Literature DB >> 21577988

3-(4-Fluoro-phen-yl)-2-(4-pyrid-yl)pyrido[2,3-b]pyrazine.

Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the crystal structure of the title compound, C(18)H(11)FN(4), the pyridopyrazine ring makes dihedral angles of 34.67 (7) and 52.24 (7)° with the 4-fluoro-phenyl and pyridine rings, respectively. The 4-fluoro-phenyl ring makes a dihedral angle of 59.56 (9)° with the pyridine ring.

Entities:  

Year:  2009        PMID: 21577988      PMCID: PMC2970414          DOI: 10.1107/S1600536809037970

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For preparation of pyridopyrazines under microwave conditions, see: Zhao et al. (2004 ▶).

Experimental

Crystal data

C18H11FN4 M = 302.31 Monoclinic, a = 9.7163 (9) Å b = 13.7937 (6) Å c = 10.8164 (10) Å β = 90.994 (5)° V = 1449.4 (2) Å3 Z = 4 Cu Kα radiation μ = 0.78 mm−1 T = 193 K 0.30 × 0.25 × 0.22 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 2906 measured reflections 2753 independent reflections 2654 reflections with I > 2σ(I) R int = 0.023 3 standard reflections frequency: 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.149 S = 1.20 2753 reflections 209 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809037970/bt5066sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809037970/bt5066Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H11FN4F(000) = 624
Mr = 302.31Dx = 1.385 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 9.7163 (9) Åθ = 65–69°
b = 13.7937 (6) ŵ = 0.78 mm1
c = 10.8164 (10) ÅT = 193 K
β = 90.994 (5)°Block, colourless
V = 1449.4 (2) Å30.30 × 0.25 × 0.22 mm
Z = 4
Enraf–Nonius CAD-4 diffractometerRint = 0.023
Radiation source: rotating anodeθmax = 70.0°, θmin = 4.6°
graphiteh = −11→11
ω/2θ scansk = 0→16
2906 measured reflectionsl = 0→13
2753 independent reflections3 standard reflections every 60 min
2654 reflections with I > 2σ(I) intensity decay: 2%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.149w = 1/[σ2(Fo2) + (0.073P)2 + 0.6448P] where P = (Fo2 + 2Fc2)/3
S = 1.20(Δ/σ)max < 0.001
2753 reflectionsΔρmax = 0.31 e Å3
209 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0079 (9)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.71724 (16)0.38396 (12)0.46833 (15)0.0271 (4)
N20.82823 (14)0.41887 (10)0.52355 (13)0.0300 (4)
C30.81675 (18)0.44950 (12)0.64285 (16)0.0294 (4)
C40.9322 (2)0.48632 (15)0.70813 (17)0.0383 (4)
H41.02030.48800.67150.046*
C50.9135 (2)0.51935 (15)0.82524 (18)0.0430 (5)
H50.98920.54360.87270.052*
C60.7806 (2)0.51712 (15)0.87511 (18)0.0422 (5)
H60.76980.54250.95600.051*
N70.67047 (17)0.48270 (12)0.81831 (14)0.0385 (4)
C80.68851 (18)0.44723 (12)0.70263 (15)0.0289 (4)
N90.57616 (14)0.40774 (11)0.64607 (13)0.0297 (4)
C100.58915 (16)0.37376 (11)0.53266 (15)0.0263 (4)
C110.73166 (16)0.36165 (12)0.33454 (15)0.0277 (4)
C120.64457 (18)0.40275 (13)0.24579 (16)0.0324 (4)
H120.57010.44290.26950.039*
C130.6681 (2)0.38414 (14)0.12271 (17)0.0377 (4)
H130.60820.41290.06290.045*
N140.77022 (17)0.32808 (12)0.08247 (15)0.0406 (4)
C150.85276 (19)0.28932 (14)0.16925 (18)0.0370 (4)
H150.92630.24940.14280.044*
C160.83866 (17)0.30326 (13)0.29441 (17)0.0322 (4)
H160.90050.27370.35200.039*
C170.46722 (16)0.32309 (12)0.47894 (15)0.0270 (4)
C180.48092 (17)0.24153 (13)0.40375 (16)0.0307 (4)
H180.57020.21940.38300.037*
C190.36587 (19)0.19234 (14)0.35891 (18)0.0363 (4)
H190.37500.13630.30860.044*
C200.23859 (18)0.22707 (15)0.3895 (2)0.0405 (5)
C210.21958 (18)0.30696 (14)0.4637 (2)0.0404 (5)
H210.12980.32890.48310.049*
C220.33549 (17)0.35415 (13)0.50905 (17)0.0329 (4)
H220.32510.40870.56170.039*
F230.12564 (12)0.17883 (11)0.34584 (16)0.0658 (5)
U11U22U33U12U13U23
C10.0255 (8)0.0238 (8)0.0320 (9)0.0011 (6)−0.0009 (6)0.0019 (6)
N20.0273 (7)0.0305 (7)0.0322 (7)−0.0026 (6)0.0003 (6)0.0008 (6)
C30.0308 (9)0.0265 (8)0.0307 (8)−0.0022 (6)−0.0022 (7)0.0029 (6)
C40.0338 (9)0.0418 (10)0.0390 (10)−0.0094 (8)−0.0035 (7)0.0022 (8)
C50.0460 (11)0.0450 (11)0.0375 (10)−0.0158 (9)−0.0105 (8)0.0024 (8)
C60.0540 (12)0.0420 (11)0.0304 (9)−0.0102 (9)−0.0038 (8)−0.0039 (8)
N70.0420 (9)0.0417 (9)0.0320 (8)−0.0044 (7)0.0009 (6)−0.0040 (6)
C80.0314 (8)0.0258 (8)0.0295 (8)−0.0006 (6)−0.0011 (6)0.0018 (6)
N90.0283 (7)0.0307 (8)0.0303 (7)−0.0004 (6)0.0007 (5)−0.0001 (6)
C100.0263 (8)0.0236 (8)0.0290 (8)0.0019 (6)−0.0001 (6)0.0008 (6)
C110.0243 (8)0.0273 (8)0.0315 (9)−0.0045 (6)0.0026 (6)−0.0010 (6)
C120.0319 (9)0.0315 (9)0.0338 (9)0.0008 (7)0.0023 (7)0.0009 (7)
C130.0413 (10)0.0387 (10)0.0329 (9)−0.0040 (8)−0.0023 (7)0.0012 (7)
N140.0454 (9)0.0425 (9)0.0341 (8)−0.0067 (7)0.0062 (7)−0.0070 (7)
C150.0324 (9)0.0349 (9)0.0441 (10)−0.0043 (7)0.0090 (8)−0.0096 (8)
C160.0254 (8)0.0327 (9)0.0384 (9)−0.0022 (7)0.0012 (7)−0.0041 (7)
C170.0246 (8)0.0279 (8)0.0283 (8)−0.0010 (6)0.0000 (6)0.0035 (6)
C180.0251 (8)0.0315 (9)0.0356 (9)−0.0002 (7)0.0010 (6)−0.0007 (7)
C190.0341 (9)0.0330 (9)0.0418 (10)−0.0029 (7)−0.0028 (7)−0.0063 (7)
C200.0263 (9)0.0387 (10)0.0561 (12)−0.0063 (7)−0.0085 (8)−0.0023 (9)
C210.0235 (9)0.0386 (10)0.0593 (12)0.0021 (7)0.0004 (8)−0.0008 (9)
C220.0285 (9)0.0295 (9)0.0407 (9)0.0020 (7)0.0024 (7)−0.0014 (7)
F230.0305 (6)0.0594 (9)0.1070 (12)−0.0084 (6)−0.0157 (7)−0.0256 (8)
C1—N21.315 (2)C12—H120.9500
C1—C101.443 (2)C13—N141.336 (3)
C1—C111.488 (2)C13—H130.9500
N2—C31.364 (2)N14—C151.336 (3)
C3—C41.410 (2)C15—C161.377 (3)
C3—C81.414 (2)C15—H150.9500
C4—C51.361 (3)C16—H160.9500
C4—H40.9500C17—C221.394 (2)
C5—C61.409 (3)C17—C181.396 (2)
C5—H50.9500C18—C191.388 (2)
C6—N71.313 (2)C18—H180.9500
C6—H60.9500C19—C201.372 (3)
N7—C81.358 (2)C19—H190.9500
C8—N91.356 (2)C20—F231.361 (2)
N9—C101.321 (2)C20—C211.378 (3)
C10—C171.485 (2)C21—C221.383 (3)
C11—C121.389 (2)C21—H210.9500
C11—C161.391 (2)C22—H220.9500
C12—C131.379 (3)
N2—C1—C10121.60 (15)C11—C12—H12120.6
N2—C1—C11115.28 (14)N14—C13—C12123.97 (18)
C10—C1—C11123.03 (14)N14—C13—H13118.0
C1—N2—C3117.59 (14)C12—C13—H13118.0
N2—C3—C4120.53 (16)C15—N14—C13116.28 (16)
N2—C3—C8120.86 (15)N14—C15—C16124.50 (17)
C4—C3—C8118.60 (16)N14—C15—H15117.7
C5—C4—C3117.99 (17)C16—C15—H15117.7
C5—C4—H4121.0C15—C16—C11118.40 (17)
C3—C4—H4121.0C15—C16—H16120.8
C4—C5—C6119.12 (17)C11—C16—H16120.8
C4—C5—H5120.4C22—C17—C18118.76 (15)
C6—C5—H5120.4C22—C17—C10119.57 (15)
N7—C6—C5125.01 (18)C18—C17—C10121.58 (15)
N7—C6—H6117.5C19—C18—C17120.87 (16)
C5—C6—H6117.5C19—C18—H18119.6
C6—N7—C8116.37 (16)C17—C18—H18119.6
N9—C8—N7116.40 (15)C20—C19—C18117.97 (17)
N9—C8—C3120.75 (15)C20—C19—H19121.0
N7—C8—C3122.84 (16)C18—C19—H19121.0
C10—N9—C8118.18 (14)F23—C20—C19118.07 (18)
N9—C10—C1120.67 (15)F23—C20—C21118.54 (17)
N9—C10—C17116.22 (14)C19—C20—C21123.38 (17)
C1—C10—C17123.09 (14)C20—C21—C22117.80 (17)
C12—C11—C16118.06 (16)C20—C21—H21121.1
C12—C11—C1121.39 (15)C22—C21—H21121.1
C16—C11—C1120.45 (15)C21—C22—C17121.19 (17)
C13—C12—C11118.80 (17)C21—C22—H22119.4
C13—C12—H12120.6C17—C22—H22119.4
C10—C1—N2—C3−2.9 (2)N2—C1—C11—C1652.5 (2)
C11—C1—N2—C3173.66 (14)C10—C1—C11—C16−130.92 (17)
C1—N2—C3—C4179.03 (16)C16—C11—C12—C13−0.2 (2)
C1—N2—C3—C8−2.5 (2)C1—C11—C12—C13176.03 (16)
N2—C3—C4—C5177.47 (17)C11—C12—C13—N140.3 (3)
C8—C3—C4—C5−1.0 (3)C12—C13—N14—C15−0.3 (3)
C3—C4—C5—C6−1.2 (3)C13—N14—C15—C160.2 (3)
C4—C5—C6—N71.9 (3)N14—C15—C16—C11−0.1 (3)
C5—C6—N7—C8−0.2 (3)C12—C11—C16—C150.1 (2)
C6—N7—C8—N9177.15 (16)C1—C11—C16—C15−176.17 (15)
C6—N7—C8—C3−2.2 (3)N9—C10—C17—C2234.0 (2)
N2—C3—C8—N95.1 (2)C1—C10—C17—C22−147.77 (17)
C4—C3—C8—N9−176.46 (16)N9—C10—C17—C18−142.59 (16)
N2—C3—C8—N7−175.65 (16)C1—C10—C17—C1835.6 (2)
C4—C3—C8—N72.8 (3)C22—C17—C18—C190.4 (3)
N7—C8—N9—C10179.00 (15)C10—C17—C18—C19177.00 (16)
C3—C8—N9—C10−1.7 (2)C17—C18—C19—C200.8 (3)
C8—N9—C10—C1−3.8 (2)C18—C19—C20—F23−179.86 (17)
C8—N9—C10—C17174.53 (14)C18—C19—C20—C21−1.1 (3)
N2—C1—C10—N96.4 (2)F23—C20—C21—C22178.90 (18)
C11—C1—C10—N9−169.95 (15)C19—C20—C21—C220.1 (3)
N2—C1—C10—C17−171.78 (15)C20—C21—C22—C171.1 (3)
C11—C1—C10—C1711.9 (2)C18—C17—C22—C21−1.4 (3)
N2—C1—C11—C12−123.57 (17)C10—C17—C22—C21−178.07 (16)
C10—C1—C11—C1253.0 (2)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  1 in total

1.  Crystal structures of 2,3-bis-(thio-phen-2-yl)pyrido[2,3-b]pyrazine and 7-bromo-2,3-bis-(thio-phen-2-yl)pyrido[2,3-b]pyrazine.

Authors:  Rafal Popek; Guy Crundwell
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-01-01
  1 in total

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