| Literature DB >> 21577868 |
Ping Fan, Lei Wang, Huidong Zhang.
Abstract
In the title salt, C(6)H(8)N(3) (+)·Cl(-), each pyridine-carbox-imid-amidate cation is linked to two symmetry-related cations through N-H⋯N hydrogen bonds, and to two chloride ions by N-H⋯Cl hydrogen bonds. The N-H⋯N hydrogen bonds involve the pyridine N atom and one NH(2) group. In the crystal, N-H⋯N and N-H⋯Cl hydrogen bonds extend the structure into two-dimensional layers. Weak C-H⋯Cl inter-actions further connect these layers into a three-dimensional network.Entities:
Year: 2009 PMID: 21577868 PMCID: PMC2970348 DOI: 10.1107/S160053680903517X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H8N3+·Cl− | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 542 reflections |
| θ = 2.3–22.8° | |
| µ = 0.44 mm−1 | |
| Block, colourless | |
| 0.37 × 0.32 × 0.21 mm |
| Bruker SMART CCD area-detector diffractometer | 1435 independent reflections |
| Radiation source: fine-focus sealed tube | 1215 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 1949 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| (Δ/σ)max = 0.001 | |
| 1435 reflections | Δρmax = 0.23 e Å−3 |
| 124 parameters | Δρmin = −0.17 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0056 (15) |
| N1 | 0.0852 (2) | 0.38353 (14) | 0.75509 (8) | 0.0367 (4) | |
| C1 | 0.0499 (3) | 0.36114 (17) | 0.82329 (10) | 0.0367 (4) | |
| Cl1 | 0.15740 (8) | 0.91636 (4) | 1.05546 (2) | 0.0432 (2) | |
| N2 | 0.0353 (2) | 0.79417 (15) | 0.89141 (9) | 0.0369 (4) | |
| C2 | 0.0593 (3) | 0.45387 (17) | 0.87518 (9) | 0.0341 (4) | |
| N3 | 0.1766 (3) | 0.66264 (17) | 0.97084 (9) | 0.0428 (4) | |
| C3 | 0.1026 (2) | 0.57807 (15) | 0.85578 (9) | 0.0285 (4) | |
| C4 | 0.1401 (3) | 0.60305 (17) | 0.78520 (9) | 0.0337 (4) | |
| C5 | 0.1315 (3) | 0.50297 (18) | 0.73774 (9) | 0.0376 (4) | |
| C6 | 0.1052 (2) | 0.68338 (16) | 0.90895 (9) | 0.0310 (4) | |
| H4 | 0.171 (3) | 0.6863 (18) | 0.7679 (10) | 0.033 (5)* | |
| H1 | 0.015 (3) | 0.275 (2) | 0.8348 (11) | 0.044 (6)* | |
| H2 | 0.032 (3) | 0.4327 (18) | 0.9204 (11) | 0.041 (5)* | |
| H5 | 0.159 (3) | 0.519 (2) | 0.6925 (12) | 0.048 (6)* | |
| H2B | 0.037 (3) | 0.854 (2) | 0.9202 (13) | 0.060 (7)* | |
| H2A | −0.016 (3) | 0.803 (2) | 0.8500 (12) | 0.050 (6)* | |
| H3B | 0.229 (4) | 0.590 (2) | 0.9833 (12) | 0.056 (7)* | |
| H3A | 0.184 (3) | 0.732 (2) | 1.0012 (14) | 0.061 (7)* |
| N1 | 0.0452 (9) | 0.0312 (8) | 0.0338 (8) | 0.0019 (7) | 0.0001 (7) | −0.0051 (7) |
| C1 | 0.0439 (11) | 0.0261 (9) | 0.0400 (10) | −0.0002 (8) | −0.0007 (9) | 0.0007 (7) |
| Cl1 | 0.0580 (3) | 0.0357 (3) | 0.0359 (3) | 0.0007 (2) | −0.0055 (2) | −0.00566 (18) |
| N2 | 0.0484 (10) | 0.0262 (8) | 0.0360 (9) | 0.0009 (7) | 0.0006 (8) | −0.0043 (7) |
| C2 | 0.0436 (11) | 0.0306 (9) | 0.0280 (9) | 0.0035 (8) | 0.0027 (8) | 0.0019 (7) |
| N3 | 0.0613 (12) | 0.0348 (9) | 0.0323 (8) | 0.0070 (8) | −0.0090 (8) | −0.0067 (7) |
| C3 | 0.0313 (9) | 0.0266 (8) | 0.0277 (8) | 0.0021 (7) | −0.0020 (7) | −0.0021 (7) |
| C4 | 0.0421 (10) | 0.0280 (9) | 0.0310 (9) | −0.0020 (8) | 0.0003 (8) | 0.0024 (7) |
| C5 | 0.0488 (12) | 0.0377 (10) | 0.0264 (9) | −0.0002 (8) | 0.0022 (8) | −0.0012 (8) |
| C6 | 0.0348 (9) | 0.0280 (9) | 0.0300 (9) | −0.0018 (7) | 0.0031 (7) | −0.0020 (7) |
| N1—C5 | 1.335 (2) | N3—C6 | 1.303 (2) |
| N1—C1 | 1.337 (2) | N3—H3B | 0.89 (2) |
| C1—C2 | 1.381 (3) | N3—H3A | 0.93 (3) |
| C1—H1 | 0.96 (2) | C3—C4 | 1.389 (2) |
| N2—C6 | 1.310 (2) | C3—C6 | 1.491 (2) |
| N2—H2B | 0.83 (3) | C4—C5 | 1.380 (3) |
| N2—H2A | 0.88 (2) | C4—H4 | 0.958 (19) |
| C2—C3 | 1.386 (2) | C5—H5 | 0.90 (2) |
| C2—H2 | 0.91 (2) | ||
| C5—N1—C1 | 116.80 (15) | C2—C3—C4 | 118.47 (16) |
| N1—C1—C2 | 123.63 (17) | C2—C3—C6 | 120.99 (15) |
| N1—C1—H1 | 115.7 (12) | C4—C3—C6 | 120.52 (15) |
| C2—C1—H1 | 120.6 (12) | C5—C4—C3 | 118.33 (17) |
| C6—N2—H2B | 119.8 (17) | C5—C4—H4 | 118.5 (11) |
| C6—N2—H2A | 119.2 (15) | C3—C4—H4 | 123.2 (11) |
| H2B—N2—H2A | 121 (2) | N1—C5—C4 | 124.05 (17) |
| C1—C2—C3 | 118.68 (16) | N1—C5—H5 | 118.2 (15) |
| C1—C2—H2 | 119.3 (13) | C4—C5—H5 | 117.7 (15) |
| C3—C2—H2 | 122.0 (13) | N3—C6—N2 | 122.31 (17) |
| C6—N3—H3B | 123.9 (15) | N3—C6—C3 | 119.28 (16) |
| C6—N3—H3A | 116.9 (16) | N2—C6—C3 | 118.41 (16) |
| H3B—N3—H3A | 119 (2) |
| H··· | ||||
| N2—H2A···N1i | 0.88 (2) | 2.22 (2) | 3.058 (2) | 160 (2) |
| N3—H3A···Cl1 | 0.93 (2) | 2.19 (2) | 3.100 (2) | 167 (2) |
| N2—H2B···Cl1 | 0.83 (2) | 2.79 (2) | 3.476 (2) | 142 (2) |
| N3—H3B···Cl1ii | 0.89 (2) | 2.41 (2) | 3.270 (2) | 161 (2) |
| C5—H5···Cl1iii | 0.90 (2) | 2.68 (2) | 3.556 (2) | 166 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.88 (2) | 2.22 (2) | 3.058 (2) | 160 (2) |
| N2—H2 | 0.83 (2) | 2.79 (2) | 3.476 (2) | 142 (2) |
| N3—H3 | 0.93 (2) | 2.19 (2) | 3.100 (2) | 167 (2) |
| N3—H3 | 0.89 (2) | 2.41 (2) | 3.270 (2) | 161 (2) |
| C5—H5⋯Cl1iii | 0.90 (2) | 2.68 (2) | 3.556 (2) | 166 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .