| Literature DB >> 21577721 |
Bo Wang1.
Abstract
The title compound, [CuCl(2)(C(6)H(5)N(5))(2)(H(2)O)(2)]·2H(2)O, was synthesized by hydro-thermal reaction of CuCl(2) with 3-(2H-tetra-zol-5-yl)pyridine. The Cu(II) cation, located on an inversion center, is coordinated by two Cl(-) ions, two N atoms from two 5-(3-pyridinio)tetra-zolate zwitterions and two O atoms from two water mol-ecules in a distorted octa-hedral geometry. In the crystal, mol-ecules are linked into a two-dimensional sheet parallel to (001) by N-H⋯N, O-H⋯N, O-H⋯O and O-H⋯Cl hydrogen bonds involving the pyridinium N atom, the Cl atoms and the coordinated and free water mol-ecules. The latter are disordered over two positions in a 0.54:0.46 ratio.Entities:
Year: 2009 PMID: 21577721 PMCID: PMC2970193 DOI: 10.1107/S1600536809033042
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [CuCl2(C6H5N5)2(H2O)2]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1953 reflections | |
| θ = 3.1–27.5° | |
| µ = 1.53 mm−1 | |
| α = 99.54 (3)° | |
| β = 110.22 (3)° | Block, blue |
| γ = 91.73 (3)° | 0.15 × 0.10 × 0.10 mm |
| Rigaku Mercury2 diffractometer | 2103 independent reflections |
| Radiation source: fine-focus sealed tube | 1953 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
| CCD profile fitting scans | |
| Absorption correction: multi-scan ( | |
| 4880 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2103 reflections | (Δ/σ)max < 0.001 |
| 142 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.43 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Cu1 | 0.5000 | 0.5000 | 0.5000 | 0.02259 (18) | |
| N1 | 0.2750 (6) | −0.3207 (4) | 0.0634 (4) | 0.0311 (7) | |
| H1 | 0.3009 | −0.3948 | 0.1211 | 0.037* | |
| N2 | 0.3845 (5) | 0.1765 (3) | 0.2805 (4) | 0.0228 (6) | |
| N3 | 0.3946 (5) | 0.3381 (3) | 0.2979 (3) | 0.0226 (6) | |
| N4 | 0.3283 (5) | 0.3805 (4) | 0.1585 (4) | 0.0259 (7) | |
| N5 | 0.2733 (6) | 0.2488 (4) | 0.0467 (4) | 0.0268 (7) | |
| C1 | 0.3091 (7) | −0.1653 (5) | 0.1350 (5) | 0.0294 (8) | |
| H1A | 0.3598 | −0.1385 | 0.2454 | 0.035* | |
| C2 | 0.2700 (6) | −0.0447 (4) | 0.0473 (4) | 0.0204 (7) | |
| C3 | 0.1941 (6) | −0.0902 (4) | −0.1163 (4) | 0.0253 (8) | |
| H3 | 0.1656 | −0.0105 | −0.1792 | 0.030* | |
| C4 | 0.1608 (7) | −0.2512 (5) | −0.1860 (5) | 0.0299 (8) | |
| H4 | 0.1095 | −0.2821 | −0.2962 | 0.036* | |
| C5 | 0.2037 (7) | −0.3666 (5) | −0.0919 (5) | 0.0325 (9) | |
| H5 | 0.1825 | −0.4770 | −0.1375 | 0.039* | |
| C6 | 0.3097 (6) | 0.1261 (4) | 0.1255 (4) | 0.0203 (7) | |
| O1W | 0.3115 (5) | 0.3482 (4) | 0.6228 (4) | 0.0451 (8) | |
| H11W | 0.3277 | 0.2489 | 0.6316 | 0.068* | |
| H12W | 0.1779 | 0.3657 | 0.5974 | 0.068* | |
| Cl1 | 0.19420 (15) | 0.63743 (11) | 0.40795 (11) | 0.0307 (2) | |
| O2WA | 0.2969 (13) | 0.0279 (8) | 0.5219 (8) | 0.0506 (16) | 0.54 |
| H1WA | 0.3360 | 0.0607 | 0.4513 | 0.076* | 0.54 |
| H2WA | 0.1618 | 0.0387 | 0.5026 | 0.076* | 0.54 |
| O2WB | 0.1538 (17) | 0.0200 (10) | 0.5354 (13) | 0.068 (3) | 0.46 |
| H1WB | 0.2070 | −0.0699 | 0.5168 | 0.102* | 0.46 |
| H2WB | 0.0279 | 0.0002 | 0.5394 | 0.102* | 0.46 |
| Cu1 | 0.0278 (3) | 0.0148 (3) | 0.0195 (3) | 0.0024 (2) | 0.0043 (2) | −0.0033 (2) |
| N1 | 0.044 (2) | 0.0169 (15) | 0.0295 (17) | 0.0012 (13) | 0.0103 (15) | 0.0029 (13) |
| N2 | 0.0311 (16) | 0.0122 (13) | 0.0221 (15) | 0.0027 (11) | 0.0069 (13) | 0.0005 (11) |
| N3 | 0.0298 (16) | 0.0125 (13) | 0.0230 (15) | 0.0038 (11) | 0.0074 (13) | 0.0001 (11) |
| N4 | 0.0378 (18) | 0.0158 (14) | 0.0215 (15) | 0.0019 (12) | 0.0086 (13) | 0.0007 (11) |
| N5 | 0.0393 (18) | 0.0169 (14) | 0.0205 (15) | −0.0004 (13) | 0.0079 (13) | 0.0002 (12) |
| C1 | 0.042 (2) | 0.0195 (18) | 0.0226 (18) | −0.0009 (15) | 0.0086 (16) | 0.0004 (14) |
| C2 | 0.0228 (16) | 0.0159 (16) | 0.0210 (17) | 0.0006 (12) | 0.0082 (14) | −0.0017 (13) |
| C3 | 0.0301 (19) | 0.0221 (18) | 0.0217 (18) | 0.0010 (14) | 0.0078 (15) | 0.0017 (14) |
| C4 | 0.034 (2) | 0.027 (2) | 0.0216 (18) | −0.0013 (16) | 0.0075 (16) | −0.0072 (15) |
| C5 | 0.038 (2) | 0.0192 (19) | 0.035 (2) | −0.0013 (16) | 0.0115 (18) | −0.0071 (16) |
| C6 | 0.0215 (16) | 0.0168 (16) | 0.0204 (17) | −0.0006 (12) | 0.0064 (13) | 0.0005 (13) |
| O1W | 0.0381 (17) | 0.0354 (17) | 0.061 (2) | −0.0007 (13) | 0.0175 (16) | 0.0064 (15) |
| Cl1 | 0.0299 (5) | 0.0288 (5) | 0.0287 (5) | 0.0066 (4) | 0.0074 (4) | −0.0013 (4) |
| O2WA | 0.069 (5) | 0.034 (3) | 0.051 (4) | 0.008 (3) | 0.023 (4) | 0.007 (3) |
| O2WB | 0.079 (7) | 0.028 (4) | 0.109 (8) | −0.001 (4) | 0.051 (6) | 0.009 (4) |
| Cu1—N3i | 1.984 (3) | C2—C3 | 1.380 (5) |
| Cu1—N3 | 1.984 (3) | C2—C6 | 1.455 (5) |
| Cu1—Cl1 | 2.3070 (12) | C3—C4 | 1.362 (5) |
| Cu1—Cl1i | 2.3070 (12) | C3—H3 | 0.9300 |
| Cu1—O1W | 2.390 (3) | C4—C5 | 1.365 (6) |
| Cu1—O1Wi | 2.390 (3) | C4—H4 | 0.9300 |
| N1—C5 | 1.312 (5) | C5—H5 | 0.9300 |
| N1—C1 | 1.325 (5) | O1W—H11W | 0.8509 |
| N1—H1 | 0.8600 | O1W—H12W | 0.8482 |
| N2—C6 | 1.314 (4) | O2WA—H1WA | 0.8502 |
| N2—N3 | 1.326 (4) | O2WA—H2WA | 0.8506 |
| N3—N4 | 1.306 (4) | O2WA—H1WB | 0.9761 |
| N4—N5 | 1.313 (4) | O2WB—H2WA | 0.3777 |
| N5—C6 | 1.327 (5) | O2WB—H1WB | 0.8518 |
| C1—C2 | 1.362 (5) | O2WB—H2WB | 0.8501 |
| C1—H1A | 0.9300 | ||
| N3i—Cu1—N3 | 180.000 (1) | C2—C1—H1A | 119.9 |
| N3i—Cu1—Cl1 | 90.15 (9) | C1—C2—C3 | 117.9 (3) |
| N3—Cu1—Cl1 | 89.85 (9) | C1—C2—C6 | 120.4 (3) |
| N3i—Cu1—Cl1i | 89.85 (9) | C3—C2—C6 | 121.7 (3) |
| N3—Cu1—Cl1i | 90.15 (9) | C4—C3—C2 | 120.3 (4) |
| Cl1—Cu1—Cl1i | 180.000 (1) | C4—C3—H3 | 119.8 |
| N3i—Cu1—O1W | 87.13 (12) | C2—C3—H3 | 119.8 |
| N3—Cu1—O1W | 92.87 (12) | C3—C4—C5 | 119.1 (4) |
| Cl1—Cu1—O1W | 89.21 (9) | C3—C4—H4 | 120.4 |
| Cl1i—Cu1—O1W | 90.79 (9) | C5—C4—H4 | 120.4 |
| N3i—Cu1—O1Wi | 92.87 (12) | N1—C5—C4 | 119.6 (3) |
| N3—Cu1—O1Wi | 87.13 (12) | N1—C5—H5 | 120.2 |
| Cl1—Cu1—O1Wi | 90.79 (9) | C4—C5—H5 | 120.2 |
| Cl1i—Cu1—O1Wi | 89.21 (9) | N2—C6—N5 | 112.5 (3) |
| O1W—Cu1—O1Wi | 180.0 | N2—C6—C2 | 124.4 (3) |
| C5—N1—C1 | 122.9 (3) | N5—C6—C2 | 123.2 (3) |
| C5—N1—H1 | 118.6 | Cu1—O1W—H11W | 124.2 |
| C1—N1—H1 | 118.6 | Cu1—O1W—H12W | 112.4 |
| C6—N2—N3 | 103.8 (3) | H11W—O1W—H12W | 110.7 |
| N4—N3—N2 | 109.9 (3) | H1WA—O2WA—H2WA | 109.9 |
| N4—N3—Cu1 | 122.7 (2) | H1WA—O2WA—H1WB | 131.0 |
| N2—N3—Cu1 | 127.4 (2) | H2WA—O2WA—H1WB | 64.2 |
| N3—N4—N5 | 109.5 (3) | H2WA—O2WB—H1WB | 97.6 |
| N4—N5—C6 | 104.4 (3) | H2WA—O2WB—H2WB | 122.2 |
| N1—C1—C2 | 120.2 (4) | H1WB—O2WB—H2WB | 109.3 |
| N1—C1—H1A | 119.9 |
| H··· | ||||
| N1—H1···N4ii | 0.86 | 1.96 | 2.763 (4) | 155 |
| O1W—H11W···O2WA | 0.85 | 1.91 | 2.663 (7) | 146 |
| O1W—H11W···O2WB | 0.85 | 2.08 | 2.779 (9) | 139 |
| O1W—H12W···Cl1iii | 0.85 | 2.42 | 3.233 (3) | 161 |
| O2WA—H1WA···N2 | 0.85 | 2.07 | 2.906 (8) | 168 |
| O2WB—H1WB···Cl1ii | 0.85 | 2.46 | 3.259 (9) | 156 |
| O2WB—H2WB···O2WBiv | 0.85 | 1.14 | 1.89 (2) | 143 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯N4i | 0.86 | 1.96 | 2.763 (4) | 155 |
| O1 | 0.85 | 1.91 | 2.663 (7) | 146 |
| O1 | 0.85 | 2.08 | 2.779 (9) | 139 |
| O1 | 0.85 | 2.42 | 3.233 (3) | 161 |
| O2 | 0.85 | 2.07 | 2.906 (8) | 168 |
| O2 | 0.85 | 2.46 | 3.259 (9) | 156 |
Symmetry codes: (i) ; (ii) .