| Literature DB >> 21577844 |
Abdul Wahab Salae, Suchada Chantrapromma, Hoong-Kun Fun, Chatchanok Karalai.
Abstract
The title compound {systematic name: 5,6,10-trihydr-oxy-7-iso-propyl-1,1,4a-trimethyl-2,3,4,4a-tetra-hydro-phenanthren-9(1H)-one}, C(20)H(26)O(4), is a diterpenoid which was isolated from the roots of Premna obtusifolia. The mol-ecule has three fused six-membered rings; the cyclo-hexane ring is in a twisted-boat conformation and the cyclo-hexene ring adopts a sofa form. Intra-molecular O-H⋯O hydrogen bonds generate two S(5) ring motifs. In the crystal, mol-ecules are linked into infinite one-dimensional chains along the [001] direction by O-H⋯O hydrogen bonds and weak C-H⋯O inter-actions.Entities:
Year: 2009 PMID: 21577844 PMCID: PMC2970173 DOI: 10.1107/S1600536809034990
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H26O4 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 3890 reflections |
| θ = 2.1–34.0° | |
| µ = 0.09 mm−1 | |
| Block, colourless | |
| 0.35 × 0.30 × 0.27 mm |
| Bruker APEXII CCD area-detector diffractometer | 3890 independent reflections |
| Radiation source: sealed tube | 3530 reflections with |
| graphite | |
| φ and ω scans | θmax = 34.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 36584 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3890 reflections | (Δ/σ)max = 0.001 |
| 230 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.41 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.26452 (14) | 0.14460 (7) | 0.64485 (7) | 0.0216 (2) | |
| H1O1 | 0.269 (3) | 0.2000 (18) | 0.6119 (16) | 0.041 (7)* | |
| O2 | 0.25851 (15) | 0.33755 (7) | 0.66826 (6) | 0.0238 (2) | |
| O3 | 0.24282 (12) | 0.46627 (7) | 1.11140 (6) | 0.01532 (17) | |
| H1O3 | 0.2434 | 0.5285 | 1.1112 | 0.023* | |
| O4 | 0.25735 (12) | 0.27209 (7) | 1.09834 (6) | 0.01710 (18) | |
| H1O4 | 0.255 (3) | 0.3196 (17) | 1.1358 (17) | 0.036 (6)* | |
| C1 | 0.14764 (15) | 0.10997 (9) | 0.98617 (9) | 0.0161 (2) | |
| H1A | 0.1868 | 0.1047 | 1.0509 | 0.019* | |
| H1B | 0.0673 | 0.1553 | 0.9895 | 0.019* | |
| C2 | 0.09602 (14) | 0.00517 (10) | 0.95499 (9) | 0.0168 (2) | |
| H2A | 0.0690 | −0.0333 | 1.0119 | 0.020* | |
| H2B | 0.0132 | 0.0129 | 0.9145 | 0.020* | |
| C3 | 0.20820 (14) | −0.05358 (9) | 0.89937 (9) | 0.0152 (2) | |
| H3A | 0.1749 | −0.1219 | 0.8868 | 0.018* | |
| H3B | 0.2931 | −0.0583 | 0.9382 | 0.018* | |
| C4 | 0.24219 (15) | −0.00022 (9) | 0.80244 (8) | 0.01321 (19) | |
| C5 | 0.24938 (13) | 0.11553 (8) | 0.81616 (8) | 0.01206 (19) | |
| C6 | 0.25713 (15) | 0.17857 (9) | 0.73871 (8) | 0.0149 (2) | |
| C7 | 0.25656 (15) | 0.28915 (9) | 0.74601 (8) | 0.0148 (2) | |
| C8 | 0.25181 (14) | 0.33614 (8) | 0.84122 (7) | 0.01221 (19) | |
| C9 | 0.25195 (13) | 0.27427 (8) | 0.92386 (7) | 0.01059 (18) | |
| C10 | 0.26085 (13) | 0.15838 (8) | 0.91835 (8) | 0.01090 (18) | |
| C11 | 0.25257 (14) | 0.32476 (8) | 1.01300 (8) | 0.01188 (19) | |
| C12 | 0.24742 (13) | 0.43145 (8) | 1.01841 (7) | 0.01168 (19) | |
| C13 | 0.24969 (14) | 0.49232 (9) | 0.93547 (8) | 0.01231 (19) | |
| C14 | 0.25199 (14) | 0.44240 (9) | 0.84711 (8) | 0.0138 (2) | |
| H14A | 0.2537 | 0.4803 | 0.7903 | 0.017* | |
| C15 | 0.24938 (15) | 0.60771 (8) | 0.94329 (8) | 0.0140 (2) | |
| H15A | 0.3063 | 0.6260 | 0.9999 | 0.017* | |
| C16 | 0.3149 (2) | 0.65916 (11) | 0.85549 (11) | 0.0284 (3) | |
| H16A | 0.4040 | 0.6281 | 0.8413 | 0.043* | |
| H16B | 0.3287 | 0.7300 | 0.8690 | 0.043* | |
| H16C | 0.2533 | 0.6519 | 0.8008 | 0.043* | |
| C17 | 0.09920 (15) | 0.64681 (10) | 0.96124 (11) | 0.0208 (3) | |
| H17A | 0.1012 | 0.7192 | 0.9692 | 0.031* | |
| H17B | 0.0620 | 0.6159 | 1.0188 | 0.031* | |
| H17C | 0.0406 | 0.6297 | 0.9070 | 0.031* | |
| C18 | 0.12286 (15) | −0.02886 (11) | 0.73086 (10) | 0.0202 (3) | |
| H18A | 0.1413 | 0.0014 | 0.6689 | 0.030* | |
| H18B | 0.0345 | −0.0044 | 0.7553 | 0.030* | |
| H18C | 0.1189 | −0.1013 | 0.7241 | 0.030* | |
| C19 | 0.38326 (14) | −0.04045 (10) | 0.76210 (10) | 0.0184 (2) | |
| H19A | 0.4574 | −0.0258 | 0.8072 | 0.028* | |
| H19B | 0.4032 | −0.0080 | 0.7014 | 0.028* | |
| H19C | 0.3768 | −0.1125 | 0.7526 | 0.028* | |
| C20 | 0.41271 (13) | 0.13255 (10) | 0.95434 (9) | 0.0154 (2) | |
| H20A | 0.4805 | 0.1608 | 0.9104 | 0.023* | |
| H20B | 0.4242 | 0.0602 | 0.9570 | 0.023* | |
| H20C | 0.4267 | 0.1608 | 1.0177 | 0.023* |
| O1 | 0.0436 (6) | 0.0122 (4) | 0.0090 (3) | 0.0012 (5) | 0.0006 (4) | −0.0013 (3) |
| O2 | 0.0489 (6) | 0.0129 (4) | 0.0097 (3) | 0.0008 (5) | 0.0007 (4) | 0.0023 (3) |
| O3 | 0.0266 (4) | 0.0104 (4) | 0.0090 (3) | −0.0009 (4) | 0.0012 (3) | −0.0018 (3) |
| O4 | 0.0305 (5) | 0.0127 (4) | 0.0081 (3) | 0.0004 (4) | −0.0006 (4) | 0.0015 (3) |
| C1 | 0.0209 (5) | 0.0107 (5) | 0.0166 (5) | −0.0020 (4) | 0.0060 (4) | 0.0002 (4) |
| C2 | 0.0184 (5) | 0.0138 (5) | 0.0183 (5) | −0.0026 (4) | 0.0044 (4) | −0.0001 (4) |
| C3 | 0.0205 (5) | 0.0093 (5) | 0.0160 (5) | −0.0002 (4) | 0.0013 (4) | 0.0009 (4) |
| C4 | 0.0177 (5) | 0.0087 (4) | 0.0132 (4) | 0.0010 (4) | −0.0008 (4) | −0.0007 (3) |
| C5 | 0.0156 (5) | 0.0094 (4) | 0.0112 (4) | 0.0009 (5) | −0.0005 (4) | −0.0001 (3) |
| C6 | 0.0245 (5) | 0.0103 (5) | 0.0100 (4) | 0.0006 (5) | −0.0002 (4) | −0.0013 (3) |
| C7 | 0.0248 (6) | 0.0100 (4) | 0.0096 (4) | 0.0009 (5) | −0.0003 (4) | 0.0003 (3) |
| C8 | 0.0179 (5) | 0.0098 (4) | 0.0089 (4) | 0.0006 (5) | −0.0001 (4) | 0.0001 (3) |
| C9 | 0.0141 (4) | 0.0084 (4) | 0.0093 (4) | 0.0002 (4) | 0.0002 (4) | 0.0002 (3) |
| C10 | 0.0140 (4) | 0.0088 (4) | 0.0100 (4) | 0.0003 (4) | −0.0003 (4) | 0.0007 (3) |
| C11 | 0.0160 (5) | 0.0105 (4) | 0.0091 (4) | 0.0000 (5) | 0.0000 (4) | 0.0006 (3) |
| C12 | 0.0152 (5) | 0.0104 (4) | 0.0095 (4) | 0.0006 (5) | 0.0001 (4) | −0.0011 (3) |
| C13 | 0.0167 (4) | 0.0097 (4) | 0.0106 (4) | 0.0003 (4) | 0.0001 (4) | 0.0003 (3) |
| C14 | 0.0217 (5) | 0.0095 (4) | 0.0100 (4) | −0.0001 (5) | 0.0002 (4) | 0.0001 (3) |
| C15 | 0.0223 (5) | 0.0077 (4) | 0.0121 (4) | 0.0001 (5) | 0.0018 (4) | 0.0000 (3) |
| C16 | 0.0519 (10) | 0.0117 (5) | 0.0215 (6) | 0.0005 (6) | 0.0146 (6) | 0.0016 (5) |
| C17 | 0.0232 (6) | 0.0134 (5) | 0.0259 (6) | 0.0024 (5) | −0.0017 (5) | −0.0024 (5) |
| C18 | 0.0257 (6) | 0.0155 (6) | 0.0194 (5) | −0.0024 (5) | −0.0048 (5) | −0.0027 (5) |
| C19 | 0.0232 (6) | 0.0130 (5) | 0.0189 (5) | 0.0031 (5) | 0.0045 (5) | −0.0007 (4) |
| C20 | 0.0164 (5) | 0.0130 (5) | 0.0168 (5) | 0.0017 (4) | −0.0034 (4) | −0.0003 (4) |
| O1—C6 | 1.3733 (14) | C9—C11 | 1.3993 (15) |
| O1—H1O1 | 0.86 (2) | C9—C10 | 1.5307 (16) |
| O2—C7 | 1.2490 (14) | C10—C20 | 1.5626 (17) |
| O3—C12 | 1.3645 (13) | C11—C12 | 1.4081 (15) |
| O3—H1O3 | 0.8200 | C12—C13 | 1.3984 (15) |
| O4—C11 | 1.3685 (13) | C13—C14 | 1.3864 (15) |
| O4—H1O4 | 0.81 (2) | C13—C15 | 1.5237 (16) |
| C1—C2 | 1.5268 (18) | C14—H14A | 0.9300 |
| C1—C10 | 1.5619 (17) | C15—C16 | 1.5222 (18) |
| C1—H1A | 0.9700 | C15—C17 | 1.5362 (19) |
| C1—H1B | 0.9700 | C15—H15A | 0.9800 |
| C2—C3 | 1.5242 (18) | C16—H16A | 0.9600 |
| C2—H2A | 0.9700 | C16—H16B | 0.9600 |
| C2—H2B | 0.9700 | C16—H16C | 0.9600 |
| C3—C4 | 1.5462 (17) | C17—H17A | 0.9600 |
| C3—H3A | 0.9700 | C17—H17B | 0.9600 |
| C3—H3B | 0.9700 | C17—H17C | 0.9600 |
| C4—C5 | 1.5378 (16) | C18—H18A | 0.9600 |
| C4—C19 | 1.5444 (19) | C18—H18B | 0.9600 |
| C4—C18 | 1.5504 (18) | C18—H18C | 0.9600 |
| C5—C6 | 1.3562 (16) | C19—H19A | 0.9600 |
| C5—C10 | 1.5240 (15) | C19—H19B | 0.9600 |
| C6—C7 | 1.4600 (16) | C19—H19C | 0.9600 |
| C7—C8 | 1.4542 (15) | C20—H20A | 0.9600 |
| C8—C14 | 1.4020 (15) | C20—H20B | 0.9600 |
| C8—C9 | 1.4025 (14) | C20—H20C | 0.9600 |
| C6—O1—H1O1 | 103.0 (15) | O4—C11—C9 | 121.14 (10) |
| C12—O3—H1O3 | 109.5 | O4—C11—C12 | 117.47 (9) |
| C11—O4—H1O4 | 99.1 (16) | C9—C11—C12 | 121.39 (10) |
| C2—C1—C10 | 114.88 (10) | O3—C12—C13 | 125.37 (10) |
| C2—C1—H1A | 108.5 | O3—C12—C11 | 112.74 (9) |
| C10—C1—H1A | 108.5 | C13—C12—C11 | 121.88 (10) |
| C2—C1—H1B | 108.5 | C14—C13—C12 | 116.71 (10) |
| C10—C1—H1B | 108.5 | C14—C13—C15 | 122.37 (10) |
| H1A—C1—H1B | 107.5 | C12—C13—C15 | 120.91 (10) |
| C3—C2—C1 | 112.14 (11) | C13—C14—C8 | 121.63 (10) |
| C3—C2—H2A | 109.2 | C13—C14—H14A | 119.2 |
| C1—C2—H2A | 109.2 | C8—C14—H14A | 119.2 |
| C3—C2—H2B | 109.2 | C16—C15—C13 | 112.76 (10) |
| C1—C2—H2B | 109.2 | C16—C15—C17 | 111.02 (12) |
| H2A—C2—H2B | 107.9 | C13—C15—C17 | 110.34 (11) |
| C2—C3—C4 | 110.58 (10) | C16—C15—H15A | 107.5 |
| C2—C3—H3A | 109.5 | C13—C15—H15A | 107.5 |
| C4—C3—H3A | 109.5 | C17—C15—H15A | 107.5 |
| C2—C3—H3B | 109.5 | C15—C16—H16A | 109.5 |
| C4—C3—H3B | 109.5 | C15—C16—H16B | 109.5 |
| H3A—C3—H3B | 108.1 | H16A—C16—H16B | 109.5 |
| C5—C4—C19 | 110.25 (11) | C15—C16—H16C | 109.5 |
| C5—C4—C3 | 110.69 (9) | H16A—C16—H16C | 109.5 |
| C19—C4—C3 | 109.72 (10) | H16B—C16—H16C | 109.5 |
| C5—C4—C18 | 110.63 (10) | C15—C17—H17A | 109.5 |
| C19—C4—C18 | 108.68 (10) | C15—C17—H17B | 109.5 |
| C3—C4—C18 | 106.80 (10) | H17A—C17—H17B | 109.5 |
| C6—C5—C10 | 119.99 (10) | C15—C17—H17C | 109.5 |
| C6—C5—C4 | 120.81 (10) | H17A—C17—H17C | 109.5 |
| C10—C5—C4 | 118.97 (9) | H17B—C17—H17C | 109.5 |
| C5—C6—O1 | 123.23 (11) | C4—C18—H18A | 109.5 |
| C5—C6—C7 | 123.79 (10) | C4—C18—H18B | 109.5 |
| O1—C6—C7 | 112.98 (10) | H18A—C18—H18B | 109.5 |
| O2—C7—C8 | 124.11 (10) | C4—C18—H18C | 109.5 |
| O2—C7—C6 | 116.73 (10) | H18A—C18—H18C | 109.5 |
| C8—C7—C6 | 119.15 (10) | H18B—C18—H18C | 109.5 |
| C14—C8—C9 | 122.20 (10) | C4—C19—H19A | 109.5 |
| C14—C8—C7 | 118.51 (10) | C4—C19—H19B | 109.5 |
| C9—C8—C7 | 119.25 (10) | H19A—C19—H19B | 109.5 |
| C11—C9—C8 | 116.10 (10) | C4—C19—H19C | 109.5 |
| C11—C9—C10 | 121.16 (9) | H19A—C19—H19C | 109.5 |
| C8—C9—C10 | 122.62 (9) | H19B—C19—H19C | 109.5 |
| C5—C10—C9 | 114.30 (9) | C10—C20—H20A | 109.5 |
| C5—C10—C1 | 110.80 (10) | C10—C20—H20B | 109.5 |
| C9—C10—C1 | 109.83 (9) | H20A—C20—H20B | 109.5 |
| C5—C10—C20 | 106.26 (10) | C10—C20—H20C | 109.5 |
| C9—C10—C20 | 104.61 (10) | H20A—C20—H20C | 109.5 |
| C1—C10—C20 | 110.81 (9) | H20B—C20—H20C | 109.5 |
| C10—C1—C2—C3 | 29.06 (15) | C6—C5—C10—C20 | −103.51 (13) |
| C1—C2—C3—C4 | −65.02 (14) | C4—C5—C10—C20 | 71.15 (14) |
| C2—C3—C4—C5 | 41.24 (14) | C11—C9—C10—C5 | 176.26 (11) |
| C2—C3—C4—C19 | 163.14 (10) | C8—C9—C10—C5 | −7.91 (17) |
| C2—C3—C4—C18 | −79.24 (12) | C11—C9—C10—C1 | 51.02 (15) |
| C19—C4—C5—C6 | 68.23 (16) | C8—C9—C10—C1 | −133.15 (12) |
| C3—C4—C5—C6 | −170.18 (12) | C11—C9—C10—C20 | −67.95 (14) |
| C18—C4—C5—C6 | −52.01 (17) | C8—C9—C10—C20 | 107.89 (13) |
| C19—C4—C5—C10 | −106.38 (12) | C2—C1—C10—C5 | 25.02 (15) |
| C3—C4—C5—C10 | 15.20 (16) | C2—C1—C10—C9 | 152.24 (11) |
| C18—C4—C5—C10 | 133.38 (11) | C2—C1—C10—C20 | −92.68 (13) |
| C10—C5—C6—O1 | 171.98 (12) | C8—C9—C11—O4 | −177.87 (12) |
| C4—C5—C6—O1 | −2.6 (2) | C10—C9—C11—O4 | −1.77 (19) |
| C10—C5—C6—C7 | −8.9 (2) | C8—C9—C11—C12 | 2.54 (19) |
| C4—C5—C6—C7 | 176.56 (13) | C10—C9—C11—C12 | 178.63 (11) |
| C5—C6—C7—O2 | −177.17 (14) | O4—C11—C12—O3 | −2.26 (19) |
| O1—C6—C7—O2 | 2.0 (2) | C9—C11—C12—O3 | 177.35 (11) |
| C5—C6—C7—C8 | 2.0 (2) | O4—C11—C12—C13 | 176.62 (11) |
| O1—C6—C7—C8 | −178.82 (12) | C9—C11—C12—C13 | −3.8 (2) |
| O2—C7—C8—C14 | −1.2 (2) | O3—C12—C13—C14 | −178.94 (13) |
| C6—C7—C8—C14 | 179.71 (13) | C11—C12—C13—C14 | 2.33 (19) |
| O2—C7—C8—C9 | −179.12 (14) | O3—C12—C13—C15 | 1.0 (2) |
| C6—C7—C8—C9 | 1.8 (2) | C11—C12—C13—C15 | −177.76 (12) |
| C14—C8—C9—C11 | −0.13 (19) | C12—C13—C14—C8 | 0.1 (2) |
| C7—C8—C9—C11 | 177.69 (12) | C15—C13—C14—C8 | −179.81 (13) |
| C14—C8—C9—C10 | −176.16 (12) | C9—C8—C14—C13 | −1.2 (2) |
| C7—C8—C9—C10 | 1.66 (19) | C7—C8—C14—C13 | −179.04 (12) |
| C6—C5—C10—C9 | 11.32 (18) | C14—C13—C15—C16 | −25.4 (2) |
| C4—C5—C10—C9 | −174.02 (10) | C12—C13—C15—C16 | 154.74 (13) |
| C6—C5—C10—C1 | 136.05 (13) | C14—C13—C15—C17 | 99.41 (15) |
| C4—C5—C10—C1 | −49.30 (15) | C12—C13—C15—C17 | −80.49 (15) |
| H··· | ||||
| O1—H1O1···O2 | 0.86 (2) | 1.97 (2) | 2.5626 (13) | 124.5 (19) |
| O3—H1O3···O2i | 0.82 | 1.93 | 2.7008 (13) | 156 |
| O4—H1O4···O3 | 0.81 (2) | 1.96 (2) | 2.5677 (13) | 131 (2) |
| C14—H14A···O3ii | 0.93 | 2.57 | 3.4712 (14) | 163 |
| C15—H15A···O2i | 0.98 | 2.45 | 3.1908 (14) | 132 |
| C18—H18A···O1 | 0.96 | 2.24 | 2.9053 (18) | 125 |
| C19—H19B···O1 | 0.96 | 2.53 | 3.1360 (17) | 121 |
| C20—H20C···O4 | 0.96 | 2.44 | 3.0838 (16) | 124 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.86 (2) | 1.97 (2) | 2.5626 (13) | 124.5 (19) |
| O3—H1 | 0.82 | 1.93 | 2.7008 (13) | 156 |
| O4—H1 | 0.81 (2) | 1.96 (2) | 2.5677 (13) | 131 (2) |
| C14—H14 | 0.93 | 2.57 | 3.4712 (14) | 163 |
| C15—H15 | 0.98 | 2.45 | 3.1908 (14) | 132 |
| C18—H18 | 0.96 | 2.24 | 2.9053 (18) | 125 |
| C19—H19 | 0.96 | 2.53 | 3.1360 (17) | 121 |
| C20—H20 | 0.96 | 2.44 | 3.0838 (16) | 124 |
Symmetry codes: (i) ; (ii) .