Literature DB >> 21578049

Aqua{5,5'-dimethoxy-2,2-[ethane-1,2-diylbis(nitrilomethylidyne)]diphenolato}nickel(II).

Chunbao Tang1.   

Abstract

The title mononuclear nickel(II) complex, [Ni(C(18)H(18)N(2)O(4))(H(2)O)], possesses crystallographic mirror symmetry. The Ni atom is five-coordinated in a square-pyramidal geometry, with two imine N and two phenolate O atoms of the Schiff base ligand in the square plane, and the water O atom in the axial position. In the crystal, the mol-ecules are linked via inter-molecular O-H⋯O hydrogen bonds, forming chains along the a axis.

Entities:  

Year:  2009        PMID: 21578049      PMCID: PMC2971105          DOI: 10.1107/S1600536809039129

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Angulo et al. (2001 ▶); Dey et al. (2004 ▶); Edison et al. (2004 ▶); Ramadevi et al. (2005 ▶); Suh et al. (1996 ▶); Tang (2009 ▶).

Experimental

Crystal data

[Ni(C18H18N2O4)(H2O)] M = 403.07 Orthorhombic, a = 8.7698 (3) Å b = 27.0608 (9) Å c = 7.4731 (2) Å V = 1773.5 (1) Å3 Z = 4 Mo Kα radiation μ = 1.13 mm−1 T = 298 K 0.18 × 0.17 × 0.17 mm

Data collection

Bruker SMART CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.823, T max = 0.832 9937 measured reflections 1978 independent reflections 1762 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.085 S = 1.04 1978 reflections 125 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.39 e Å−3 Δρmin = −0.46 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809039129/sj2661sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809039129/sj2661Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C18H18N2O4)(H2O)]F(000) = 840
Mr = 403.07Dx = 1.510 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 4326 reflections
a = 8.7698 (3) Åθ = 2.3–29.2°
b = 27.0608 (9) ŵ = 1.13 mm1
c = 7.4731 (2) ÅT = 298 K
V = 1773.5 (1) Å3Block, green
Z = 40.18 × 0.17 × 0.17 mm
Bruker SMART CCD area detector diffractometer1978 independent reflections
Radiation source: fine-focus sealed tube1762 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scansθmax = 27.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→11
Tmin = 0.823, Tmax = 0.832k = −34→32
9937 measured reflectionsl = −9→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0327P)2 + 1.6368P] where P = (Fo2 + 2Fc2)/3
1978 reflections(Δ/σ)max = 0.001
125 parametersΔρmax = 0.39 e Å3
1 restraintΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.04557 (4)0.25001.04045 (5)0.03460 (13)
N10.1893 (2)0.29806 (9)0.9426 (3)0.0540 (5)
O1−0.10331 (18)0.30124 (6)1.0871 (2)0.0459 (4)
O2−0.3611 (2)0.45495 (6)1.0277 (2)0.0558 (5)
O30.1380 (3)0.25001.3276 (3)0.0467 (5)
C10.0251 (3)0.36946 (9)0.9443 (3)0.0425 (5)
C2−0.1014 (3)0.34714 (8)1.0324 (3)0.0379 (5)
C3−0.2323 (3)0.37628 (8)1.0615 (3)0.0412 (5)
H3A−0.31600.36251.11970.049*
C4−0.2387 (3)0.42474 (9)1.0054 (3)0.0440 (5)
C5−0.1154 (3)0.44666 (9)0.9178 (3)0.0535 (6)
H5−0.12040.47930.87910.064*
C60.0129 (3)0.41896 (9)0.8904 (3)0.0519 (6)
H60.09580.43360.83360.062*
C70.1637 (3)0.34352 (10)0.9075 (3)0.0501 (6)
H70.24180.36130.85320.060*
C80.3344 (3)0.27498 (13)0.8944 (7)0.1204 (18)
H8A0.36330.28630.77600.144*
H8B0.41190.28630.97740.144*
C9−0.4961 (3)0.43441 (10)1.1044 (4)0.0623 (7)
H9A−0.53060.40731.03210.093*
H9B−0.57400.45931.10960.093*
H9C−0.47430.42281.22310.093*
H30.194 (3)0.2744 (7)1.355 (4)0.080*
U11U22U33U12U13U23
Ni10.02532 (19)0.0415 (2)0.0369 (2)0.0000.00467 (15)0.000
N10.0328 (10)0.0682 (14)0.0611 (13)−0.0012 (9)0.0092 (9)0.0186 (11)
O10.0374 (8)0.0394 (8)0.0610 (10)−0.0007 (7)0.0115 (7)0.0110 (7)
O20.0664 (11)0.0380 (9)0.0631 (11)0.0067 (8)0.0063 (9)0.0083 (8)
O30.0341 (12)0.0514 (14)0.0545 (14)0.000−0.0101 (11)0.000
C10.0450 (12)0.0462 (12)0.0363 (11)−0.0125 (10)0.0011 (9)0.0016 (10)
C20.0390 (11)0.0389 (11)0.0360 (10)−0.0064 (9)−0.0016 (9)0.0025 (9)
C30.0421 (12)0.0373 (11)0.0443 (12)−0.0050 (9)0.0034 (10)0.0022 (9)
C40.0555 (14)0.0387 (12)0.0378 (11)−0.0029 (10)−0.0022 (10)0.0006 (9)
C50.0708 (17)0.0381 (12)0.0518 (14)−0.0100 (12)0.0048 (13)0.0077 (11)
C60.0578 (15)0.0502 (14)0.0478 (13)−0.0181 (12)0.0072 (12)0.0067 (11)
C70.0397 (12)0.0629 (16)0.0478 (13)−0.0120 (11)0.0051 (10)0.0133 (12)
C80.0448 (16)0.104 (3)0.212 (5)0.0225 (16)0.056 (2)0.079 (3)
C90.0617 (16)0.0539 (15)0.0713 (18)0.0134 (13)0.0116 (15)0.0120 (14)
Ni1—O1i1.9363 (16)C2—C31.410 (3)
Ni1—O11.9363 (16)C3—C41.378 (3)
Ni1—N1i1.953 (2)C3—H3A0.9300
Ni1—N11.953 (2)C4—C51.396 (3)
Ni1—O32.294 (2)C5—C61.367 (4)
N1—C71.278 (3)C5—H50.9300
N1—C81.463 (3)C6—H60.9300
O1—C21.308 (3)C7—H70.9300
O2—C41.359 (3)C8—C8i1.352 (7)
O2—C91.428 (3)C8—H8A0.9700
O3—H30.847 (10)C8—H8B0.9700
C1—C61.403 (3)C9—H9A0.9600
C1—C21.424 (3)C9—H9B0.9600
C1—C71.430 (3)C9—H9C0.9600
O1i—Ni1—O191.47 (9)O2—C4—C3124.6 (2)
O1i—Ni1—N1i91.48 (8)O2—C4—C5114.4 (2)
O1—Ni1—N1i168.38 (9)C3—C4—C5121.0 (2)
O1i—Ni1—N1168.38 (9)C6—C5—C4118.3 (2)
O1—Ni1—N191.48 (8)C6—C5—H5120.8
N1i—Ni1—N183.49 (13)C4—C5—H5120.8
O1i—Ni1—O394.00 (7)C5—C6—C1122.9 (2)
O1—Ni1—O394.00 (7)C5—C6—H6118.6
N1i—Ni1—O397.00 (8)C1—C6—H6118.6
N1—Ni1—O397.00 (8)N1—C7—C1125.6 (2)
C7—N1—C8120.9 (2)N1—C7—H7117.2
C7—N1—Ni1127.17 (17)C1—C7—H7117.2
C8—N1—Ni1111.69 (19)C8i—C8—N1115.27 (16)
C2—O1—Ni1127.95 (14)C8i—C8—H8A108.5
C4—O2—C9118.01 (19)N1—C8—H8A108.5
Ni1—O3—H3115 (2)C8i—C8—H8B108.5
C6—C1—C2118.6 (2)N1—C8—H8B108.5
C6—C1—C7118.6 (2)H8A—C8—H8B107.5
C2—C1—C7122.8 (2)O2—C9—H9A109.5
O1—C2—C3118.17 (19)O2—C9—H9B109.5
O1—C2—C1123.9 (2)H9A—C9—H9B109.5
C3—C2—C1117.9 (2)O2—C9—H9C109.5
C4—C3—C2121.2 (2)H9A—C9—H9C109.5
C4—C3—H3A119.4H9B—C9—H9C109.5
C2—C3—H3A119.4
D—H···AD—HH···AD···AD—H···A
O3—H3···O1ii0.85 (1)1.97 (2)2.734 (2)150 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O1i0.847 (10)1.969 (17)2.734 (2)150 (3)

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Autoionization of homogeneous nickel(II) diphosphane hydrogenation catalysts. An NMR study and crystal structures of [Ni(o-MeO-dppe)I2] and [Ni(o-MeO-dppe)I2](PF6)2.

Authors:  I M Angulo; E Bouwman; M Lutz; W P Mul; A L Spek
Journal:  Inorg Chem       Date:  2001-04-23       Impact factor: 5.165

3.  Crystal structure and magnetic interactions in nickel(II) dibridged complexes formed by two azide groups or by both phenolate oxygen-azide, -thiocyanate, -carboxylate, or -cyanate groups.

Authors:  Subrata Kumar Dey; Nijhuma Mondal; M Salah El Fallah; Ramon Vicente; Albert Escuer; Xavier Solans; M Font-Bardía; T Matsushita; V Gramlich; Samiran Mitra
Journal:  Inorg Chem       Date:  2004-04-05       Impact factor: 5.165

4.  {2,2'-[Cyclo-hexane-1,2-diylbis(nitrilo-methyl-idyne)]diphenolato}nickel(II).

Authors:  Chunbao Tang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-25
  4 in total

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