | 0.84 | 1.83 | 2.6468 (16) | 165 |
| O7—H7···O8ix | 0.84 | 1.68 | 2.5169 (14) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O9i | 0.84 | 1.70 | 2.5395 (15) | 173 |
| O5—H5⋯O6ii | 0.84 | 1.83 | 2.6468 (16) | 165 |
| O7—H7⋯O8iii | 0.84 | 1.68 | 2.5169 (14) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) .