Literature DB >> 21578062

Chlorido[2-meth-oxy-6-(2-pyridyl-methyl-imino-meth-yl)phenolato]zinc(II).

Ning Sheng1.   

Abstract

In the title mol-ecule, [Zn(C(14)H(13)N(2)O(2))Cl], the Zn(II) ion is coordinated by one O and two N atoms from the Schiff base ligand, and a chloride anion in a distorted square-planar geometry. In the crystal structure, π-π inter-actions link the approximately planar (mean deviation 0.0569 Å) mol-ecules into stacks parallel to the a axis.

Entities:  

Year:  2009        PMID: 21578062      PMCID: PMC2971112          DOI: 10.1107/S1600536809037015

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For properties of transition metal complexes with Schiff base ligands, see: Ghosh et al. (2006 ▶); Singh et al. (2007 ▶); Ward (2007 ▶). For details of the synthesis of the ligand, see Kannappan et al. (2005 ▶). For related structures, see: Li & Zhang (2004 ▶); Chen (2005 ▶); You (2005 ▶).

Experimental

Crystal data

[Zn(C14H13N2O2)Cl] M = 342.08 Monoclinic, a = 7.1013 (5) Å b = 18.2673 (14) Å c = 10.3241 (8) Å β = 104.789 (1)° V = 1294.89 (17) Å3 Z = 4 Mo Kα radiation μ = 2.10 mm−1 T = 293 K 0.31 × 0.25 × 0.23 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.562, T max = 0.643 6845 measured reflections 2538 independent reflections 2263 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.082 S = 1.06 2538 reflections 182 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Sheldrick, 1998 ▶); software used to prepare material for publication: XP. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809037015/cv2598sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809037015/cv2598Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C14H13N2O2)Cl]F(000) = 696
Mr = 342.08Dx = 1.755 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 7.1013 (5) ÅCell parameters from 3850 reflections
b = 18.2673 (14) Åθ = 3.0–26.0°
c = 10.3241 (8) ŵ = 2.10 mm1
β = 104.789 (1)°T = 293 K
V = 1294.89 (17) Å3Block, colourless
Z = 40.31 × 0.25 × 0.23 mm
Bruker APEXII CCD area-detector diffractometer2538 independent reflections
Radiation source: fine-focus sealed tube2263 reflections with I > 2σ(I)
graphiteRint = 0.017
φ and ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −8→8
Tmin = 0.562, Tmax = 0.643k = −18→22
6845 measured reflectionsl = −12→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0487P)2 + 0.6563P] where P = (Fo2 + 2Fc2)/3
2538 reflections(Δ/σ)max = 0.006
182 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.33329 (4)0.484815 (14)0.11005 (3)0.02880 (12)
Cl10.45273 (10)0.40303 (3)0.27143 (6)0.04062 (17)
O10.2046 (2)0.40698 (8)−0.00080 (16)0.0324 (4)
O20.0568 (3)0.28355 (9)−0.10946 (17)0.0389 (4)
N10.4516 (3)0.57415 (10)0.21313 (18)0.0272 (4)
N20.2579 (3)0.55672 (10)−0.03049 (19)0.0276 (4)
C10.0718 (3)0.47592 (12)−0.2000 (2)0.0282 (5)
C20.1050 (3)0.41075 (12)−0.1239 (2)0.0265 (5)
C30.0236 (3)0.34459 (12)−0.1884 (2)0.0295 (5)
C4−0.0793 (3)0.34472 (14)−0.3194 (2)0.0334 (5)
H4−0.12960.3011−0.36050.040*
C5−0.1094 (3)0.40998 (15)−0.3922 (2)0.0356 (5)
H5−0.18030.4094−0.48140.043*
C6−0.0367 (3)0.47439 (13)−0.3345 (2)0.0325 (5)
H6−0.05880.5175−0.38400.039*
C70.1495 (3)0.54479 (13)−0.1478 (2)0.0303 (5)
H70.11830.5850−0.20460.036*
C8−0.0093 (4)0.21497 (13)−0.1699 (3)0.0433 (6)
H8A−0.14600.2180−0.21280.065*
H8B0.01280.1776−0.10240.065*
H8C0.06080.2032−0.23530.065*
C90.4324 (3)0.63695 (12)0.1444 (2)0.0281 (5)
C100.5065 (3)0.70331 (13)0.2015 (3)0.0340 (5)
H100.49360.74560.14990.041*
C110.5983 (4)0.70499 (14)0.3345 (3)0.0388 (6)
H110.64960.74840.37600.047*
C120.6133 (4)0.64061 (15)0.4060 (3)0.0393 (6)
H120.67220.64060.49740.047*
C130.5419 (3)0.57673 (14)0.3432 (2)0.0338 (5)
H130.55690.53370.39290.041*
C140.3226 (4)0.63242 (12)0.0026 (2)0.0325 (5)
H14A0.21040.6646−0.01330.039*
H14B0.40450.6481−0.05430.039*
U11U22U33U12U13U23
Zn10.03695 (18)0.02365 (17)0.02486 (17)0.00029 (10)0.00615 (12)0.00196 (10)
Cl10.0635 (4)0.0280 (3)0.0268 (3)0.0019 (3)0.0049 (3)0.0074 (2)
O10.0444 (9)0.0229 (8)0.0246 (8)−0.0019 (7)−0.0010 (7)0.0024 (6)
O20.0494 (10)0.0228 (8)0.0374 (9)−0.0037 (7)−0.0017 (8)−0.0012 (7)
N10.0300 (9)0.0251 (9)0.0270 (9)0.0010 (7)0.0082 (8)0.0000 (8)
N20.0343 (10)0.0211 (9)0.0271 (9)0.0011 (8)0.0073 (8)0.0032 (7)
C10.0271 (11)0.0309 (12)0.0257 (11)0.0035 (9)0.0051 (9)0.0031 (9)
C20.0238 (10)0.0285 (11)0.0263 (11)0.0013 (9)0.0051 (8)−0.0008 (9)
C30.0291 (11)0.0269 (11)0.0322 (12)0.0013 (9)0.0076 (9)−0.0007 (9)
C40.0316 (12)0.0368 (13)0.0306 (12)−0.0017 (10)0.0057 (10)−0.0078 (10)
C50.0311 (12)0.0480 (15)0.0250 (12)0.0023 (11)0.0022 (9)−0.0006 (10)
C60.0336 (12)0.0365 (13)0.0256 (11)0.0040 (10)0.0043 (10)0.0052 (10)
C70.0356 (12)0.0272 (12)0.0273 (11)0.0044 (9)0.0069 (9)0.0067 (10)
C80.0450 (15)0.0260 (12)0.0523 (16)−0.0036 (10)0.0002 (12)−0.0053 (11)
C90.0294 (11)0.0247 (11)0.0322 (12)0.0003 (9)0.0119 (9)−0.0015 (9)
C100.0365 (12)0.0254 (11)0.0415 (13)−0.0019 (10)0.0128 (10)−0.0028 (10)
C110.0344 (12)0.0363 (13)0.0463 (14)−0.0088 (11)0.0116 (11)−0.0129 (12)
C120.0348 (12)0.0480 (15)0.0338 (13)−0.0062 (11)0.0062 (10)−0.0084 (11)
C130.0354 (12)0.0358 (12)0.0286 (12)−0.0022 (10)0.0052 (10)0.0017 (10)
C140.0490 (14)0.0183 (10)0.0304 (12)0.0009 (9)0.0106 (10)0.0022 (9)
Zn1—O11.9059 (16)C5—C61.360 (4)
Zn1—N21.9288 (18)C5—H50.9300
Zn1—N12.0112 (19)C6—H60.9300
Zn1—Cl12.2373 (6)C7—H70.9300
O1—C21.289 (3)C8—H8A0.9600
O2—C31.366 (3)C8—H8B0.9600
O2—C81.425 (3)C8—H8C0.9600
N1—C131.333 (3)C9—C101.391 (3)
N1—C91.337 (3)C9—C141.475 (3)
N2—C71.277 (3)C10—C111.362 (4)
N2—C141.470 (3)C10—H100.9300
C1—C61.406 (3)C11—C121.378 (4)
C1—C21.412 (3)C11—H110.9300
C1—C71.423 (3)C12—C131.368 (4)
C2—C31.429 (3)C12—H120.9300
C3—C41.363 (3)C13—H130.9300
C4—C51.396 (4)C14—H14A0.9700
C4—H40.9300C14—H14B0.9700
Cg1···Cg2i3.566 (4)Cg1···Cg2ii3.767 (7)
O1—Zn1—N293.32 (7)C1—C6—H6120.0
O1—Zn1—N1174.02 (7)N2—C7—C1126.3 (2)
N2—Zn1—N181.01 (8)N2—C7—H7116.9
O1—Zn1—Cl188.94 (5)C1—C7—H7116.9
N2—Zn1—Cl1173.99 (6)O2—C8—H8A109.5
N1—Zn1—Cl196.89 (6)O2—C8—H8B109.5
C2—O1—Zn1127.63 (14)H8A—C8—H8B109.5
C3—O2—C8117.96 (19)O2—C8—H8C109.5
C13—N1—C9117.5 (2)H8A—C8—H8C109.5
C13—N1—Zn1126.18 (16)H8B—C8—H8C109.5
C9—N1—Zn1116.30 (15)N1—C9—C10123.1 (2)
C7—N2—C14117.25 (19)N1—C9—C14115.78 (19)
C7—N2—Zn1125.56 (16)C10—C9—C14121.1 (2)
C14—N2—Zn1117.11 (14)C11—C10—C9118.6 (2)
C6—C1—C2120.3 (2)C11—C10—H10120.7
C6—C1—C7117.0 (2)C9—C10—H10120.7
C2—C1—C7122.7 (2)C10—C11—C12118.2 (2)
O1—C2—C1124.4 (2)C10—C11—H11120.9
O1—C2—C3118.0 (2)C12—C11—H11120.9
C1—C2—C3117.6 (2)C13—C12—C11120.4 (2)
C4—C3—O2124.1 (2)C13—C12—H12119.8
C4—C3—C2120.8 (2)C11—C12—H12119.8
O2—C3—C2115.12 (19)N1—C13—C12122.2 (2)
C3—C4—C5120.4 (2)N1—C13—H13118.9
C3—C4—H4119.8C12—C13—H13118.9
C5—C4—H4119.8N2—C14—C9109.77 (18)
C6—C5—C4120.9 (2)N2—C14—H14A109.7
C6—C5—H5119.5C9—C14—H14A109.7
C4—C5—H5119.5N2—C14—H14B109.7
C5—C6—C1120.1 (2)C9—C14—H14B109.7
C5—C6—H6120.0H14A—C14—H14B108.2
Zn1—O11.9059 (16)
Zn1—N21.9288 (18)
Zn1—N12.0112 (19)
Zn1—Cl12.2373 (6)
Cg1⋯Cg2i3.566 (4)
Cg1⋯Cg2ii3.767 (7)

Symmetry codes: (i) ; (ii) . Cg1 and Cg2 are centroids of atoms C1–C6 and N1/C9–C13, respectively.

  3 in total

1.  Synthesis and characterization of cobalt(II), nickel(II), copper(II) and zinc(II) complexes with Schiff base derived from 4-amino-3-mercapto-6-methyl-5-oxo-1,2,4-triazine.

Authors:  Kiran Singh; Manjeet Singh Barwa; Parikshit Tyagi
Journal:  Eur J Med Chem       Date:  2007-01-16       Impact factor: 6.514

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  catena-Poly[[[4-bromo-2-(2-pyridylmethyliminomethyl)phenolato]zinc(II)]-mu-chloro].

Authors:  Zhong-Lu You
Journal:  Acta Crystallogr C       Date:  2005-09-30       Impact factor: 1.172

  3 in total
  1 in total

1.  Two different coordination modes of the Schiff base derived from ortho-vanillin and 2-(2-aminomethyl)pyridine in a mononuclear uranyl complex.

Authors:  Sokratis T Tsantis; Zoi G Lada; Demetrios I Tzimopoulos; Vlasoula Bekiari; Vassilis Psycharis; Catherine P Raptopoulou; Spyros P Perlepes
Journal:  Heliyon       Date:  2022-06-11
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.