Literature DB >> 21577798

2-Chloro-1-(3-fluoro-benz-yloxy)-4-nitro-benzene.

Hui-Ling Yu1.   

Abstract

In the title compound, C(13)H(9)ClFNO(3), the benzene rings are oriented at a dihedral angle of 41.23 (5)°. In the crystal structure, inter-molecular C-H⋯O inter-actions link the mol-ecules in a herring-bone arrangement along the b axis and weak π-π contacts between the benzene rings [centroid-centroid distance = 3.881 (1) Å] may further stabilize the structure.

Entities:  

Year:  2009        PMID: 21577798      PMCID: PMC2970168          DOI: 10.1107/S160053680903431X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a dual ErbB-1/ErbB-2 tyrosine kinase inhibitor, see: Petrov et al. (2006 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C13H9ClFNO3 M = 281.66 Monoclinic, a = 8.3290 (17) Å b = 12.640 (3) Å c = 11.875 (2) Å β = 96.94 (3)° V = 1241.0 (4) Å3 Z = 4 Mo Kα radiation μ = 0.32 mm−1 T = 294 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.909, T max = 0.968 2411 measured reflections 2248 independent reflections 1340 reflections with I > 2σ(I) R int = 0.028 3 standard reflections frequency: 120 min intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.149 S = 1.01 2248 reflections 172 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97 and PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680903431X/hk2758sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680903431X/hk2758Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H9ClFNO3F(000) = 576
Mr = 281.66Dx = 1.508 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 8.3290 (17) Åθ = 9–12°
b = 12.640 (3) ŵ = 0.32 mm1
c = 11.875 (2) ÅT = 294 K
β = 96.94 (3)°Block, yellow
V = 1241.0 (4) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1340 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.028
graphiteθmax = 25.3°, θmin = 2.4°
ω/2θ scansh = 0→10
Absorption correction: ψ scan (North et al., 1968)k = 0→15
Tmin = 0.909, Tmax = 0.968l = −14→14
2411 measured reflections3 standard reflections every 120 min
2248 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.07P)2] where P = (Fo2 + 2Fc2)/3
2248 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.81771 (13)0.51262 (7)0.07511 (8)0.0802 (4)
F0.4335 (3)1.00189 (17)−0.29984 (19)0.0996 (8)
O10.6878 (3)0.72025 (15)0.07000 (17)0.0582 (6)
O21.1588 (3)0.5447 (2)0.4720 (2)0.0846 (8)
O31.0836 (4)0.6867 (3)0.5501 (2)0.1058 (10)
N1.0804 (3)0.6268 (3)0.4700 (3)0.0694 (8)
C10.3405 (4)0.8293 (3)−0.2781 (3)0.0670 (10)
H1A0.28010.8325−0.34920.080*
C20.4320 (4)0.9129 (3)−0.2358 (3)0.0629 (9)
C30.5233 (4)0.9117 (2)−0.1320 (3)0.0550 (8)
H3A0.58580.9700−0.10690.066*
C40.5210 (4)0.8224 (2)−0.0653 (3)0.0513 (8)
C50.4296 (4)0.7364 (3)−0.1061 (3)0.0630 (9)
H5A0.42790.6756−0.06210.076*
C60.3407 (4)0.7401 (3)−0.2118 (3)0.0707 (10)
H6A0.28010.6815−0.23860.085*
C70.6137 (4)0.8219 (2)0.0507 (3)0.0587 (9)
H7A0.69590.87670.05640.070*
H7B0.54150.83580.10730.070*
C80.7811 (4)0.7033 (2)0.1694 (3)0.0492 (8)
C90.8086 (4)0.7766 (2)0.2567 (3)0.0564 (8)
H9A0.76090.84310.24880.068*
C100.9064 (4)0.7510 (3)0.3551 (3)0.0597 (9)
H10A0.92500.80020.41350.072*
C110.9755 (4)0.6531 (2)0.3662 (3)0.0531 (8)
C120.9495 (4)0.5787 (3)0.2808 (3)0.0575 (8)
H12A0.99700.51220.28960.069*
C130.8532 (4)0.6039 (2)0.1836 (3)0.0530 (8)
U11U22U33U12U13U23
Cl0.1074 (8)0.0574 (6)0.0736 (7)0.0078 (5)0.0026 (5)−0.0116 (4)
F0.135 (2)0.0791 (15)0.0789 (15)0.0098 (14)−0.0083 (14)0.0259 (11)
O10.0683 (14)0.0475 (12)0.0568 (14)0.0075 (11)−0.0005 (11)0.0012 (10)
O20.0635 (17)0.094 (2)0.0931 (19)0.0152 (16)−0.0032 (14)0.0228 (16)
O30.109 (2)0.124 (3)0.0751 (19)0.014 (2)−0.0258 (17)−0.0135 (19)
N0.0542 (18)0.083 (2)0.069 (2)−0.0014 (18)0.0016 (16)0.0110 (18)
C10.061 (2)0.083 (3)0.055 (2)0.011 (2)−0.0022 (17)−0.0035 (19)
C20.067 (2)0.060 (2)0.062 (2)0.0124 (19)0.0055 (18)0.0090 (18)
C30.0521 (19)0.0494 (18)0.063 (2)0.0055 (15)0.0063 (16)−0.0019 (15)
C40.0482 (18)0.0511 (18)0.0552 (19)0.0061 (15)0.0087 (15)0.0009 (15)
C50.067 (2)0.057 (2)0.065 (2)−0.0028 (18)0.0075 (18)0.0064 (17)
C60.061 (2)0.075 (2)0.074 (3)−0.0052 (19)0.001 (2)−0.008 (2)
C70.068 (2)0.0494 (19)0.057 (2)0.0020 (16)0.0005 (17)0.0031 (15)
C80.0461 (18)0.0499 (18)0.0515 (18)−0.0016 (15)0.0054 (15)0.0030 (15)
C90.062 (2)0.0480 (17)0.060 (2)0.0025 (16)0.0068 (17)0.0020 (16)
C100.060 (2)0.063 (2)0.056 (2)−0.0072 (17)0.0062 (17)−0.0032 (16)
C110.0446 (18)0.0566 (19)0.058 (2)−0.0012 (16)0.0055 (15)0.0078 (16)
C120.049 (2)0.057 (2)0.068 (2)0.0068 (16)0.0107 (17)0.0077 (17)
C130.0534 (19)0.0518 (19)0.0548 (19)−0.0026 (16)0.0096 (16)0.0017 (15)
Cl—C131.728 (3)C5—C61.379 (5)
F—C21.359 (4)C5—H5A0.9300
O1—C71.432 (3)C6—H6A0.9300
O1—C81.350 (4)C7—H7A0.9700
N—O21.225 (4)C7—H7B0.9700
N—O31.214 (4)C8—C91.388 (4)
N—C111.460 (4)C8—C131.394 (4)
C1—C21.363 (5)C9—C101.380 (5)
C1—C61.375 (4)C9—H9A0.9300
C1—H1A0.9300C10—C111.366 (4)
C2—C31.367 (4)C10—H10A0.9300
C3—C41.381 (4)C11—C121.380 (4)
C3—H3A0.9300C12—C131.361 (4)
C4—C51.382 (4)C12—H12A0.9300
C4—C71.496 (4)
C8—O1—C7118.3 (2)O1—C7—H7A110.0
O2—N—C11118.2 (3)C4—C7—H7A110.0
O3—N—O2123.5 (3)O1—C7—H7B110.0
O3—N—C11118.3 (3)C4—C7—H7B110.0
C2—C1—C6117.6 (3)H7A—C7—H7B108.4
C2—C1—H1A121.2O1—C8—C9124.9 (3)
C6—C1—H1A121.2O1—C8—C13116.3 (3)
F—C2—C1118.5 (3)C9—C8—C13118.8 (3)
F—C2—C3118.1 (3)C10—C9—C8120.3 (3)
C1—C2—C3123.3 (3)C10—C9—H9A119.9
C2—C3—C4118.7 (3)C8—C9—H9A119.9
C2—C3—H3A120.6C11—C10—C9119.5 (3)
C4—C3—H3A120.6C11—C10—H10A120.3
C3—C4—C5119.2 (3)C9—C10—H10A120.3
C3—C4—C7119.4 (3)C10—C11—C12121.3 (3)
C5—C4—C7121.4 (3)C10—C11—N119.3 (3)
C6—C5—C4120.3 (3)C12—C11—N119.4 (3)
C6—C5—H5A119.8C13—C12—C11119.2 (3)
C4—C5—H5A119.8C13—C12—H12A120.4
C1—C6—C5120.8 (3)C11—C12—H12A120.4
C1—C6—H6A119.6C12—C13—C8120.9 (3)
C5—C6—H6A119.6C12—C13—Cl120.4 (3)
O1—C7—C4108.4 (2)C8—C13—Cl118.6 (2)
C6—C1—C2—F−180.0 (3)C13—C8—C9—C100.3 (5)
C6—C1—C2—C30.3 (5)C8—C9—C10—C11−0.2 (5)
F—C2—C3—C4179.1 (3)C9—C10—C11—C12−0.1 (5)
C1—C2—C3—C4−1.2 (5)C9—C10—C11—N179.3 (3)
C2—C3—C4—C51.3 (5)O3—N—C11—C1011.0 (5)
C2—C3—C4—C7−177.0 (3)O2—N—C11—C10−170.0 (3)
C3—C4—C5—C6−0.5 (5)O3—N—C11—C12−169.6 (3)
C7—C4—C5—C6177.7 (3)O2—N—C11—C129.5 (4)
C2—C1—C6—C50.5 (5)C10—C11—C12—C130.2 (5)
C4—C5—C6—C1−0.4 (5)N—C11—C12—C13−179.2 (3)
C8—O1—C7—C4178.5 (2)C11—C12—C13—C8−0.1 (4)
C3—C4—C7—O1−140.2 (3)C11—C12—C13—Cl−179.9 (2)
C5—C4—C7—O141.6 (4)O1—C8—C13—C12−179.9 (3)
C7—O1—C8—C91.5 (4)C9—C8—C13—C12−0.2 (4)
C7—O1—C8—C13−178.8 (3)O1—C8—C13—Cl−0.1 (4)
O1—C8—C9—C10−180.0 (3)C9—C8—C13—Cl179.6 (2)
D—H···AD—HH···AD···AD—H···A
C7—H7A···O2i0.972.493.423 (4)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7A⋯O2i0.972.493.423 (4)162

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Optimization and SAR for dual ErbB-1/ErbB-2 tyrosine kinase inhibition in the 6-furanylquinazoline series.

Authors:  Kimberly G Petrov; Yue-Mei Zhang; Malcolm Carter; G Stuart Cockerill; Scott Dickerson; Cassandra A Gauthier; Yu Guo; Robert A Mook; David W Rusnak; Ann L Walker; Edgar R Wood; Karen E Lackey
Journal:  Bioorg Med Chem Lett       Date:  2006-06-13       Impact factor: 2.823

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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