Literature DB >> 21577827

2-(3-Oxo-3,4-dihydro-2H-1,4-benzo-thia-zin-4-yl)acetic acid monohydrate.

Hoong-Kun Fun, Wan-Sin Loh, G Janardhana, A M A Khader, B Kalluraya.   

Abstract

In the title compound, C(10)H(9)NO(3)S·H(2)O, the thio-morpholine ring exists in a conformation inter-mediate between twist-boat and half-chair. An inter-molecular O-H⋯O hydrogen bond links the acid and water mol-ecules together. In the crystal packing, inter-molecular O-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network.

Entities:  

Year:  2009        PMID: 21577827      PMCID: PMC2970497          DOI: 10.1107/S1600536809034977

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of 4H-benzo(1,4)thia­zine, see: Armenise et al. (1991 ▶); Gupta et al. (1993 ▶); Fringuelli et al. (2005 ▶). For medical applications of sulfone derivatives of 4H-benzo(1,4)thia­zine, see: Shinji & Koshiro (1995 ▶); Szule et al. (1988 ▶); Culbertson (1991 ▶). For a related structure, see: Zhang et al. (2008 ▶). For bond-length data, see: Allen et al. (1987 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C10H9NO3S·H2O M = 241.26 Monoclinic, a = 7.5897 (1) Å b = 9.2208 (2) Å c = 15.6701 (3) Å β = 94.336 (1)° V = 1093.50 (3) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 100 K 0.49 × 0.34 × 0.11 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.870, T max = 0.969 25955 measured reflections 4859 independent reflections 3833 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.128 S = 0.83 4859 reflections 157 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809034977/sj2641sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034977/sj2641Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9NO3S·H2OF(000) = 504
Mr = 241.26Dx = 1.465 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7672 reflections
a = 7.5897 (1) Åθ = 3.4–33.1°
b = 9.2208 (2) ŵ = 0.29 mm1
c = 15.6701 (3) ÅT = 100 K
β = 94.336 (1)°Block, colourless
V = 1093.50 (3) Å30.49 × 0.34 × 0.11 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer4859 independent reflections
Radiation source: fine-focus sealed tube3833 reflections with I > 2σ(I)
graphiteRint = 0.036
φ and ω scansθmax = 35.1°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −12→12
Tmin = 0.870, Tmax = 0.969k = −14→13
25955 measured reflectionsl = −23→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H atoms treated by a mixture of independent and constrained refinement
S = 0.83w = 1/[σ2(Fo2) + (0.0915P)2 + 0.3956P] where P = (Fo2 + 2Fc2)/3
4859 reflections(Δ/σ)max = 0.001?
157 parametersΔρmax = 0.54 e Å3
0 restraintsΔρmin = −0.26 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.25290 (3)0.20298 (3)0.368735 (18)0.02391 (8)
O1W0.17478 (12)0.72939 (10)0.31220 (6)0.02515 (17)
O10.47141 (12)0.56427 (9)0.33767 (6)0.02699 (18)
O20.94362 (11)0.62615 (9)0.40417 (6)0.02360 (16)
O30.90204 (12)0.44113 (9)0.31220 (6)0.02548 (17)
C10.46033 (14)0.11958 (11)0.38793 (6)0.01900 (18)
C20.47444 (16)−0.03074 (12)0.39590 (7)0.0233 (2)
H2A0.3733−0.08790.39000.028*
C30.63845 (17)−0.09543 (12)0.41263 (7)0.0247 (2)
H3A0.6469−0.19550.41930.030*
C40.78984 (16)−0.01067 (12)0.41946 (7)0.0246 (2)
H4A0.8999−0.05440.42960.030*
C50.77815 (14)0.13934 (12)0.41127 (7)0.02197 (19)
H5A0.88010.19560.41560.026*
C60.61270 (13)0.20523 (11)0.39649 (6)0.01770 (17)
N10.59863 (11)0.35987 (9)0.39215 (6)0.01904 (16)
C70.46962 (14)0.43038 (12)0.34290 (7)0.02067 (19)
C80.32911 (14)0.33868 (13)0.29697 (7)0.0234 (2)
H8A0.37640.29180.24820.028*
H8B0.23090.39950.27600.028*
C90.73286 (14)0.45083 (11)0.43631 (7)0.02047 (18)
H9A0.79340.39590.48250.025*
H9B0.67640.53330.46130.025*
C100.86713 (13)0.50482 (11)0.37642 (7)0.01941 (18)
H1O21.028 (3)0.652 (3)0.3672 (15)0.064 (7)*
H2W10.155 (3)0.784 (2)0.2691 (15)0.056 (6)*
H1W10.270 (3)0.672 (2)0.3095 (13)0.043 (5)*
U11U22U33U12U13U23
S10.01398 (12)0.03081 (15)0.02713 (14)−0.00430 (9)0.00291 (9)0.00246 (9)
O1W0.0185 (4)0.0229 (4)0.0340 (4)0.0004 (3)0.0017 (3)0.0072 (3)
O10.0224 (4)0.0214 (4)0.0371 (5)0.0033 (3)0.0020 (3)0.0071 (3)
O20.0222 (4)0.0184 (3)0.0304 (4)−0.0051 (3)0.0030 (3)−0.0026 (3)
O30.0231 (4)0.0232 (4)0.0306 (4)−0.0046 (3)0.0049 (3)−0.0046 (3)
C10.0179 (4)0.0209 (4)0.0184 (4)−0.0039 (3)0.0028 (3)−0.0002 (3)
C20.0279 (5)0.0217 (5)0.0208 (4)−0.0064 (4)0.0046 (4)−0.0016 (3)
C30.0358 (6)0.0175 (4)0.0211 (4)−0.0004 (4)0.0050 (4)−0.0006 (3)
C40.0264 (5)0.0226 (5)0.0251 (5)0.0052 (4)0.0030 (4)0.0020 (4)
C50.0169 (4)0.0206 (4)0.0284 (5)0.0016 (3)0.0019 (3)0.0028 (4)
C60.0162 (4)0.0169 (4)0.0201 (4)−0.0009 (3)0.0022 (3)0.0013 (3)
N10.0136 (3)0.0176 (4)0.0256 (4)−0.0004 (3)−0.0006 (3)0.0029 (3)
C70.0150 (4)0.0233 (5)0.0239 (4)0.0020 (3)0.0027 (3)0.0048 (3)
C80.0169 (4)0.0296 (5)0.0233 (5)−0.0003 (4)−0.0008 (3)0.0047 (4)
C90.0172 (4)0.0196 (4)0.0243 (4)−0.0020 (3)−0.0001 (3)0.0002 (3)
C100.0147 (4)0.0169 (4)0.0262 (5)0.0000 (3)−0.0009 (3)0.0000 (3)
S1—C11.7575 (11)C4—C51.3914 (16)
S1—C81.8064 (12)C4—H4A0.9300
O1W—H2W10.85 (2)C5—C61.3984 (15)
O1W—H1W10.90 (2)C5—H5A0.9300
O1—C71.2374 (13)C6—N11.4311 (13)
O2—C101.3189 (13)N1—C71.3648 (13)
O2—H1O20.93 (3)N1—C91.4539 (13)
O3—C101.2116 (14)C7—C81.5014 (16)
C1—C21.3951 (15)C8—H8A0.9700
C1—C61.3985 (14)C8—H8B0.9700
C2—C31.3873 (17)C9—C101.5205 (16)
C2—H2A0.9300C9—H9A0.9700
C3—C41.3871 (17)C9—H9B0.9700
C3—H3A0.9300
C1—S1—C894.86 (5)C7—N1—C6123.32 (9)
H2W1—O1W—H1W1114 (2)C7—N1—C9116.19 (8)
C10—O2—H1O2108.8 (14)C6—N1—C9120.33 (8)
C2—C1—C6119.68 (10)O1—C7—N1120.11 (10)
C2—C1—S1120.78 (8)O1—C7—C8122.76 (10)
C6—C1—S1119.53 (8)N1—C7—C8117.12 (9)
C3—C2—C1120.38 (10)C7—C8—S1109.94 (7)
C3—C2—H2A119.8C7—C8—H8A109.7
C1—C2—H2A119.8S1—C8—H8A109.7
C4—C3—C2119.90 (10)C7—C8—H8B109.7
C4—C3—H3A120.0S1—C8—H8B109.7
C2—C3—H3A120.0H8A—C8—H8B108.2
C3—C4—C5120.42 (11)N1—C9—C10111.92 (9)
C3—C4—H4A119.8N1—C9—H9A109.2
C5—C4—H4A119.8C10—C9—H9A109.2
C4—C5—C6119.83 (10)N1—C9—H9B109.2
C4—C5—H5A120.1C10—C9—H9B109.2
C6—C5—H5A120.1H9A—C9—H9B107.9
C1—C6—C5119.75 (9)O3—C10—O2124.51 (10)
C1—C6—N1119.99 (9)O3—C10—C9123.56 (9)
C5—C6—N1120.24 (9)O2—C10—C9111.90 (9)
C8—S1—C1—C2−142.00 (9)C5—C6—N1—C7149.31 (11)
C8—S1—C1—C638.91 (9)C1—C6—N1—C9152.60 (10)
C6—C1—C2—C30.30 (16)C5—C6—N1—C9−25.91 (14)
S1—C1—C2—C3−178.80 (8)C6—N1—C7—O1−175.33 (10)
C1—C2—C3—C4−1.55 (16)C9—N1—C7—O10.07 (15)
C2—C3—C4—C51.24 (17)C6—N1—C7—C84.85 (15)
C3—C4—C5—C60.33 (17)C9—N1—C7—C8−179.75 (9)
C2—C1—C6—C51.27 (15)O1—C7—C8—S1−134.43 (10)
S1—C1—C6—C5−179.63 (8)N1—C7—C8—S145.39 (12)
C2—C1—C6—N1−177.25 (9)C1—S1—C8—C7−60.65 (8)
S1—C1—C6—N11.86 (13)C7—N1—C9—C10−77.23 (12)
C4—C5—C6—C1−1.58 (16)C6—N1—C9—C1098.32 (11)
C4—C5—C6—N1176.93 (10)N1—C9—C10—O3−26.48 (14)
C1—C6—N1—C7−32.18 (15)N1—C9—C10—O2155.33 (9)
D—H···AD—HH···AD···AD—H···A
O2—H1O2···O1Wi0.93 (2)1.62 (2)2.5384 (13)168 (3)
O1W—H2W1···O3ii0.85 (2)1.96 (2)2.7893 (13)168 (2)
O1W—H1W1···O10.90 (2)1.85 (2)2.7221 (13)163.4 (19)
C2—H2A···O1Wiii0.932.513.3666 (15)153
C9—H9A···O2iv0.972.583.4429 (14)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H1O2⋯O1Wi0.93 (2)1.62 (2)2.5384 (13)168 (3)
O1W—H2W1⋯O3ii0.85 (2)1.96 (2)2.7893 (13)168 (2)
O1W—H1W1⋯O10.90 (2)1.85 (2)2.7221 (13)163.4 (19)
C2—H2A⋯O1Wiii0.932.513.3666 (15)153
C9—H9A⋯O2iv0.972.583.4429 (14)149

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  7 in total

Review 1.  Role of 1,4-benzothiazine derivatives in medicinal chemistry.

Authors:  R Fringuelli; L Milanese; F Schiaffella
Journal:  Mini Rev Med Chem       Date:  2005-12       Impact factor: 3.862

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Anticancer activities of 2,3-dihydro-1,4-benzothiazines, and of their 4-(N-alkyl amides) and 4-(N-alkyl N-nitrosoamides).

Authors:  R R Gupta; P K Dev; M L Sharma; C M Rajoria; A Gupta; M Nyati
Journal:  Anticancer Drugs       Date:  1993-10       Impact factor: 2.248

4.  2-(4-Chloro-benzoyl-meth-yl)-2H-1,4-benzothia-zin-3(4H)-one.

Authors:  Ping Zhang; Na Du; Lan-Zhi Wang; Yuan Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-29

5.  Preparation of potentially bioactive aza and thiaza polycyclic compounds containing a bridgehead nitrogen atom synthesis and antimicrobial activity of some pyrrolo[1,2,3-de]-1,4-benzothiazines.

Authors:  D Armenise; G Trapani; V Arrivo; F Morlacchi
Journal:  Farmaco       Date:  1991-09

6.  Protein binding of chlorpromazine in vivo and in vitro: effect of chlorpromazine metabolite on chlorpromazine protein binding in rat.

Authors:  S Sato; A Koshiro
Journal:  Biol Pharm Bull       Date:  1995-04       Impact factor: 2.233

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  1 in total

1.  4-(1H-Benzimidazol-2-ylmeth-yl)-2H-1,4-benzothia-zin-3(4H)-one.

Authors:  Hoong-Kun Fun; Mohd Mustaqim Rosli; Janardhana Gowda; A M A Khader; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-29
  1 in total

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