Literature DB >> 21577959

2-(4-Fluoro-phen-yl)-3-(4-pyrid-yl)pyrido[2,3-b]pyrazine.

Pierre Koch, Dieter Schollmeyer, Stefan Laufer.   

Abstract

In the crystal structure of the title compound, C(18)H(11)FN(4), the pyridopyrazine system makes dihedral angles of 45.51 (7) and 44.75 (7)° with the attached 4-fluoro-phenyl ring and the pyridine ring, respectively. The 4-fluoro-phenyl ring makes a dihedral angle of 54.54 (8)° with the pyridine ring. The pyridine ring part of the pyridopyrazine ring and the pyrazine ring of two c-glide-plane-related mol-ecules form π-π inter-actions. The angle between the planes is 2.09 (7)° and the distance between the centroids is 3.557 (1)Å.

Entities:  

Year:  2009        PMID: 21577959      PMCID: PMC2970199          DOI: 10.1107/S1600536809037295

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For preparation of pyridopyrazines under microwave conditions, see: Zhao et al. (2004 ▶).

Experimental

Crystal data

C18H11FN4 M = 302.31 Monoclinic, a = 17.222 (9) Å b = 11.2199 (12) Å c = 7.329 (4) Å β = 91.80 (3)° V = 1415.4 (10) Å3 Z = 4 Cu Kα radiation μ = 0.80 mm−1 T = 193 K 0.64 × 0.51 × 0.06 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: numerical (CORINC; Dräger & Gattow, 1971 ▶) T min = 0.675, T max = 0.949 2766 measured reflections 2677 independent reflections 2309 reflections with I > 2σ(I) R int = 0.029 3 standard reflections frequency: 60 min intensity decay: 2%

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.134 S = 1.07 2677 reflections 209 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.24 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: CORINC (Dräger & Gattow, 1971 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809037295/nc2158sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809037295/nc2158Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H11FN4F(000) = 624
Mr = 302.31Dx = 1.419 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 17.222 (9) Åθ = 35–50°
b = 11.2199 (12) ŵ = 0.80 mm1
c = 7.329 (4) ÅT = 193 K
β = 91.80 (3)°Plate, yellow
V = 1415.4 (10) Å30.64 × 0.51 × 0.06 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer2309 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.029
graphiteθmax = 70.1°, θmin = 2.6°
ω/2θ scansh = 0→20
Absorption correction: numerical (CORINC; Dräger & Gattow, 1971)k = 0→13
Tmin = 0.675, Tmax = 0.949l = −8→8
2766 measured reflections3 standard reflections every 60 min
2677 independent reflections intensity decay: 2%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.134w = 1/[σ2(Fo2) + (0.0797P)2 + 0.3717P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2677 reflectionsΔρmax = 0.22 e Å3
209 parametersΔρmin = −0.24 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0012 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.30818 (9)0.56244 (13)0.5692 (2)0.0294 (4)
N20.37936 (8)0.58947 (12)0.62301 (19)0.0323 (3)
C30.39843 (9)0.70720 (14)0.6323 (2)0.0317 (4)
N40.47243 (8)0.73360 (13)0.6904 (2)0.0386 (4)
C50.48914 (10)0.84780 (17)0.7036 (2)0.0419 (4)
H50.54050.86830.74320.050*
C60.43761 (11)0.94200 (16)0.6641 (2)0.0409 (4)
H60.45391.02230.67950.049*
C70.36428 (10)0.91673 (14)0.6039 (2)0.0362 (4)
H70.32830.97860.57500.043*
C80.34280 (9)0.79530 (14)0.5851 (2)0.0307 (4)
N90.27022 (8)0.76613 (11)0.52296 (18)0.0312 (3)
C100.25245 (9)0.65216 (13)0.5120 (2)0.0291 (3)
C110.28858 (9)0.43306 (14)0.5734 (2)0.0315 (4)
C120.22105 (10)0.39077 (15)0.6474 (2)0.0386 (4)
H120.18370.44450.69300.046*
C130.20869 (11)0.26876 (16)0.6541 (3)0.0420 (4)
H130.16190.24120.70480.050*
N140.25842 (9)0.18762 (13)0.5938 (2)0.0435 (4)
C150.32369 (11)0.22990 (15)0.5235 (2)0.0402 (4)
H150.36020.17410.48010.048*
C160.34126 (10)0.34977 (14)0.5101 (2)0.0344 (4)
H160.38850.37490.45850.041*
C170.17368 (9)0.62393 (13)0.4370 (2)0.0293 (3)
C180.16111 (9)0.53902 (13)0.3005 (2)0.0333 (4)
H180.20360.49450.25710.040*
C190.08724 (10)0.51921 (15)0.2280 (3)0.0398 (4)
H190.07860.46140.13480.048*
C200.02664 (10)0.58435 (16)0.2928 (3)0.0410 (4)
C210.03648 (10)0.66822 (17)0.4283 (3)0.0446 (4)
H21−0.00660.71120.47240.054*
C220.11058 (10)0.68841 (15)0.4987 (2)0.0379 (4)
H220.11870.74720.59060.046*
F23−0.04531 (7)0.56622 (13)0.21986 (18)0.0642 (4)
U11U22U33U12U13U23
C10.0316 (8)0.0300 (8)0.0268 (8)0.0022 (6)0.0028 (6)0.0011 (6)
N20.0312 (7)0.0329 (7)0.0329 (7)0.0013 (5)0.0011 (5)0.0018 (5)
C30.0319 (8)0.0350 (8)0.0283 (8)−0.0016 (6)0.0036 (6)−0.0013 (6)
N40.0326 (7)0.0447 (8)0.0384 (8)−0.0024 (6)−0.0008 (6)−0.0001 (6)
C50.0346 (9)0.0514 (10)0.0397 (10)−0.0121 (7)0.0005 (7)−0.0046 (8)
C60.0436 (10)0.0399 (9)0.0396 (10)−0.0126 (7)0.0097 (8)−0.0075 (7)
C70.0384 (9)0.0304 (8)0.0403 (10)−0.0025 (6)0.0081 (7)−0.0029 (7)
C80.0312 (8)0.0312 (8)0.0299 (8)−0.0019 (6)0.0055 (6)−0.0026 (6)
N90.0317 (7)0.0280 (7)0.0342 (7)0.0007 (5)0.0031 (5)−0.0007 (5)
C100.0311 (8)0.0279 (7)0.0284 (8)0.0009 (6)0.0040 (6)0.0000 (6)
C110.0338 (8)0.0305 (8)0.0298 (8)0.0012 (6)−0.0030 (6)0.0046 (6)
C120.0367 (9)0.0374 (9)0.0418 (10)0.0034 (7)0.0020 (7)0.0084 (7)
C130.0401 (9)0.0421 (9)0.0435 (10)−0.0070 (7)−0.0002 (7)0.0115 (8)
N140.0523 (9)0.0337 (7)0.0443 (9)−0.0024 (6)−0.0008 (7)0.0060 (6)
C150.0499 (10)0.0308 (8)0.0399 (10)0.0044 (7)0.0016 (8)0.0018 (7)
C160.0366 (8)0.0330 (8)0.0334 (9)0.0014 (6)−0.0008 (6)0.0029 (6)
C170.0312 (8)0.0257 (7)0.0311 (8)0.0005 (6)0.0016 (6)0.0029 (6)
C180.0365 (8)0.0282 (7)0.0352 (9)0.0005 (6)0.0013 (7)0.0009 (6)
C190.0453 (10)0.0345 (8)0.0394 (10)−0.0070 (7)−0.0033 (7)−0.0014 (7)
C200.0295 (8)0.0503 (10)0.0431 (10)−0.0074 (7)−0.0027 (7)0.0052 (8)
C210.0329 (9)0.0533 (10)0.0480 (11)0.0059 (7)0.0050 (8)−0.0022 (8)
C220.0358 (9)0.0388 (9)0.0393 (10)0.0027 (7)0.0016 (7)−0.0060 (7)
F230.0348 (6)0.0915 (10)0.0656 (8)−0.0096 (6)−0.0107 (5)−0.0054 (7)
C1—N21.311 (2)C12—H120.9500
C1—C101.444 (2)C13—N141.335 (2)
C1—C111.491 (2)C13—H130.9500
N2—C31.362 (2)N14—C151.338 (2)
C3—N41.363 (2)C15—C161.383 (2)
C3—C81.412 (2)C15—H150.9500
N4—C51.316 (2)C16—H160.9500
C5—C61.404 (3)C17—C221.393 (2)
C5—H50.9500C17—C181.393 (2)
C6—C71.355 (3)C18—C191.381 (2)
C6—H60.9500C18—H180.9500
C7—C81.417 (2)C19—C201.371 (3)
C7—H70.9500C19—H190.9500
C8—N91.357 (2)C20—F231.349 (2)
N9—C101.3167 (19)C20—C211.375 (3)
C10—C171.482 (2)C21—C221.380 (2)
C11—C121.383 (2)C21—H210.9500
C11—C161.392 (2)C22—H220.9500
C12—C131.386 (2)
N2—C1—C10122.18 (14)C13—C12—H12120.5
N2—C1—C11115.41 (13)N14—C13—C12124.13 (17)
C10—C1—C11122.41 (14)N14—C13—H13117.9
C1—N2—C3117.45 (14)C12—C13—H13117.9
N2—C3—N4116.60 (14)C13—N14—C15116.18 (15)
N2—C3—C8120.38 (15)N14—C15—C16124.10 (17)
N4—C3—C8123.01 (15)N14—C15—H15118.0
C5—N4—C3115.75 (15)C16—C15—H15118.0
N4—C5—C6125.61 (16)C15—C16—C11118.86 (16)
N4—C5—H5117.2C15—C16—H16120.6
C6—C5—H5117.2C11—C16—H16120.6
C7—C6—C5119.09 (16)C22—C17—C18118.88 (15)
C7—C6—H6120.5C22—C17—C10118.89 (14)
C5—C6—H6120.5C18—C17—C10122.15 (14)
C6—C7—C8118.08 (16)C19—C18—C17120.45 (16)
C6—C7—H7121.0C19—C18—H18119.8
C8—C7—H7121.0C17—C18—H18119.8
N9—C8—C3121.61 (14)C20—C19—C18118.86 (16)
N9—C8—C7119.96 (14)C20—C19—H19120.6
C3—C8—C7118.43 (15)C18—C19—H19120.6
C10—N9—C8117.69 (13)F23—C20—C19118.82 (17)
N9—C10—C1120.54 (14)F23—C20—C21118.69 (17)
N9—C10—C17116.01 (13)C19—C20—C21122.49 (16)
C1—C10—C17123.44 (13)C20—C21—C22118.28 (17)
C12—C11—C16117.74 (15)C20—C21—H21120.9
C12—C11—C1122.42 (15)C22—C21—H21120.9
C16—C11—C1119.75 (15)C21—C22—C17121.02 (16)
C11—C12—C13118.99 (16)C21—C22—H22119.5
C11—C12—H12120.5C17—C22—H22119.5
C10—C1—N2—C33.3 (2)N2—C1—C11—C16−43.4 (2)
C11—C1—N2—C3−176.00 (14)C10—C1—C11—C16137.36 (16)
C1—N2—C3—N4179.30 (14)C16—C11—C12—C13−0.4 (2)
C1—N2—C3—C80.0 (2)C1—C11—C12—C13−176.96 (16)
N2—C3—N4—C5−178.11 (15)C11—C12—C13—N140.3 (3)
C8—C3—N4—C51.2 (2)C12—C13—N14—C150.0 (3)
C3—N4—C5—C60.3 (3)C13—N14—C15—C16−0.3 (3)
N4—C5—C6—C7−1.3 (3)N14—C15—C16—C110.2 (3)
C5—C6—C7—C80.6 (3)C12—C11—C16—C150.2 (2)
N2—C3—C8—N9−2.6 (2)C1—C11—C16—C15176.82 (15)
N4—C3—C8—N9178.18 (15)N9—C10—C17—C22−45.2 (2)
N2—C3—C8—C7177.49 (15)C1—C10—C17—C22135.38 (17)
N4—C3—C8—C7−1.8 (2)N9—C10—C17—C18131.58 (16)
C6—C7—C8—N9−179.16 (15)C1—C10—C17—C18−47.8 (2)
C6—C7—C8—C30.8 (2)C22—C17—C18—C19−0.1 (2)
C3—C8—N9—C101.6 (2)C10—C17—C18—C19−176.90 (15)
C7—C8—N9—C10−178.43 (15)C17—C18—C19—C20−0.1 (2)
C8—N9—C10—C11.6 (2)C18—C19—C20—F23179.01 (16)
C8—N9—C10—C17−177.79 (13)C18—C19—C20—C21−0.5 (3)
N2—C1—C10—N9−4.3 (2)F23—C20—C21—C22−178.31 (17)
C11—C1—C10—N9174.95 (15)C19—C20—C21—C221.2 (3)
N2—C1—C10—C17175.07 (14)C20—C21—C22—C17−1.3 (3)
C11—C1—C10—C17−5.7 (2)C18—C17—C22—C210.8 (3)
N2—C1—C11—C12133.14 (17)C10—C17—C22—C21177.73 (16)
C10—C1—C11—C12−46.1 (2)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  2 in total
  2 in total

1.  3-(4-Meth-oxy-phen-yl)pyrido[2,3-b]pyrazine.

Authors:  Cui-Ping Wang; Jing-Bo Yan; Hai-Jun Chi; Yan Dong; Zhi-Qiang Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-30

2.  Crystal structures of 2,3-bis-(thio-phen-2-yl)pyrido[2,3-b]pyrazine and 7-bromo-2,3-bis-(thio-phen-2-yl)pyrido[2,3-b]pyrazine.

Authors:  Rafal Popek; Guy Crundwell
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-01-01
  2 in total

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