Literature DB >> 21577860

(S)-1-Methoxy-carbonyl-3-(4-nitro-phen-yl)propan-2-aminium bromide.

Bo Wang1.   

Abstract

In the crystal structure of the title compound, C(10)H(13)N(2)O(4) (+)·Br(-), inter-molecular N-H⋯Br and N-H⋯(O,Br) hydrogen bonds link the cations and anions into a two-dimensional network parallel to the ab plane.

Entities:  

Year:  2009        PMID: 21577860      PMCID: PMC2970394          DOI: 10.1107/S1600536809034904

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of metal-organic coordination compounds, see: Xiong et al. (1999 ▶); Fu, Zhang et al. (2008 ▶); Fu & Xiong (2008 ▶). For metal-organic frameworks with amino acid deriv­atives, see: Chen et al. (2000 ▶); Xie et al. (2002 ▶); Fu et al. (2007 ▶).

Experimental

Crystal data

C10H13N2O4 +·Br M = 305.13 Monoclinic, a = 4.9323 (10) Å b = 8.6233 (17) Å c = 15.226 (3) Å β = 95.77 (3)° V = 644.3 (2) Å3 Z = 2 Mo Kα radiation μ = 3.20 mm−1 T = 298 K 0.40 × 0.05 × 0.05 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.90, T max = 1.00 6658 measured reflections 2917 independent reflections 2532 reflections with I > 2σ(I) R int = 0.055

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.085 S = 1.04 2917 reflections 154 parameters 1 restraint H-atom parameters constrained Δρmax = 0.62 e Å−3 Δρmin = −0.30 e Å−3 Absolute structure: Flack (1983 ▶), 1202 Friedel pairs Flack parameter: 0.008 (5) Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809034904/cv2604sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034904/cv2604Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H13N2O4+·BrF(000) = 308
Mr = 305.13Dx = 1.573 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 2532 reflections
a = 4.9323 (10) Åθ = 3.6–27.5°
b = 8.6233 (17) ŵ = 3.20 mm1
c = 15.226 (3) ÅT = 298 K
β = 95.77 (3)°Needle, colourless
V = 644.3 (2) Å30.40 × 0.05 × 0.05 mm
Z = 2
Rigaku Mercury2 diffractometer2917 independent reflections
Radiation source: fine-focus sealed tube2532 reflections with I > 2σ(I)
graphiteRint = 0.055
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.6°
CCD profile fitting scansh = −6→6
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −11→11
Tmin = 0.90, Tmax = 1.00l = −19→19
6658 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H-atom parameters constrained
wR(F2) = 0.085w = 1/[σ2(Fo2)]
S = 1.03(Δ/σ)max < 0.001
2917 reflectionsΔρmax = 0.62 e Å3
154 parametersΔρmin = −0.30 e Å3
1 restraintAbsolute structure: Flack (1983), 1202 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.008 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C60.4984 (8)0.4001 (4)0.7127 (2)0.0390 (9)
C20.8039 (10)0.2806 (6)0.6203 (3)0.0565 (12)
H20.93590.20630.61220.068*
C70.3794 (8)0.4113 (5)0.7995 (2)0.0438 (10)
H7A0.33490.30810.81880.053*
H7B0.21180.47080.79160.053*
C30.7186 (9)0.3798 (6)0.5544 (3)0.0527 (12)
C50.4128 (9)0.5000 (5)0.6421 (3)0.0554 (11)
H50.27960.57420.64890.067*
C40.5236 (10)0.4886 (6)0.5644 (3)0.0642 (15)
H40.46670.55500.51800.077*
C10.6940 (9)0.2910 (5)0.6986 (3)0.0481 (11)
H10.75230.22260.74390.058*
O10.7970 (5)0.6832 (4)0.79876 (16)0.0488 (7)
C90.6074 (6)0.6629 (6)0.85319 (19)0.0360 (7)
O20.4710 (6)0.7600 (3)0.88109 (18)0.0495 (7)
C80.5764 (8)0.4886 (4)0.8712 (2)0.0325 (8)
H80.75510.43840.87310.039*
N20.8359 (11)0.3691 (6)0.4697 (3)0.0759 (13)
O31.0072 (9)0.2696 (7)0.4603 (2)0.1077 (17)
O40.7514 (11)0.4561 (6)0.4108 (3)0.1200 (18)
C100.8330 (12)0.8435 (6)0.7701 (3)0.0717 (15)
H10A0.97360.84720.73080.107*
H10B0.88370.90760.82060.107*
H10C0.66530.88080.73990.107*
N10.4679 (6)0.4728 (4)0.95973 (18)0.0391 (8)
H1A0.60150.47361.00210.059*
H1B0.32450.54280.95910.059*
H1C0.38350.36720.96070.059*
Br10.99538 (6)0.66497 (4)0.05395 (2)0.04632 (13)
U11U22U33U12U13U23
C60.045 (2)0.043 (2)0.029 (2)−0.0124 (19)0.0045 (17)−0.0031 (18)
C20.065 (3)0.061 (3)0.045 (3)0.003 (2)0.009 (2)−0.018 (2)
C70.042 (2)0.050 (2)0.041 (2)−0.014 (2)0.0121 (18)−0.006 (2)
C30.064 (3)0.064 (3)0.032 (2)−0.019 (2)0.015 (2)−0.014 (2)
C50.062 (3)0.056 (3)0.049 (3)0.007 (2)0.006 (2)0.002 (2)
C40.096 (4)0.064 (3)0.033 (3)−0.005 (3)0.010 (3)0.008 (2)
C10.063 (3)0.041 (2)0.040 (2)0.003 (2)0.005 (2)−0.0061 (19)
O10.0659 (16)0.0393 (17)0.0455 (14)−0.0094 (17)0.0266 (12)−0.0001 (15)
C90.0413 (16)0.0386 (16)0.0280 (16)−0.001 (3)0.0032 (13)0.001 (2)
O20.0603 (18)0.0379 (16)0.0533 (18)0.0130 (15)0.0201 (14)0.0078 (14)
C80.039 (2)0.0319 (19)0.0278 (19)0.0033 (17)0.0099 (15)−0.0005 (16)
N20.098 (4)0.094 (3)0.039 (3)−0.028 (3)0.024 (3)−0.021 (2)
O30.109 (4)0.151 (5)0.070 (3)−0.003 (3)0.044 (3)−0.034 (3)
O40.177 (5)0.142 (4)0.049 (3)−0.017 (4)0.048 (3)0.001 (3)
C100.103 (4)0.058 (3)0.059 (3)−0.015 (3)0.031 (3)0.010 (2)
N10.054 (2)0.0350 (17)0.0299 (17)0.0033 (15)0.0137 (15)0.0039 (14)
Br10.0471 (2)0.0436 (2)0.0490 (2)0.0020 (3)0.00881 (15)−0.0088 (3)
C6—C11.380 (6)O1—C91.322 (4)
C6—C51.408 (5)O1—C101.466 (6)
C6—C71.503 (5)C9—O21.180 (5)
C2—C31.353 (6)C9—C81.538 (6)
C2—C11.363 (5)C8—N11.506 (4)
C2—H20.9300C8—H80.9800
C7—C81.538 (5)N2—O41.210 (6)
C7—H7A0.9700N2—O31.223 (6)
C7—H7B0.9700C10—H10A0.9600
C3—C41.363 (6)C10—H10B0.9600
C3—N21.468 (6)C10—H10C0.9600
C5—C41.356 (5)N1—H1A0.8742
C5—H50.9300N1—H1B0.9289
C4—H40.9300N1—H1C1.0023
C1—H10.9300
C1—C6—C5117.4 (4)O2—C9—O1126.6 (5)
C1—C6—C7121.4 (4)O2—C9—C8124.0 (3)
C5—C6—C7121.2 (4)O1—C9—C8109.3 (4)
C3—C2—C1119.1 (4)N1—C8—C9107.4 (3)
C3—C2—H2120.4N1—C8—C7109.9 (3)
C1—C2—H2120.4C9—C8—C7111.4 (3)
C6—C7—C8112.1 (3)N1—C8—H8109.4
C6—C7—H7A109.2C9—C8—H8109.4
C8—C7—H7A109.2C7—C8—H8109.4
C6—C7—H7B109.2O4—N2—O3122.6 (5)
C8—C7—H7B109.2O4—N2—C3118.3 (6)
H7A—C7—H7B107.9O3—N2—C3119.0 (5)
C2—C3—C4121.5 (4)O1—C10—H10A109.5
C2—C3—N2119.4 (5)O1—C10—H10B109.5
C4—C3—N2119.1 (5)H10A—C10—H10B109.5
C4—C5—C6120.3 (4)O1—C10—H10C109.5
C4—C5—H5119.8H10A—C10—H10C109.5
C6—C5—H5119.8H10B—C10—H10C109.5
C5—C4—C3119.9 (4)C8—N1—H1A110.5
C5—C4—H4120.1C8—N1—H1B105.7
C3—C4—H4120.1H1A—N1—H1B121.3
C2—C1—C6121.8 (4)C8—N1—H1C106.3
C2—C1—H1119.1H1A—N1—H1C106.2
C6—C1—H1119.1H1B—N1—H1C105.9
C9—O1—C10115.2 (4)
C1—C6—C7—C875.9 (5)C10—O1—C9—O2−1.2 (5)
C5—C6—C7—C8−104.6 (4)C10—O1—C9—C8175.3 (3)
C1—C2—C3—C4−0.6 (7)O2—C9—C8—N1−29.0 (4)
C1—C2—C3—N2−179.9 (4)O1—C9—C8—N1154.3 (3)
C1—C6—C5—C4−0.8 (6)O2—C9—C8—C791.3 (4)
C7—C6—C5—C4179.7 (4)O1—C9—C8—C7−85.4 (3)
C6—C5—C4—C30.1 (7)C6—C7—C8—N1−170.5 (3)
C2—C3—C4—C50.6 (7)C6—C7—C8—C970.7 (4)
N2—C3—C4—C5179.9 (4)C2—C3—N2—O4178.0 (5)
C3—C2—C1—C6−0.2 (7)C4—C3—N2—O4−1.3 (7)
C5—C6—C1—C20.9 (6)C2—C3—N2—O30.6 (7)
C7—C6—C1—C2−179.7 (4)C4—C3—N2—O3−178.7 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.872.613.031 (4)111
N1—H1A···Br1ii0.872.613.290 (3)135
N1—H1B···Br1iii0.932.513.303 (3)143
N1—H1C···Br1iv1.002.553.495 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O2i0.872.613.031 (4)111
N1—H1A⋯Br1ii0.872.613.290 (3)135
N1—H1B⋯Br1iii0.932.513.303 (3)143
N1—H1C⋯Br1iv1.002.553.495 (3)157

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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