Literature DB >> 21578081

Di-μ-nitrito-κO:O,O';κO,O':O-bis-{[2,6-bis-(pyrazol-1-yl-κN)pyridine-κN](nitrito-κO,O')cadmium(II)}.

Ting Ting Sun1, Lin Meng, Jing Min Shi.   

Abstract

In the title centrosymmetric binuclear complex, [Cd(2)(NO(2))(4)(C(11)H(9)N(5))(2)], the unique Cd(II) ion is in a distorted dodeca-hedral CdN(3)O(5) coordination environment. The two inversion-related Cd(II) ions are separated by 3.9920 (6) Å and are bridged by two O atoms from two nitrite ligands. There are two types of π-π stacking inter-actions involving symmetry-related pyrazole rings, with centroid-centroid distances of 3.445 (2) and 3.431 (2) Å.

Entities:  

Year:  2009        PMID: 21578081      PMCID: PMC2971109          DOI: 10.1107/S1600536809039841

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Yang & Sun (2008 ▶); Bessel et al. (1993 ▶).

Experimental

Crystal data

[Cd2(NO2)4(C11H9N5)2] M = 831.30 Triclinic, a = 7.7618 (13) Å b = 9.5522 (16) Å c = 10.9665 (19) Å α = 110.285 (2)° β = 90.616 (2)° γ = 112.155 (2)° V = 696.9 (2) Å3 Z = 1 Mo Kα radiation μ = 1.60 mm−1 T = 298 K 0.32 × 0.21 × 0.10 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.628, T max = 0.856 3815 measured reflections 2666 independent reflections 2468 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.076 S = 1.09 2666 reflections 208 parameters H-atom parameters constrained Δρmax = 0.56 e Å−3 Δρmin = −0.53 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809039841/lh2917sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039841/lh2917Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd2(NO2)4(C11H9N5)2]Z = 1
Mr = 831.30F(000) = 408
Triclinic, P1Dx = 1.981 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.7618 (13) ÅCell parameters from 2504 reflections
b = 9.5522 (16) Åθ = 2.5–27.8°
c = 10.9665 (19) ŵ = 1.60 mm1
α = 110.285 (2)°T = 298 K
β = 90.616 (2)°Block, colorless
γ = 112.155 (2)°0.32 × 0.21 × 0.10 mm
V = 696.9 (2) Å3
Bruker SMART APEX CCD diffractometer2666 independent reflections
Radiation source: fine-focus sealed tube2468 reflections with I > 2σ(I)
graphiteRint = 0.017
φ and ω scansθmax = 26.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −9→9
Tmin = 0.628, Tmax = 0.856k = −11→11
3815 measured reflectionsl = −7→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.076H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.044P)2] where P = (Fo2 + 2Fc2)/3
2666 reflections(Δ/σ)max = 0.002
208 parametersΔρmax = 0.56 e Å3
0 restraintsΔρmin = −0.53 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.0700 (5)0.7853 (5)0.7004 (4)0.0445 (8)
H1−0.03640.89740.73450.053*
C2−0.2364 (5)0.6713 (5)0.6144 (4)0.0454 (8)
H2−0.33150.69200.58170.055*
C3−0.2301 (4)0.5239 (5)0.5885 (3)0.0431 (8)
H3−0.32070.42270.53380.052*
C40.0015 (4)0.4386 (4)0.6698 (3)0.0296 (6)
C50.2520 (4)0.4068 (3)0.7464 (3)0.0298 (6)
C60.1560 (4)0.2398 (4)0.7011 (4)0.0405 (7)
H60.21250.17360.71170.049*
C7−0.0287 (5)0.1747 (4)0.6390 (3)0.0449 (8)
H7−0.09840.06230.60740.054*
C8−0.1103 (5)0.2735 (4)0.6234 (3)0.0410 (8)
H8−0.23500.23110.58350.049*
C90.5554 (4)0.4211 (4)0.8411 (3)0.0357 (7)
H90.52910.31050.81420.043*
C100.7180 (4)0.5479 (4)0.9151 (3)0.0373 (7)
H100.82470.54190.94810.045*
C110.6898 (4)0.6888 (4)0.9306 (3)0.0364 (7)
H110.77810.79450.97780.044*
Cd10.35091 (3)0.79984 (2)0.84217 (2)0.03281 (10)
N10.0340 (4)0.7146 (3)0.7277 (3)0.0374 (6)
N2−0.0654 (3)0.5526 (3)0.6580 (3)0.0340 (6)
N30.1788 (3)0.5057 (3)0.7307 (2)0.0290 (5)
N40.4388 (3)0.4869 (3)0.8142 (2)0.0291 (5)
N50.5215 (3)0.6530 (3)0.8697 (2)0.0323 (5)
N60.2056 (4)0.8778 (4)1.0874 (3)0.0506 (7)
N70.4464 (4)0.9665 (4)0.6637 (3)0.0485 (7)
O10.1706 (4)0.7339 (3)1.0265 (3)0.0568 (7)
O20.3107 (4)0.9700 (3)1.0329 (3)0.0542 (7)
O30.3877 (4)1.0225 (3)0.7663 (3)0.0506 (6)
O40.4610 (4)0.8348 (3)0.6500 (3)0.0491 (6)
U11U22U33U12U13U23
C10.0479 (19)0.048 (2)0.054 (2)0.0301 (17)0.0146 (16)0.0260 (18)
C20.0422 (18)0.062 (2)0.048 (2)0.0337 (17)0.0107 (15)0.0256 (18)
C30.0323 (16)0.056 (2)0.0377 (18)0.0187 (16)0.0004 (14)0.0135 (16)
C40.0314 (14)0.0328 (15)0.0262 (14)0.0157 (13)0.0086 (12)0.0100 (12)
C50.0325 (14)0.0285 (14)0.0298 (14)0.0139 (12)0.0074 (12)0.0110 (12)
C60.0434 (18)0.0305 (15)0.0486 (19)0.0162 (14)0.0023 (15)0.0147 (14)
C70.0458 (19)0.0280 (16)0.051 (2)0.0087 (14)−0.0021 (16)0.0111 (15)
C80.0353 (16)0.0388 (18)0.0395 (18)0.0087 (14)−0.0009 (14)0.0112 (15)
C90.0379 (16)0.0376 (16)0.0449 (18)0.0231 (14)0.0152 (14)0.0219 (15)
C100.0312 (15)0.0472 (19)0.0455 (18)0.0210 (14)0.0100 (14)0.0256 (16)
C110.0314 (15)0.0367 (16)0.0412 (17)0.0109 (13)0.0041 (13)0.0182 (14)
Cd10.03791 (15)0.02645 (14)0.03535 (15)0.01474 (11)0.00396 (10)0.01137 (10)
N10.0360 (14)0.0340 (14)0.0457 (16)0.0174 (12)0.0059 (12)0.0158 (12)
N20.0312 (13)0.0396 (14)0.0345 (14)0.0175 (12)0.0061 (11)0.0144 (12)
N30.0303 (12)0.0283 (12)0.0305 (13)0.0138 (10)0.0043 (10)0.0115 (10)
N40.0302 (12)0.0271 (12)0.0338 (13)0.0136 (10)0.0055 (10)0.0137 (11)
N50.0324 (13)0.0262 (12)0.0396 (14)0.0120 (11)0.0054 (11)0.0138 (11)
N60.0513 (18)0.0524 (19)0.0435 (17)0.0200 (15)0.0137 (14)0.0140 (15)
N70.0554 (18)0.0436 (17)0.0508 (18)0.0175 (15)0.0031 (15)0.0257 (15)
O10.0566 (16)0.0422 (15)0.0591 (17)0.0080 (13)0.0077 (13)0.0181 (14)
O20.0708 (17)0.0338 (13)0.0464 (14)0.0131 (12)0.0090 (13)0.0108 (11)
O30.0584 (15)0.0340 (12)0.0602 (17)0.0202 (12)0.0044 (13)0.0171 (12)
O40.0610 (16)0.0464 (14)0.0462 (14)0.0291 (13)0.0099 (12)0.0166 (12)
C1—N11.320 (4)C9—C101.364 (4)
C1—C21.395 (5)C9—H90.9300
C1—H10.9300C10—C111.397 (5)
C2—C31.357 (5)C10—H100.9300
C2—H20.9300C11—N51.325 (4)
C3—N21.364 (4)C11—H110.9300
C3—H30.9300Cd1—O22.270 (3)
C4—N31.330 (4)Cd1—N52.345 (2)
C4—C81.379 (4)Cd1—O42.365 (3)
C4—N21.413 (4)Cd1—N32.434 (2)
C5—N31.328 (4)Cd1—N12.450 (3)
C5—C61.376 (4)Cd1—O32.464 (2)
C5—N41.409 (4)Cd1—O12.592 (3)
C6—C71.385 (4)N1—N21.357 (4)
C6—H60.9300N4—N51.361 (3)
C7—C81.371 (5)N6—O11.220 (4)
C7—H70.9300N6—O21.277 (4)
C8—H80.9300N7—O31.240 (4)
C9—N41.361 (4)N7—O41.264 (4)
N1—C1—C2111.8 (3)O4—Cd1—N393.58 (9)
N1—C1—H1124.1O2—Cd1—N194.34 (10)
C2—C1—H1124.1N5—Cd1—N1132.58 (9)
C3—C2—C1105.3 (3)O4—Cd1—N186.53 (9)
C3—C2—H2127.3N3—Cd1—N165.49 (8)
C1—C2—H2127.3O2—Cd1—O383.63 (9)
C2—C3—N2106.8 (3)N5—Cd1—O3139.36 (9)
C2—C3—H3126.6O4—Cd1—O351.23 (9)
N2—C3—H3126.6N3—Cd1—O3130.34 (8)
N3—C4—C8124.0 (3)N1—Cd1—O377.14 (8)
N3—C4—N2113.9 (3)O2—Cd1—O150.02 (9)
C8—C4—N2122.2 (3)N5—Cd1—O187.76 (9)
N3—C5—C6123.6 (3)O4—Cd1—O1169.63 (9)
N3—C5—N4114.4 (2)N3—Cd1—O180.15 (8)
C6—C5—N4122.0 (3)N1—Cd1—O183.36 (9)
C5—C6—C7117.0 (3)O3—Cd1—O1127.86 (9)
C5—C6—H6121.5C1—N1—N2104.8 (3)
C7—C6—H6121.5C1—N1—Cd1137.4 (2)
C8—C7—C6121.0 (3)N2—N1—Cd1117.31 (18)
C8—C7—H7119.5N1—N2—C3111.2 (3)
C6—C7—H7119.5N1—N2—C4120.0 (2)
C7—C8—C4116.8 (3)C3—N2—C4128.7 (3)
C7—C8—H8121.6C5—N3—C4117.6 (3)
C4—C8—H8121.6C5—N3—Cd1119.45 (19)
N4—C9—C10107.1 (3)C4—N3—Cd1122.21 (19)
N4—C9—H9126.4C9—N4—N5111.0 (2)
C10—C9—H9126.4C9—N4—C5128.9 (3)
C9—C10—C11105.3 (3)N5—N4—C5120.0 (2)
C9—C10—H10127.4C11—N5—N4105.1 (2)
C11—C10—H10127.4C11—N5—Cd1136.3 (2)
N5—C11—C10111.5 (3)N4—N5—Cd1118.55 (17)
N5—C11—H11124.2O1—N6—O2112.5 (3)
C10—C11—H11124.2O3—N7—O4113.2 (3)
O2—Cd1—N5114.66 (9)N6—O1—Cd191.5 (2)
O2—Cd1—O4133.53 (9)N6—O2—Cd1105.9 (2)
N5—Cd1—O497.45 (9)N7—O3—Cd195.73 (19)
O2—Cd1—N3128.85 (8)N7—O4—Cd199.9 (2)
N5—Cd1—N367.11 (8)
N1—C1—C2—C3−0.3 (4)O1—Cd1—N3—C483.5 (2)
C1—C2—C3—N20.2 (4)C10—C9—N4—N5−0.4 (3)
N3—C5—C6—C7−1.7 (5)C10—C9—N4—C5−176.8 (3)
N4—C5—C6—C7178.2 (3)N3—C5—N4—C9−176.9 (3)
C5—C6—C7—C80.3 (5)C6—C5—N4—C93.2 (5)
C6—C7—C8—C41.3 (5)N3—C5—N4—N57.0 (4)
N3—C4—C8—C7−1.8 (5)C6—C5—N4—N5−172.9 (3)
N2—C4—C8—C7179.1 (3)C10—C11—N5—N40.2 (4)
N4—C9—C10—C110.5 (4)C10—C11—N5—Cd1179.2 (2)
C9—C10—C11—N5−0.5 (4)C9—N4—N5—C110.1 (3)
C2—C1—N1—N20.3 (4)C5—N4—N5—C11176.8 (3)
C2—C1—N1—Cd1171.8 (2)C9—N4—N5—Cd1−179.10 (18)
O2—Cd1—N1—C155.0 (4)C5—N4—N5—Cd1−2.4 (3)
N5—Cd1—N1—C1−175.4 (3)O2—Cd1—N5—C11−56.5 (3)
O4—Cd1—N1—C1−78.5 (3)O4—Cd1—N5—C1189.0 (3)
N3—Cd1—N1—C1−174.0 (4)N3—Cd1—N5—C11179.8 (3)
O3—Cd1—N1—C1−27.5 (3)N1—Cd1—N5—C11−178.9 (3)
O1—Cd1—N1—C1103.8 (3)O3—Cd1—N5—C1153.8 (4)
O2—Cd1—N1—N2−134.3 (2)O1—Cd1—N5—C11−100.0 (3)
N5—Cd1—N1—N2−4.7 (3)O2—Cd1—N5—N4122.4 (2)
O4—Cd1—N1—N292.3 (2)O4—Cd1—N5—N4−92.1 (2)
N3—Cd1—N1—N2−3.3 (2)N3—Cd1—N5—N4−1.34 (19)
O3—Cd1—N1—N2143.2 (2)N1—Cd1—N5—N40.1 (3)
O1—Cd1—N1—N2−85.4 (2)O3—Cd1—N5—N4−127.3 (2)
C1—N1—N2—C3−0.1 (4)O1—Cd1—N5—N478.9 (2)
Cd1—N1—N2—C3−173.6 (2)O2—N6—O1—Cd1−3.4 (3)
C1—N1—N2—C4−176.7 (3)O2—Cd1—O1—N62.3 (2)
Cd1—N1—N2—C49.8 (3)N5—Cd1—O1—N6127.6 (2)
C2—C3—N2—N1−0.1 (4)O4—Cd1—O1—N6−112.0 (5)
C2—C3—N2—C4176.1 (3)N3—Cd1—O1—N6−165.3 (2)
N3—C4—N2—N1−12.6 (4)N1—Cd1—O1—N6−99.1 (2)
C8—C4—N2—N1166.5 (3)O3—Cd1—O1—N6−31.1 (3)
N3—C4—N2—C3171.5 (3)O1—N6—O2—Cd14.0 (3)
C8—C4—N2—C3−9.4 (5)N5—Cd1—O2—N6−66.1 (2)
C6—C5—N3—C41.3 (5)O4—Cd1—O2—N6164.6 (2)
N4—C5—N3—C4−178.6 (2)N3—Cd1—O2—N613.5 (3)
C6—C5—N3—Cd1171.7 (3)N1—Cd1—O2—N675.3 (2)
N4—C5—N3—Cd1−8.2 (3)O3—Cd1—O2—N6151.8 (2)
C8—C4—N3—C50.6 (4)O1—Cd1—O2—N6−2.3 (2)
N2—C4—N3—C5179.7 (3)O4—N7—O3—Cd1−1.1 (3)
C8—C4—N3—Cd1−169.6 (2)O2—Cd1—O3—N7168.8 (2)
N2—C4—N3—Cd19.5 (3)N5—Cd1—O3—N747.8 (3)
O2—Cd1—N3—C5−98.7 (2)O4—Cd1—O3—N70.71 (19)
N5—Cd1—N3—C55.3 (2)N3—Cd1—O3—N7−54.0 (2)
O4—Cd1—N3—C5101.9 (2)N1—Cd1—O3—N7−95.2 (2)
N1—Cd1—N3—C5−173.6 (2)O1—Cd1—O3—N7−166.11 (18)
O3—Cd1—N3—C5141.5 (2)O3—N7—O4—Cd11.2 (3)
O1—Cd1—N3—C5−86.4 (2)O2—Cd1—O4—N7−17.1 (3)
O2—Cd1—N3—C471.3 (2)N5—Cd1—O4—N7−151.9 (2)
N5—Cd1—N3—C4175.2 (2)N3—Cd1—O4—N7140.7 (2)
O4—Cd1—N3—C4−88.2 (2)N1—Cd1—O4—N775.6 (2)
N1—Cd1—N3—C4−3.6 (2)O3—Cd1—O4—N7−0.70 (19)
O3—Cd1—N3—C4−48.5 (3)O1—Cd1—O4—N788.4 (5)
  2 in total

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dichlorido(2,6-dipyrazol-1-ylpyridine)zinc(II).

Authors:  Zhong Nian Yang; Ting Ting Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-09
  2 in total

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