| Literature DB >> 21577948 |
K K Upadhyay, Priyanka Rai, Shalini Upadhyay, M Nethaji.
Abstract
In the title compound, C(12)H(15)N(3)O(5)S, an intra-molecularEntities:
Year: 2009 PMID: 21577948 PMCID: PMC2970438 DOI: 10.1107/S1600536809036927
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H15N3O5S | |
| Monoclinic, | Melting point: 398 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 598 reflections | |
| θ = 2.5–27.5° | |
| µ = 0.26 mm−1 | |
| β = 95.219 (14)° | |
| Rectangular, colourless | |
| 0.24 × 0.22 × 0.20 mm |
| Bruker SMART APEX diffractometer | 3274 independent reflections |
| Radiation source: fine-focus sealed tube | 2177 reflections with |
| graphite | |
| Detector resolution: 0.3 pixels mm-1 | θmax = 28.2°, θmin = 2.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 11777 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full with fixed elements per cycle | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3274 reflections | (Δ/σ)max = 0.001 |
| 200 parameters | Δρmax = 0.59 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2438 (5) | 0.0661 (2) | 0.9456 (3) | 0.0391 (8) | |
| C2 | 0.2126 (5) | 0.1343 (2) | 1.0159 (3) | 0.0429 (8) | |
| H2 | 0.1983 | 0.1209 | 1.0862 | 0.051* | |
| C3 | 0.2030 (5) | 0.2223 (2) | 0.9809 (3) | 0.0433 (8) | |
| H3 | 0.1809 | 0.2684 | 1.0278 | 0.052* | |
| C4 | 0.2258 (5) | 0.2424 (2) | 0.8772 (2) | 0.0372 (7) | |
| C5 | 0.2609 (6) | 0.1745 (2) | 0.8081 (3) | 0.0518 (10) | |
| H5 | 0.2790 | 0.1883 | 0.7384 | 0.062* | |
| C6 | 0.2693 (6) | 0.0861 (2) | 0.8420 (3) | 0.0536 (10) | |
| H6 | 0.2920 | 0.0401 | 0.7951 | 0.064* | |
| C7 | 0.2498 (5) | −0.1296 (2) | 1.1080 (3) | 0.0400 (8) | |
| C8 | 0.2482 (5) | −0.1381 (2) | 1.2239 (3) | 0.0451 (9) | |
| C9 | 0.2452 (7) | −0.0539 (3) | 1.2876 (3) | 0.0659 (13) | |
| H9A | 0.2411 | −0.0691 | 1.3609 | 0.099* | |
| H9B | 0.1412 | −0.0190 | 1.2639 | 0.099* | |
| H9C | 0.3513 | −0.0193 | 1.2791 | 0.099* | |
| C10 | 0.2599 (5) | −0.2072 (2) | 1.0344 (3) | 0.0466 (9) | |
| C11 | 0.2122 (7) | −0.3643 (3) | 0.9952 (4) | 0.0624 (12) | |
| H11A | 0.1498 | −0.4147 | 1.0240 | 0.075* | |
| H11B | 0.1458 | −0.3458 | 0.9296 | 0.075* | |
| C12 | 0.3910 (8) | −0.3914 (3) | 0.9752 (5) | 0.0868 (17) | |
| H12A | 0.4491 | −0.3427 | 0.9419 | 0.130* | |
| H12B | 0.3847 | −0.4431 | 0.9294 | 0.130* | |
| H12C | 0.4583 | −0.4064 | 1.0409 | 0.130* | |
| H3A | 0.042 (6) | 0.330 (3) | 0.688 (4) | 0.055 (13)* | |
| H3B | −0.064 (6) | 0.334 (3) | 0.769 (4) | 0.049 (14)* | |
| N1 | 0.2500 (4) | −0.02524 (19) | 0.9754 (2) | 0.0469 (8) | |
| H1 | 0.2567 | −0.0667 | 0.9286 | 0.056* | |
| N2 | 0.2454 (4) | −0.0464 (2) | 1.0745 (2) | 0.0417 (7) | |
| N3 | 0.0211 (6) | 0.3532 (2) | 0.7471 (3) | 0.0481 (8) | |
| O1 | 0.1619 (4) | 0.40903 (16) | 0.9163 (2) | 0.0565 (8) | |
| O2 | 0.3416 (4) | 0.37652 (19) | 0.7692 (2) | 0.0581 (8) | |
| O4 | 0.2924 (5) | −0.19684 (19) | 0.9443 (2) | 0.0711 (10) | |
| O5 | 0.2233 (5) | −0.28696 (17) | 1.0729 (2) | 0.0620 (8) | |
| O6 | 0.2547 (5) | −0.21135 (18) | 1.2667 (2) | 0.0703 (9) | |
| S1 | 0.19753 (14) | 0.35341 (5) | 0.82925 (7) | 0.0425 (3) |
| C1 | 0.049 (2) | 0.0279 (16) | 0.0399 (17) | 0.0027 (14) | 0.0025 (15) | 0.0052 (13) |
| C2 | 0.062 (2) | 0.0381 (18) | 0.0278 (15) | 0.0020 (16) | 0.0020 (15) | 0.0040 (13) |
| C3 | 0.064 (2) | 0.0317 (17) | 0.0343 (16) | 0.0012 (15) | 0.0031 (15) | −0.0030 (13) |
| C4 | 0.052 (2) | 0.0285 (15) | 0.0305 (15) | −0.0009 (14) | 0.0022 (14) | 0.0018 (12) |
| C5 | 0.090 (3) | 0.0346 (18) | 0.0333 (17) | 0.0059 (19) | 0.0183 (18) | 0.0050 (14) |
| C6 | 0.094 (3) | 0.0294 (17) | 0.0392 (19) | 0.0098 (19) | 0.0148 (19) | 0.0008 (14) |
| C7 | 0.050 (2) | 0.0328 (17) | 0.0372 (17) | −0.0006 (14) | 0.0043 (15) | 0.0048 (13) |
| C8 | 0.055 (2) | 0.0417 (19) | 0.0383 (18) | −0.0101 (16) | 0.0017 (16) | 0.0054 (15) |
| C9 | 0.107 (4) | 0.049 (2) | 0.043 (2) | −0.015 (2) | 0.010 (2) | −0.0031 (18) |
| C10 | 0.064 (2) | 0.0351 (18) | 0.0416 (19) | 0.0099 (16) | 0.0103 (17) | 0.0076 (15) |
| C11 | 0.087 (3) | 0.043 (2) | 0.059 (3) | −0.006 (2) | 0.021 (2) | 0.0042 (18) |
| C12 | 0.091 (4) | 0.053 (3) | 0.112 (5) | 0.004 (3) | −0.009 (3) | 0.000 (3) |
| N1 | 0.073 (2) | 0.0307 (15) | 0.0374 (15) | 0.0042 (14) | 0.0051 (14) | 0.0063 (12) |
| N2 | 0.0537 (18) | 0.0352 (15) | 0.0361 (14) | −0.0017 (13) | 0.0032 (12) | 0.0083 (12) |
| N3 | 0.065 (2) | 0.0373 (17) | 0.0423 (18) | 0.0005 (16) | 0.0055 (16) | 0.0075 (14) |
| O1 | 0.088 (2) | 0.0294 (12) | 0.0521 (15) | −0.0011 (13) | 0.0082 (14) | −0.0060 (11) |
| O2 | 0.0708 (19) | 0.0462 (15) | 0.0591 (17) | −0.0080 (13) | 0.0152 (14) | 0.0121 (13) |
| O4 | 0.134 (3) | 0.0380 (15) | 0.0465 (15) | 0.0136 (16) | 0.0350 (18) | 0.0071 (12) |
| O5 | 0.113 (2) | 0.0307 (13) | 0.0460 (15) | 0.0019 (14) | 0.0270 (15) | 0.0046 (11) |
| O6 | 0.129 (3) | 0.0427 (16) | 0.0384 (14) | −0.0148 (17) | 0.0026 (16) | 0.0117 (12) |
| S1 | 0.0625 (6) | 0.0252 (4) | 0.0400 (5) | −0.0026 (4) | 0.0053 (4) | 0.0042 (3) |
| C1—C6 | 1.379 (5) | C9—H9B | 0.9600 |
| C1—C2 | 1.382 (5) | C9—H9C | 0.9600 |
| C1—N1 | 1.404 (4) | C10—O4 | 1.200 (4) |
| C2—C3 | 1.378 (5) | C10—O5 | 1.317 (4) |
| C2—H2 | 0.9300 | C11—C12 | 1.443 (7) |
| C3—C4 | 1.375 (5) | C11—O5 | 1.509 (5) |
| C3—H3 | 0.9300 | C11—H11A | 0.9700 |
| C4—C5 | 1.376 (5) | C11—H11B | 0.9700 |
| C4—S1 | 1.760 (3) | C12—H12A | 0.9600 |
| C5—C6 | 1.379 (5) | C12—H12B | 0.9600 |
| C5—H5 | 0.9300 | C12—H12C | 0.9600 |
| C6—H6 | 0.9300 | N1—N2 | 1.300 (4) |
| C7—N2 | 1.304 (4) | N1—H1 | 0.8600 |
| C7—C8 | 1.477 (5) | N3—S1 | 1.607 (4) |
| C7—C10 | 1.488 (5) | N3—H3A | 0.85 (5) |
| C8—O6 | 1.213 (4) | N3—H3B | 0.77 (4) |
| C8—C9 | 1.488 (5) | O1—S1 | 1.423 (3) |
| C9—H9A | 0.9600 | O2—S1 | 1.419 (3) |
| C6—C1—C2 | 120.3 (3) | O4—C10—O5 | 122.4 (4) |
| C6—C1—N1 | 117.4 (3) | O4—C10—C7 | 121.7 (3) |
| C2—C1—N1 | 122.3 (3) | O5—C10—C7 | 115.9 (3) |
| C3—C2—C1 | 119.5 (3) | C12—C11—O5 | 109.3 (4) |
| C3—C2—H2 | 120.3 | C12—C11—H11A | 109.8 |
| C1—C2—H2 | 120.3 | O5—C11—H11A | 109.8 |
| C4—C3—C2 | 120.4 (3) | C12—C11—H11B | 109.8 |
| C4—C3—H3 | 119.8 | O5—C11—H11B | 109.8 |
| C2—C3—H3 | 119.8 | H11A—C11—H11B | 108.3 |
| C3—C4—C5 | 120.0 (3) | C11—C12—H12A | 109.5 |
| C3—C4—S1 | 120.8 (3) | C11—C12—H12B | 109.5 |
| C5—C4—S1 | 119.1 (3) | H12A—C12—H12B | 109.5 |
| C4—C5—C6 | 120.1 (3) | C11—C12—H12C | 109.5 |
| C4—C5—H5 | 119.9 | H12A—C12—H12C | 109.5 |
| C6—C5—H5 | 119.9 | H12B—C12—H12C | 109.5 |
| C1—C6—C5 | 119.7 (3) | N2—N1—C1 | 119.3 (3) |
| C1—C6—H6 | 120.1 | N2—N1—H1 | 120.3 |
| C5—C6—H6 | 120.1 | C1—N1—H1 | 120.3 |
| N2—C7—C8 | 113.7 (3) | N1—N2—C7 | 122.7 (3) |
| N2—C7—C10 | 121.9 (3) | S1—N3—H3A | 111 (3) |
| C8—C7—C10 | 124.4 (3) | S1—N3—H3B | 115 (3) |
| O6—C8—C7 | 121.2 (3) | H3A—N3—H3B | 113 (5) |
| O6—C8—C9 | 120.6 (3) | C10—O5—C11 | 116.1 (3) |
| C7—C8—C9 | 118.1 (3) | O2—S1—O1 | 118.86 (18) |
| C8—C9—H9A | 109.5 | O2—S1—N3 | 105.8 (2) |
| C8—C9—H9B | 109.5 | O1—S1—N3 | 107.7 (2) |
| H9A—C9—H9B | 109.5 | O2—S1—C4 | 109.76 (17) |
| C8—C9—H9C | 109.5 | O1—S1—C4 | 107.32 (16) |
| H9A—C9—H9C | 109.5 | N3—S1—C4 | 106.76 (17) |
| H9B—C9—H9C | 109.5 | ||
| C6—C1—C2—C3 | 1.5 (6) | N2—C7—C10—O5 | −165.3 (4) |
| N1—C1—C2—C3 | −178.1 (3) | C8—C7—C10—O5 | 16.2 (6) |
| C1—C2—C3—C4 | −0.6 (6) | C6—C1—N1—N2 | 172.9 (4) |
| C2—C3—C4—C5 | −0.9 (6) | C2—C1—N1—N2 | −7.5 (5) |
| C2—C3—C4—S1 | 175.3 (3) | C1—N1—N2—C7 | 179.7 (3) |
| C3—C4—C5—C6 | 1.5 (6) | C8—C7—N2—N1 | 178.4 (3) |
| S1—C4—C5—C6 | −174.8 (3) | C10—C7—N2—N1 | −0.2 (6) |
| C2—C1—C6—C5 | −1.0 (6) | O4—C10—O5—C11 | −4.0 (6) |
| N1—C1—C6—C5 | 178.7 (4) | C7—C10—O5—C11 | 173.1 (3) |
| C4—C5—C6—C1 | −0.5 (7) | C12—C11—O5—C10 | 77.1 (5) |
| N2—C7—C8—O6 | −178.8 (4) | C3—C4—S1—O2 | 133.9 (3) |
| C10—C7—C8—O6 | −0.3 (6) | C5—C4—S1—O2 | −49.9 (4) |
| N2—C7—C8—C9 | −1.0 (5) | C3—C4—S1—O1 | 3.4 (4) |
| C10—C7—C8—C9 | 177.5 (4) | C5—C4—S1—O1 | 179.6 (3) |
| N2—C7—C10—O4 | 11.8 (6) | C3—C4—S1—N3 | −111.9 (3) |
| C8—C7—C10—O4 | −166.7 (4) | C5—C4—S1—N3 | 64.3 (4) |
| H··· | ||||
| N1—H1···O4 | 0.86 | 1.95 | 2.597 (5) | 131 |
| N3—H3B···O6i | 0.77 (5) | 2.33 (4) | 2.941 (6) | 137 (4) |
| N3—H3B···O5i | 0.77 (5) | 2.52 (5) | 3.208 (6) | 149 (5) |
| N3—H3A···O4ii | 0.85 (5) | 2.21 (5) | 3.003 (6) | 154 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O4 | 0.86 | 1.95 | 2.597 (5) | 131 |
| N3—H3 | 0.77 (5) | 2.33 (4) | 2.941 (6) | 137 (4) |
| N3—H3 | 0.77 (5) | 2.52 (5) | 3.208 (6) | 149 (5) |
| N3—H3 | 0.85 (5) | 2.21 (5) | 3.003 (6) | 154 (4) |
Symmetry codes: (i) ; (ii) .