Literature DB >> 21577997

1-(3-Phenyl-prop-yl)urea.

Yang Li1, Guoxiong Hua, Alexandra M Z Slawin, J Derek Woollins.   

Abstract

In the crystal of the title compound, C(10)H(14)N(2)O, double supra-molecular layers of PhCH(2)CH(2)CH(2)NHC(O)NH(2) are formed parallel to the bc plane by inter-molecular N-H⋯O hydrogen bonding, with R(2) (2)(8) and R(2) (1)(6) motifs in the b- and c-axis directions, respectively. The mean plane of the C(ar)-C-C group makes a dihedral angle of 84.8 (2)° with the benzene ring.

Entities:  

Year:  2009        PMID: 21577997      PMCID: PMC2970179          DOI: 10.1107/S1600536809038501

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structural information see Bernstein et al. (1995 ▶). For background chemistry, see: Gray et al. (2005 ▶); Hua & Woollins (2009 ▶); Renodon-Cornière et al. (2002 ▶).

Experimental

Crystal data

C10H14N2O M = 178.23 Monoclinic, a = 17.002 (4) Å b = 6.4953 (15) Å c = 9.171 (2) Å β = 91.401 (8)° V = 1012.5 (4) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 93 K 0.25 × 0.04 × 0.03 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2004 ▶) T min = 0.981, T max = 0.998 6696 measured reflections 2126 independent reflections 1360 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.144 S = 1.03 2126 reflections 122 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CrystalClear (Rigaku, 2004 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809038501/bt5070sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809038501/bt5070Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H14N2OF(000) = 384
Mr = 178.23Dx = 1.169 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 17.002 (4) ÅCell parameters from 2697 reflections
b = 6.4953 (15) Åθ = 2.4–28.1°
c = 9.171 (2) ŵ = 0.08 mm1
β = 91.401 (8)°T = 93 K
V = 1012.5 (4) Å3Platelet, colorless
Z = 40.25 × 0.04 × 0.03 mm
Rigaku Mercury CCD diffractometer2126 independent reflections
Radiation source: rotating anode1360 reflections with I > 2σ(I)
confocalRint = 0.038
Detector resolution: 0.83 pixels mm-1θmax = 28.5°, θmin = 3.4°
ω scansh = −16→20
Absorption correction: multi-scan (CrystalClear; Rigaku, 2004)k = −8→7
Tmin = 0.981, Tmax = 0.998l = −9→11
6696 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.056H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.144w = 1/[σ2(Fo2) + (0.0607P)2] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2126 reflectionsΔρmax = 0.23 e Å3
122 parametersΔρmin = −0.20 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.030 (5)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.56839 (7)1.2854 (2)0.55596 (11)0.0367 (4)
N20.61033 (9)1.1114 (2)0.35832 (16)0.0321 (4)
C50.81085 (11)0.5672 (3)0.32854 (16)0.0325 (5)
N10.54532 (10)1.4186 (3)0.33030 (14)0.0401 (5)
H1A0.52191.52740.36650.048*
H1B0.54991.40600.23530.048*
C20.64786 (11)0.9469 (3)0.44128 (17)0.0342 (5)
H2A0.60750.84900.47490.041*
H2B0.67561.00480.52820.041*
C100.79059 (12)0.3888 (3)0.25485 (18)0.0396 (5)
H100.74130.32580.27210.047*
C60.88327 (12)0.6552 (3)0.3003 (2)0.0451 (6)
H60.89870.77770.34970.054*
C30.70581 (11)0.8358 (3)0.34725 (18)0.0338 (5)
H3A0.74250.93780.30630.041*
H3B0.67680.77030.26460.041*
C40.75349 (11)0.6713 (3)0.42853 (18)0.0354 (5)
H4A0.78280.73530.51140.042*
H4B0.71740.56710.46840.042*
C90.84088 (13)0.3000 (3)0.1561 (2)0.0457 (6)
H90.82590.17650.10740.055*
C80.91183 (13)0.3890 (4)0.1284 (2)0.0475 (6)
H80.94590.32880.05980.057*
C70.93348 (13)0.5670 (4)0.2009 (2)0.0533 (6)
H70.98280.62940.18280.064*
C10.57407 (10)1.2717 (3)0.42002 (17)0.0305 (5)
H20.6095 (11)1.110 (3)0.264 (2)0.037*
U11U22U33U12U13U23
O10.0480 (9)0.0409 (8)0.0211 (7)0.0078 (6)0.0029 (5)−0.0016 (5)
N20.0408 (10)0.0356 (9)0.0199 (8)0.0082 (7)0.0011 (6)−0.0016 (6)
C50.0355 (11)0.0340 (11)0.0280 (9)0.0034 (8)0.0013 (7)0.0026 (7)
N10.0575 (12)0.0397 (10)0.0232 (8)0.0145 (8)0.0041 (7)−0.0004 (6)
C20.0405 (12)0.0357 (11)0.0264 (9)0.0050 (8)0.0023 (7)0.0009 (7)
C100.0426 (13)0.0348 (11)0.0415 (11)−0.0006 (9)0.0055 (8)−0.0006 (8)
C60.0402 (13)0.0472 (13)0.0480 (12)−0.0050 (10)0.0030 (9)−0.0113 (9)
C30.0385 (12)0.0351 (11)0.0281 (10)0.0043 (8)0.0043 (7)−0.0005 (7)
C40.0397 (12)0.0363 (11)0.0303 (10)0.0037 (8)0.0008 (8)0.0013 (7)
C90.0541 (14)0.0392 (12)0.0440 (12)0.0029 (10)0.0029 (9)−0.0079 (9)
C80.0447 (14)0.0572 (15)0.0408 (12)0.0130 (11)0.0071 (9)−0.0058 (10)
C70.0388 (13)0.0659 (16)0.0557 (13)−0.0033 (11)0.0092 (10)−0.0079 (11)
C10.0327 (11)0.0361 (11)0.0228 (10)0.0010 (8)0.0022 (7)0.0001 (7)
O1—C11.2559 (18)C10—H100.9500
N2—C11.342 (2)C6—C71.387 (3)
N2—C21.450 (2)C6—H60.9500
N2—H20.863 (18)C3—C41.525 (2)
C5—C101.380 (3)C3—H3A0.9900
C5—C61.388 (3)C3—H3B0.9900
C5—C41.514 (3)C4—H4A0.9900
N1—C11.344 (2)C4—H4B0.9900
N1—H1A0.8800C9—C81.367 (3)
N1—H1B0.8800C9—H90.9500
C2—C31.509 (2)C8—C71.379 (3)
C2—H2A0.9900C8—H80.9500
C2—H2B0.9900C7—H70.9500
C10—C91.386 (3)
C1—N2—C2123.43 (14)C4—C3—H3A108.8
C1—N2—H2115.5 (12)C2—C3—H3B108.8
C2—N2—H2121.1 (12)C4—C3—H3B108.8
C10—C5—C6117.78 (17)H3A—C3—H3B107.7
C10—C5—C4120.97 (17)C5—C4—C3111.07 (14)
C6—C5—C4121.11 (17)C5—C4—H4A109.4
C1—N1—H1A120.0C3—C4—H4A109.4
C1—N1—H1B120.0C5—C4—H4B109.4
H1A—N1—H1B120.0C3—C4—H4B109.4
N2—C2—C3109.73 (13)H4A—C4—H4B108.0
N2—C2—H2A109.7C8—C9—C10120.42 (19)
C3—C2—H2A109.7C8—C9—H9119.8
N2—C2—H2B109.7C10—C9—H9119.8
C3—C2—H2B109.7C9—C8—C7119.43 (18)
H2A—C2—H2B108.2C9—C8—H8120.3
C5—C10—C9121.23 (19)C7—C8—H8120.3
C5—C10—H10119.4C8—C7—C6120.1 (2)
C9—C10—H10119.4C8—C7—H7120.0
C7—C6—C5121.1 (2)C6—C7—H7120.0
C7—C6—H6119.5O1—C1—N2121.38 (15)
C5—C6—H6119.5O1—C1—N1121.44 (16)
C2—C3—C4113.74 (14)N2—C1—N1117.17 (14)
C2—C3—H3A108.8
C1—N2—C2—C3−160.22 (17)C2—C3—C4—C5−179.52 (16)
C6—C5—C10—C90.2 (3)C5—C10—C9—C8−0.6 (3)
C4—C5—C10—C9175.84 (17)C10—C9—C8—C70.8 (3)
C10—C5—C6—C70.2 (3)C9—C8—C7—C6−0.4 (3)
C4—C5—C6—C7−175.50 (18)C5—C6—C7—C80.0 (3)
N2—C2—C3—C4175.12 (15)C2—N2—C1—O1−2.2 (3)
C10—C5—C4—C3−92.9 (2)C2—N2—C1—N1176.63 (16)
C6—C5—C4—C382.7 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.882.102.936 (2)159
N1—H1B···O1ii0.882.092.8788 (19)148
N2—H2···O1ii0.863 (18)2.127 (19)2.9240 (19)153.2 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.882.102.936 (2)159
N1—H1B⋯O1ii0.882.092.8788 (19)148
N2—H2⋯O1ii0.863 (18)2.127 (19)2.9240 (19)153.2 (17)

Symmetry codes: (i) ; (ii) .

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