Literature DB >> 21577941

1-(But-2-enyl-idene)-2-(2-nitro-phen-yl)hydrazine.

Zhi-Gang Yin1, Heng-Yu Qian, Xue-Wen Zhu, Chun-Xia Zhang.   

Abstract

The mol-ecule of the title Schiff base compound, C(10)H(11)N(3)O(2), adopts an E geometry with respect to the C=N double bond. The mol-ecule is roughly planar, with the largest deviation from the mean plane being 0.111 (2) Å, The enyl-idene-hydrazine group is, however, slightly twisted with respect to the phenyl ring, making a dihedral angle of 6.5 (3)°. An intra-molecular N-H⋯O hydrogen bond may be responsible for the planar conformation. An inter-molecular N-H⋯O hydrogen bond links two mol-ecules around an inversion center, building a pseudo dimer.

Entities:  

Year:  2009        PMID: 21577941      PMCID: PMC2970396          DOI: 10.1107/S1600536809037179

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the role played by Schiff base compounds in the development of various proteins and enzymes, see: Kahwa et al. (1986 ▶); Santos et al. (2001 ▶).

Experimental

Crystal data

C10H11N3O2 M = 205.22 Triclinic, a = 4.2390 (6) Å b = 11.456 (2) Å c = 11.9840 (17) Å α = 113.271 (15)° β = 96.534 (12)° γ = 95.595 (13)° V = 524.64 (16) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.25 × 0.19 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.979, T max = 0.982 3321 measured reflections 1758 independent reflections 587 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.080 S = 0.68 1758 reflections 137 parameters H-atom parameters constrained Δρmax = 0.12 e Å−3 Δρmin = −0.11 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809037179/dn2487sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809037179/dn2487Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H11N3O2Z = 2
Mr = 205.22F(000) = 216
Triclinic, P1Dx = 1.299 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 4.2390 (6) ÅCell parameters from 1958 reflections
b = 11.456 (2) Åθ = 3.2–26.0°
c = 11.9840 (17) ŵ = 0.09 mm1
α = 113.271 (15)°T = 296 K
β = 96.534 (12)°Block, red
γ = 95.595 (13)°0.25 × 0.19 × 0.18 mm
V = 524.64 (16) Å3
Bruker SMART CCD area-detector diffractometer1758 independent reflections
Radiation source: fine-focus sealed tube587 reflections with I > 2σ(I)
graphiteRint = 0.039
ω scansθmax = 25.0°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 1998)h = −5→4
Tmin = 0.979, Tmax = 0.982k = −13→12
3321 measured reflectionsl = 0→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 0.68w = 1/[σ2(Fo2) + (0.0315P)2] where P = (Fo2 + 2Fc2)/3
1758 reflections(Δ/σ)max < 0.001
137 parametersΔρmax = 0.12 e Å3
0 restraintsΔρmin = −0.11 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.2639 (7)0.1906 (3)−0.4898 (3)0.0923 (12)
H1A1.18680.2699−0.47860.138*
H1B1.15350.1237−0.56610.138*
H1C1.49050.2007−0.49160.138*
C21.2028 (7)0.1556 (3)−0.3856 (3)0.0637 (10)
H21.27650.0820−0.38510.076*
C31.0549 (7)0.2191 (3)−0.2947 (3)0.0601 (10)
H30.97570.2916−0.29580.072*
C41.0060 (7)0.1857 (3)−0.1944 (3)0.0549 (9)
H41.07910.1129−0.19130.066*
C50.6836 (7)0.2802 (3)0.0774 (2)0.0451 (9)
C60.6046 (6)0.4007 (3)0.0883 (3)0.0584 (9)
H60.64890.43080.02930.070*
C70.4654 (7)0.4732 (3)0.1834 (3)0.0681 (10)
H70.41530.55200.18790.082*
C80.3955 (8)0.4328 (4)0.2745 (3)0.0767 (11)
H80.30120.48400.33940.092*
C90.4679 (7)0.3169 (3)0.2666 (3)0.0641 (10)
H90.42280.28830.32650.077*
C100.6101 (7)0.2408 (3)0.1686 (2)0.0497 (9)
N10.8634 (6)0.2541 (2)−0.1088 (2)0.0553 (7)
N20.8205 (5)0.2108 (2)−0.01925 (19)0.0548 (8)
H2A0.88070.1395−0.02460.066*
N30.6751 (6)0.1190 (3)0.1671 (2)0.0634 (8)
O10.5896 (6)0.0865 (2)0.2464 (2)0.0933 (9)
O20.8241 (5)0.05249 (18)0.08917 (18)0.0722 (7)
U11U22U33U12U13U23
C10.096 (3)0.119 (3)0.074 (2)0.006 (2)0.027 (2)0.051 (2)
C20.075 (3)0.063 (2)0.062 (2)0.006 (2)0.0186 (19)0.0343 (19)
C30.069 (3)0.065 (3)0.057 (2)0.014 (2)0.011 (2)0.0350 (19)
C40.063 (2)0.052 (2)0.057 (2)0.0116 (19)0.0080 (18)0.0305 (19)
C50.048 (2)0.041 (2)0.049 (2)0.0052 (18)0.0036 (17)0.0236 (18)
C60.064 (2)0.053 (2)0.072 (2)0.014 (2)0.0155 (17)0.0372 (19)
C70.084 (3)0.048 (3)0.082 (2)0.017 (2)0.022 (2)0.032 (2)
C80.080 (3)0.071 (3)0.082 (3)0.025 (2)0.028 (2)0.026 (2)
C90.079 (3)0.063 (3)0.059 (2)0.016 (2)0.0244 (18)0.030 (2)
C100.057 (2)0.045 (2)0.056 (2)0.0113 (19)0.0112 (17)0.0282 (18)
N10.068 (2)0.056 (2)0.0565 (16)0.0143 (15)0.0179 (15)0.0347 (16)
N20.076 (2)0.052 (2)0.0548 (16)0.0199 (16)0.0241 (15)0.0353 (15)
N30.073 (2)0.073 (2)0.0618 (18)0.0175 (18)0.0187 (15)0.0431 (18)
O10.149 (2)0.084 (2)0.0911 (17)0.0467 (17)0.0603 (16)0.0652 (16)
O20.1081 (19)0.0611 (18)0.0802 (14)0.0410 (15)0.0499 (13)0.0479 (13)
C1—C21.495 (4)C6—C71.356 (3)
C1—H1A0.9600C6—H60.9300
C1—H1B0.9600C7—C81.392 (4)
C1—H1C0.9600C7—H70.9300
C2—C31.314 (3)C8—C91.361 (3)
C2—H20.9300C8—H80.9300
C3—C41.429 (3)C9—C101.399 (3)
C3—H30.9300C9—H90.9300
C4—N11.276 (3)C10—N31.442 (3)
C4—H40.9300N1—N21.371 (3)
C5—N21.351 (3)N2—H2A0.8600
C5—C101.392 (3)N3—O11.227 (3)
C5—C61.411 (3)N3—O21.232 (3)
C2—C1—H1A109.5C5—C6—H6119.4
C2—C1—H1B109.5C6—C7—C8121.7 (3)
H1A—C1—H1B109.5C6—C7—H7119.1
C2—C1—H1C109.5C8—C7—H7119.1
H1A—C1—H1C109.5C9—C8—C7118.7 (3)
H1B—C1—H1C109.5C9—C8—H8120.7
C3—C2—C1126.1 (3)C7—C8—H8120.7
C3—C2—H2116.9C8—C9—C10120.1 (3)
C1—C2—H2116.9C8—C9—H9119.9
C2—C3—C4125.2 (3)C10—C9—H9119.9
C2—C3—H3117.4C5—C10—C9121.9 (3)
C4—C3—H3117.4C5—C10—N3121.8 (3)
N1—C4—C3121.1 (3)C9—C10—N3116.3 (3)
N1—C4—H4119.5C4—N1—N2116.1 (2)
C3—C4—H4119.5C5—N2—N1119.9 (2)
N2—C5—C10124.5 (3)C5—N2—H2A120.0
N2—C5—C6119.1 (3)N1—N2—H2A120.0
C10—C5—C6116.4 (3)O1—N3—O2121.7 (3)
C7—C6—C5121.1 (3)O1—N3—C10118.9 (3)
C7—C6—H6119.4O2—N3—C10119.4 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O20.862.002.615 (3)127
N2—H2A···O2i0.862.533.353 (3)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O20.862.002.615 (3)127
N2—H2A⋯O2i0.862.533.353 (3)160

Symmetry code: (i) .

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