| Literature DB >> 21577801 |
Matías López-Rodríguez, Matías Reina, D M Domínguez-Díaz, V Fajardo, L Villarroel.
Abstract
THE TITLE COMPOUND (SYSTEMATIC NAME: 9a-hydr-oxy-3,4a,5-trimethyl-4a,6,7,8a,9,9a-hexa-hydro-4H,5H-naphtho[2,3-b]furan-2,8-dione), C(15)H(20)O(4), is a sesquiterpene lactone showing the typical eremophilanolide skeleton, which has been isolated from the plant Senecio candidans collected in the Chilean Magallanes region. The present study confirms the atomic connectivity assigned on the basis of (1)H and (13)C NMR spectroscopy, as well as the relative stereochemistry of the 4α-methyl,5α-methyl,8β-hydr-oxy,10β-H unit. The crystal structure is stabilized by inter-molecular O-H⋯O hydrogen bonds involving the hydr-oxy group as donor and the oxo group as acceptor, giving chains along the a axis. The absolute structure was not determined because of the lack of suitable anomalous scatters.Entities:
Year: 2009 PMID: 21577801 PMCID: PMC2970221 DOI: 10.1107/S1600536809033418
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H20O4 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 297 reflections |
| θ = 4.3–23.7° | |
| µ = 0.09 mm−1 | |
| β = 115.47 (4)° | Block, colourless |
| 0.45 × 0.35 × 0.25 mm | |
| Enraf–Nonius KappaCCD diffractometer | 1485 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 6.4° |
| Detector resolution: 9 pixels mm-1 | |
| φ and ω scans | |
| 4410 measured reflections | |
| 1678 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1678 reflections | (Δ/σ)max = 0.001 |
| 186 parameters | Δρmax = 0.20 e Å−3 |
| 1 restraint | Δρmin = −0.11 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.4955 (3) | 0.50383 (14) | 0.8319 (2) | 0.0568 (5) | |
| O2 | 0.5421 (4) | 0.5731 (2) | 0.6018 (3) | 0.0869 (7) | |
| O3 | 0.6082 (2) | 0.37119 (15) | 1.04064 (19) | 0.0521 (4) | |
| H3 | 0.713 (5) | 0.354 (3) | 1.018 (4) | 0.079 (9)* | |
| O4 | −0.0560 (2) | 0.35876 (16) | 0.9801 (3) | 0.0635 (5) | |
| C1 | 0.0324 (3) | 0.28290 (19) | 0.9675 (3) | 0.0456 (5) | |
| C2 | −0.0216 (4) | 0.1763 (2) | 0.9971 (4) | 0.0635 (7) | |
| H2A | −0.1422 | 0.1778 | 1.0153 | 0.079 (9)* | |
| H2B | 0.0844 | 0.1476 | 1.1053 | 0.073 (9)* | |
| C3 | −0.0542 (4) | 0.1087 (2) | 0.8333 (4) | 0.0643 (7) | |
| H3A | −0.1759 | 0.1299 | 0.7312 | 0.074 (9)* | |
| H3B | −0.0713 | 0.0379 | 0.8615 | 0.059 (8)* | |
| C4 | 0.1189 (4) | 0.11441 (18) | 0.7792 (3) | 0.0518 (6) | |
| H4 | 0.2377 | 0.0891 | 0.8827 | 0.059 (7)* | |
| C5 | 0.1632 (3) | 0.22659 (16) | 0.7435 (3) | 0.0375 (4) | |
| C6 | 0.3567 (3) | 0.22904 (18) | 0.7137 (3) | 0.0448 (5) | |
| H6A | 0.4602 | 0.1896 | 0.8084 | 0.057 (7)* | |
| H6B | 0.3309 | 0.1977 | 0.5979 | 0.050 (7)* | |
| C7 | 0.4259 (3) | 0.33673 (18) | 0.7168 (3) | 0.0422 (5) | |
| C8 | 0.4541 (3) | 0.40177 (17) | 0.8797 (3) | 0.0412 (5) | |
| C9 | 0.2648 (3) | 0.40183 (17) | 0.9078 (3) | 0.0407 (5) | |
| H9A | 0.1589 | 0.4368 | 0.8076 | 0.036 (5)* | |
| H9B | 0.2875 | 0.4377 | 1.0192 | 0.043 (6)* | |
| C10 | 0.2059 (3) | 0.29068 (16) | 0.9181 (3) | 0.0372 (4) | |
| H10 | 0.3200 | 0.2583 | 1.0170 | 0.044 (6)* | |
| C11 | 0.4554 (3) | 0.3931 (2) | 0.5961 (3) | 0.0488 (6) | |
| C12 | 0.5040 (4) | 0.4988 (3) | 0.6676 (4) | 0.0588 (6) | |
| C13 | 0.4395 (4) | 0.3664 (3) | 0.4119 (3) | 0.0668 (8) | |
| H13A | 0.5521 | 0.3940 | 0.3982 | 0.090* | |
| H13B | 0.3190 | 0.3950 | 0.3207 | 0.090* | |
| H13C | 0.4374 | 0.2930 | 0.3988 | 0.090* | |
| C14 | −0.0102 (3) | 0.27228 (19) | 0.5782 (3) | 0.0512 (5) | |
| H14A | 0.0173 | 0.3431 | 0.5648 | 0.090* | |
| H14B | −0.1303 | 0.2676 | 0.5947 | 0.090* | |
| H14C | −0.0266 | 0.2348 | 0.4713 | 0.090* | |
| C15 | 0.0800 (5) | 0.0415 (2) | 0.6210 (5) | 0.0771 (9) | |
| H15A | 0.1886 | 0.0454 | 0.5872 | 0.090* | |
| H15B | −0.0415 | 0.0607 | 0.5195 | 0.090* | |
| H15C | 0.0685 | −0.0276 | 0.6569 | 0.090* |
| O1 | 0.0612 (10) | 0.0542 (10) | 0.0633 (10) | −0.0224 (8) | 0.0348 (8) | −0.0122 (8) |
| O2 | 0.0968 (16) | 0.0837 (16) | 0.0944 (16) | −0.0249 (13) | 0.0548 (14) | 0.0156 (13) |
| O3 | 0.0339 (7) | 0.0817 (12) | 0.0434 (7) | −0.0078 (8) | 0.0194 (6) | −0.0091 (8) |
| O4 | 0.0465 (9) | 0.0680 (12) | 0.0928 (12) | −0.0034 (9) | 0.0460 (9) | −0.0125 (10) |
| C1 | 0.0355 (10) | 0.0562 (14) | 0.0480 (11) | −0.0048 (10) | 0.0208 (9) | −0.0015 (11) |
| C2 | 0.0559 (14) | 0.0680 (18) | 0.0766 (17) | −0.0052 (13) | 0.0378 (13) | 0.0159 (15) |
| C3 | 0.0604 (15) | 0.0452 (14) | 0.0848 (18) | −0.0128 (12) | 0.0289 (14) | 0.0092 (14) |
| C4 | 0.0517 (12) | 0.0354 (11) | 0.0592 (13) | 0.0019 (10) | 0.0153 (11) | 0.0043 (11) |
| C5 | 0.0343 (9) | 0.0339 (10) | 0.0398 (9) | 0.0004 (8) | 0.0118 (8) | −0.0005 (9) |
| C6 | 0.0463 (11) | 0.0476 (12) | 0.0440 (10) | 0.0054 (10) | 0.0228 (9) | −0.0063 (10) |
| C7 | 0.0325 (9) | 0.0558 (13) | 0.0408 (10) | −0.0020 (9) | 0.0183 (8) | −0.0071 (10) |
| C8 | 0.0384 (10) | 0.0472 (12) | 0.0423 (10) | −0.0099 (9) | 0.0213 (8) | −0.0077 (9) |
| C9 | 0.0367 (9) | 0.0430 (12) | 0.0488 (11) | −0.0050 (8) | 0.0244 (9) | −0.0109 (9) |
| C10 | 0.0282 (8) | 0.0438 (11) | 0.0407 (10) | 0.0015 (8) | 0.0161 (7) | 0.0002 (9) |
| C11 | 0.0378 (10) | 0.0703 (16) | 0.0414 (10) | −0.0015 (10) | 0.0201 (8) | 0.0010 (11) |
| C12 | 0.0495 (13) | 0.0745 (18) | 0.0584 (13) | −0.0133 (12) | 0.0290 (11) | 0.0039 (13) |
| C13 | 0.0641 (14) | 0.099 (2) | 0.0423 (11) | −0.0002 (16) | 0.0278 (11) | 0.0043 (14) |
| C14 | 0.0465 (12) | 0.0464 (13) | 0.0465 (11) | 0.0016 (10) | 0.0066 (9) | 0.0057 (11) |
| C15 | 0.089 (2) | 0.0412 (14) | 0.093 (2) | −0.0098 (14) | 0.0316 (18) | −0.0157 (14) |
| O1—C12 | 1.371 (3) | C6—H6A | 0.9700 |
| O1—C8 | 1.454 (3) | C6—H6B | 0.9700 |
| O2—C12 | 1.198 (4) | C7—C11 | 1.320 (3) |
| O3—C8 | 1.379 (3) | C7—C8 | 1.512 (3) |
| O3—H3 | 0.90 (4) | C8—C9 | 1.519 (3) |
| O4—C1 | 1.214 (3) | C9—C10 | 1.524 (3) |
| C1—C2 | 1.493 (4) | C9—H9A | 0.9700 |
| C1—C10 | 1.511 (3) | C9—H9B | 0.9700 |
| C2—C3 | 1.530 (4) | C10—H10 | 0.9800 |
| C2—H2A | 0.9700 | C11—C12 | 1.477 (4) |
| C2—H2B | 0.9700 | C11—C13 | 1.497 (3) |
| C3—C4 | 1.532 (4) | C13—H13A | 0.9600 |
| C3—H3A | 0.9700 | C13—H13B | 0.9600 |
| C3—H3B | 0.9700 | C13—H13C | 0.9600 |
| C4—C15 | 1.526 (4) | C14—H14A | 0.9600 |
| C4—C5 | 1.551 (3) | C14—H14B | 0.9600 |
| C4—H4 | 0.9800 | C14—H14C | 0.9600 |
| C5—C14 | 1.529 (3) | C15—H15A | 0.9600 |
| C5—C6 | 1.558 (3) | C15—H15B | 0.9600 |
| C5—C10 | 1.561 (3) | C15—H15C | 0.9600 |
| C6—C7 | 1.489 (3) | ||
| C12—O1—C8 | 108.86 (19) | O1—C8—C7 | 103.91 (17) |
| C8—O3—H3 | 108 (2) | O3—C8—C9 | 107.47 (17) |
| O4—C1—C2 | 123.30 (19) | O1—C8—C9 | 110.88 (18) |
| O4—C1—C10 | 121.5 (2) | C7—C8—C9 | 110.20 (16) |
| C2—C1—C10 | 115.2 (2) | C8—C9—C10 | 108.33 (16) |
| C1—C2—C3 | 110.2 (2) | C8—C9—H9A | 110.0 |
| C1—C2—H2A | 109.6 | C10—C9—H9A | 110.0 |
| C3—C2—H2A | 109.6 | C8—C9—H9B | 110.0 |
| C1—C2—H2B | 109.6 | C10—C9—H9B | 110.0 |
| C3—C2—H2B | 109.6 | H9A—C9—H9B | 108.4 |
| H2A—C2—H2B | 108.1 | C1—C10—C9 | 112.13 (17) |
| C2—C3—C4 | 112.8 (2) | C1—C10—C5 | 110.24 (17) |
| C2—C3—H3A | 109.0 | C9—C10—C5 | 114.02 (16) |
| C4—C3—H3A | 109.0 | C1—C10—H10 | 106.7 |
| C2—C3—H3B | 109.0 | C9—C10—H10 | 106.7 |
| C4—C3—H3B | 109.0 | C5—C10—H10 | 106.7 |
| H3A—C3—H3B | 107.8 | C7—C11—C12 | 108.2 (2) |
| C15—C4—C3 | 109.7 (2) | C7—C11—C13 | 130.8 (3) |
| C15—C4—C5 | 113.8 (2) | C12—C11—C13 | 120.9 (2) |
| C3—C4—C5 | 111.89 (19) | O2—C12—O1 | 121.3 (3) |
| C15—C4—H4 | 107.0 | O2—C12—C11 | 129.7 (2) |
| C3—C4—H4 | 107.0 | O1—C12—C11 | 108.9 (2) |
| C5—C4—H4 | 107.0 | C11—C13—H13A | 109.5 |
| C14—C5—C4 | 111.40 (18) | C11—C13—H13B | 109.5 |
| C14—C5—C6 | 109.80 (18) | H13A—C13—H13B | 109.5 |
| C4—C5—C6 | 109.48 (18) | C11—C13—H13C | 109.5 |
| C14—C5—C10 | 111.15 (18) | H13A—C13—H13C | 109.5 |
| C4—C5—C10 | 107.89 (17) | H13B—C13—H13C | 109.5 |
| C6—C5—C10 | 106.99 (16) | C5—C14—H14A | 109.5 |
| C7—C6—C5 | 110.60 (17) | C5—C14—H14B | 109.5 |
| C7—C6—H6A | 109.5 | H14A—C14—H14B | 109.5 |
| C5—C6—H6A | 109.5 | C5—C14—H14C | 109.5 |
| C7—C6—H6B | 109.5 | H14A—C14—H14C | 109.5 |
| C5—C6—H6B | 109.5 | H14B—C14—H14C | 109.5 |
| H6A—C6—H6B | 108.1 | C4—C15—H15A | 109.5 |
| C11—C7—C6 | 132.6 (2) | C4—C15—H15B | 109.5 |
| C11—C7—C8 | 109.9 (2) | H15A—C15—H15B | 109.5 |
| C6—C7—C8 | 117.24 (18) | C4—C15—H15C | 109.5 |
| O3—C8—O1 | 109.53 (17) | H15A—C15—H15C | 109.5 |
| O3—C8—C7 | 114.85 (19) | H15B—C15—H15C | 109.5 |
| O4—C1—C2—C3 | 126.2 (3) | O3—C8—C9—C10 | −72.0 (2) |
| C10—C1—C2—C3 | −53.2 (3) | O1—C8—C9—C10 | 168.34 (16) |
| C1—C2—C3—C4 | 51.1 (3) | C7—C8—C9—C10 | 53.8 (2) |
| C2—C3—C4—C15 | 177.4 (2) | O4—C1—C10—C9 | 6.0 (3) |
| C2—C3—C4—C5 | −55.3 (3) | C2—C1—C10—C9 | −174.5 (2) |
| C15—C4—C5—C14 | 59.4 (3) | O4—C1—C10—C5 | −122.1 (2) |
| C3—C4—C5—C14 | −65.6 (3) | C2—C1—C10—C5 | 57.3 (2) |
| C15—C4—C5—C6 | −62.2 (3) | C8—C9—C10—C1 | 173.39 (16) |
| C3—C4—C5—C6 | 172.73 (19) | C8—C9—C10—C5 | −60.4 (2) |
| C15—C4—C5—C10 | −178.3 (2) | C14—C5—C10—C1 | 66.0 (2) |
| C3—C4—C5—C10 | 56.6 (2) | C4—C5—C10—C1 | −56.4 (2) |
| C14—C5—C6—C7 | 69.0 (2) | C6—C5—C10—C1 | −174.11 (18) |
| C4—C5—C6—C7 | −168.42 (18) | C14—C5—C10—C9 | −61.1 (2) |
| C10—C5—C6—C7 | −51.8 (2) | C4—C5—C10—C9 | 176.45 (16) |
| C5—C6—C7—C11 | −120.6 (2) | C6—C5—C10—C9 | 58.7 (2) |
| C5—C6—C7—C8 | 53.2 (2) | C6—C7—C11—C12 | 173.9 (2) |
| C12—O1—C8—O3 | 119.6 (2) | C8—C7—C11—C12 | −0.3 (2) |
| C12—O1—C8—C7 | −3.5 (2) | C6—C7—C11—C13 | −3.7 (4) |
| C12—O1—C8—C9 | −121.9 (2) | C8—C7—C11—C13 | −177.9 (2) |
| C11—C7—C8—O3 | −117.3 (2) | C8—O1—C12—O2 | −177.8 (2) |
| C6—C7—C8—O3 | 67.5 (2) | C8—O1—C12—C11 | 3.5 (3) |
| C11—C7—C8—O1 | 2.3 (2) | C7—C11—C12—O2 | 179.5 (3) |
| C6—C7—C8—O1 | −172.85 (17) | C13—C11—C12—O2 | −2.6 (4) |
| C11—C7—C8—C9 | 121.1 (2) | C7—C11—C12—O1 | −2.0 (3) |
| C6—C7—C8—C9 | −54.0 (2) | C13—C11—C12—O1 | 175.8 (2) |
| H··· | ||||
| O3—H3···O4i | 0.90 (4) | 1.87 (4) | 2.750 (3) | 164 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3⋯O4i | 0.90 (4) | 1.87 (4) | 2.750 (3) | 164 (4) |
Symmetry code: (i) .