Literature DB >> 21577702

catena-Poly[[aqua-(1,10-phenanthroline)cobalt(II)]-μ-4,4'-(propane-1,3-diyldi-oxy)dibenzoato].

Su-Mei Shen1.   

Abstract

In the title compound, [Co(C(17)H(14)O(6))(C(12)H(8)N(2))(H(2)O)](n), the Co(II) atom is coordinated by a monodentate 4,4'-(propane-1,3-diyldi-oxy)dibenzoate (cpp) dianion, a water mol-ecule and a chelating 1,10-phenanthroline (phen) ligand. A symmetry-generated cpp ligand completes the CoN(2)O(3) trigonal-bipyramidal geometry for the metal ion, with the N atoms occupying both equatorial and axial sites. The bridging cpp ligands form chains propagating in [110] and O-H⋯O hydrogen bonds consolidate the packing.

Entities:  

Year:  2009        PMID: 21577702      PMCID: PMC2970340          DOI: 10.1107/S1600536809035089

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Chen & Liu (2002 ▶). For background to metal-organic frameworks, see: Kitagawa et al. (2004 ▶); Liu et al. (2009 ▶); Schokecht & Kempe (2004 ▶).

Experimental

Crystal data

[Co(C17H14O6)(C12H8N2)(H2O)] M = 571.43 Triclinic, a = 8.5967 (17) Å b = 11.432 (2) Å c = 14.423 (3) Å α = 68.433 (3)° β = 87.673 (4)° γ = 74.635 (4)° V = 1268.5 (4) Å3 Z = 2 Mo Kα radiation μ = 0.73 mm−1 T = 298 K 0.23 × 0.14 × 0.11 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.850, T max = 0.924 6503 measured reflections 4499 independent reflections 2242 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.063 S = 0.91 4499 reflections 358 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809035089/hb5085sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809035089/hb5085Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C17H14O6)(C12H8N2)(H2O)]Z = 2
Mr = 571.43F(000) = 590
Triclinic, P1Dx = 1.496 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.5967 (17) ÅCell parameters from 4499 reflections
b = 11.432 (2) Åθ = 1.5–25.2°
c = 14.423 (3) ŵ = 0.73 mm1
α = 68.433 (3)°T = 298 K
β = 87.673 (4)°Block, pink
γ = 74.635 (4)°0.23 × 0.14 × 0.11 mm
V = 1268.5 (4) Å3
Bruker APEXII area-detector diffractometer4499 independent reflections
Radiation source: fine-focus sealed tube2242 reflections with I > 2σ(I)
graphiteRint = 0.032
φ and ω scansθmax = 25.2°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→8
Tmin = 0.850, Tmax = 0.924k = −11→13
6503 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.063H atoms treated by a mixture of independent and constrained refinement
S = 0.91w = 1/[σ2(Fo2) + (0.01P)2 + 0.001P] where P = (Fo2 + 2Fc2)/3
4499 reflections(Δ/σ)max < 0.001
358 parametersΔρmax = 0.19 e Å3
3 restraintsΔρmin = −0.21 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.63053 (6)−0.14519 (4)0.37254 (3)0.04796 (15)
O10.6918 (3)0.01199 (17)0.26875 (13)0.0552 (6)
O20.5285 (3)0.08365 (17)0.36879 (14)0.0568 (6)
O61.4634 (3)0.84914 (19)0.28126 (14)0.0557 (6)
O51.2435 (3)0.91935 (18)0.35373 (14)0.0599 (6)
O30.6256 (3)0.62108 (18)0.06262 (15)0.0663 (7)
O40.9367 (3)0.79789 (19)0.01759 (15)0.0645 (7)
O1W0.4880 (3)−0.19495 (18)0.49172 (15)0.0547 (6)
N30.8001 (3)−0.2965 (2)0.34395 (17)0.0459 (7)
N40.8312 (3)−0.1855 (2)0.47342 (16)0.0479 (7)
C50.6272 (4)0.4931 (3)0.1143 (2)0.0478 (9)
C151.2806 (4)0.8073 (2)0.14796 (19)0.0446 (8)
H151.39260.78000.14810.053*
C20.6156 (4)0.2400 (3)0.23088 (19)0.0372 (8)
C171.3121 (5)0.8825 (3)0.2871 (2)0.0442 (9)
C141.2101 (4)0.8686 (2)0.21218 (19)0.0388 (8)
C111.0202 (5)0.8281 (3)0.0810 (2)0.0466 (9)
C220.9490 (4)−0.3320 (3)0.3897 (2)0.0431 (8)
C10.6105 (4)0.1044 (3)0.2937 (2)0.0449 (9)
C161.1861 (5)0.7864 (3)0.0841 (2)0.0513 (9)
H161.23490.74350.04240.062*
C131.0445 (4)0.9135 (2)0.2059 (2)0.0428 (8)
H130.99590.95740.24690.051*
C230.9660 (4)−0.2726 (3)0.4596 (2)0.0427 (8)
C201.0562 (5)−0.4759 (3)0.3037 (2)0.0574 (10)
H201.1410−0.53480.28880.069*
C120.9468 (4)0.8959 (2)0.1406 (2)0.0462 (8)
H120.83500.92870.13700.055*
C70.7238 (4)0.2625 (3)0.1578 (2)0.0491 (9)
H70.79390.19180.14730.059*
C180.7807 (4)−0.3527 (3)0.2806 (2)0.0516 (9)
H180.6787−0.33140.24980.062*
C40.5183 (4)0.4717 (3)0.1876 (2)0.0517 (9)
H40.44800.54220.19830.062*
C60.7314 (4)0.3883 (3)0.0993 (2)0.0536 (10)
H60.80610.40130.05060.064*
C30.5132 (4)0.3464 (3)0.2450 (2)0.0473 (9)
H30.43930.33340.29410.057*
C211.0827 (4)−0.4225 (3)0.3726 (2)0.0454 (8)
C290.8459 (4)−0.1330 (3)0.5391 (2)0.0566 (10)
H290.7556−0.07370.54890.068*
C261.1150 (4)−0.3060 (3)0.5110 (2)0.0494 (9)
C241.2331 (4)−0.4527 (3)0.4262 (2)0.0606 (10)
H241.3225−0.51200.41540.073*
C90.7016 (4)0.7961 (3)−0.0633 (2)0.0729 (12)
H9A0.58690.8383−0.07870.088*
H9B0.75510.8191−0.12550.088*
C190.9069 (5)−0.4420 (3)0.2586 (2)0.0596 (10)
H190.8888−0.47810.21320.072*
C80.7272 (4)0.6493 (3)−0.0194 (2)0.0680 (11)
H8A0.69890.6191−0.06950.082*
H8B0.83960.60560.00350.082*
C271.1243 (4)−0.2470 (3)0.5802 (2)0.0615 (10)
H271.2213−0.26610.61590.074*
C280.9895 (5)−0.1616 (3)0.5944 (2)0.0635 (10)
H280.9935−0.12290.64050.076*
C251.2484 (4)−0.3972 (3)0.4922 (2)0.0581 (9)
H251.3481−0.41890.52590.070*
C100.7656 (5)0.8476 (3)0.0062 (2)0.0634 (10)
H10A0.73590.9423−0.02170.076*
H10B0.71960.81950.07060.076*
H1WA0.399 (3)−0.145 (3)0.453 (2)0.095*
H1WB0.482 (4)−0.163 (3)0.5397 (16)0.095*
U11U22U33U12U13U23
Co10.0490 (4)0.0497 (3)0.0462 (3)−0.0154 (2)−0.0012 (2)−0.0169 (2)
O10.0598 (18)0.0395 (13)0.0671 (15)−0.0094 (11)0.0061 (12)−0.0235 (11)
O20.072 (2)0.0588 (14)0.0454 (14)−0.0295 (12)0.0080 (12)−0.0181 (11)
O60.0438 (18)0.0788 (16)0.0523 (14)−0.0163 (13)−0.0046 (13)−0.0324 (12)
O50.0539 (18)0.0800 (16)0.0604 (15)−0.0118 (12)−0.0031 (12)−0.0462 (13)
O30.085 (2)0.0444 (14)0.0696 (16)−0.0252 (13)−0.0050 (14)−0.0151 (12)
O40.079 (2)0.0670 (15)0.0612 (15)−0.0276 (15)−0.0163 (14)−0.0321 (12)
O1W0.064 (2)0.0617 (15)0.0437 (14)−0.0218 (12)0.0013 (11)−0.0222 (12)
N30.053 (2)0.0458 (16)0.0438 (16)−0.0165 (14)−0.0043 (15)−0.0190 (13)
N40.057 (2)0.0510 (16)0.0426 (16)−0.0185 (15)−0.0054 (14)−0.0218 (13)
C50.062 (3)0.036 (2)0.047 (2)−0.0167 (19)−0.0113 (19)−0.0136 (17)
C150.048 (3)0.0424 (18)0.0453 (19)−0.0145 (16)0.0018 (18)−0.0170 (16)
C20.044 (2)0.0402 (19)0.0331 (18)−0.0136 (17)−0.0008 (16)−0.0176 (15)
C170.053 (3)0.0387 (19)0.043 (2)−0.0141 (18)0.000 (2)−0.0160 (16)
C140.051 (3)0.0331 (17)0.0341 (18)−0.0136 (17)0.0003 (17)−0.0125 (14)
C110.063 (3)0.0393 (19)0.042 (2)−0.0215 (19)−0.0062 (19)−0.0131 (16)
C220.049 (3)0.0407 (19)0.040 (2)−0.0205 (18)0.0011 (18)−0.0100 (16)
C10.048 (3)0.045 (2)0.048 (2)−0.0173 (18)−0.0128 (18)−0.0192 (18)
C160.061 (3)0.049 (2)0.052 (2)−0.012 (2)0.001 (2)−0.0296 (17)
C130.049 (3)0.0384 (18)0.045 (2)−0.0107 (17)0.0005 (18)−0.0202 (15)
C230.045 (3)0.046 (2)0.038 (2)−0.0179 (18)−0.0025 (18)−0.0128 (16)
C200.060 (3)0.052 (2)0.058 (2)−0.008 (2)0.001 (2)−0.0235 (18)
C120.047 (3)0.0418 (19)0.049 (2)−0.0120 (16)−0.0071 (18)−0.0146 (16)
C70.067 (3)0.043 (2)0.047 (2)−0.0169 (18)0.0029 (19)−0.0259 (17)
C180.063 (3)0.051 (2)0.046 (2)−0.0232 (19)−0.0024 (18)−0.0167 (17)
C40.049 (3)0.040 (2)0.067 (2)−0.0037 (17)−0.0044 (19)−0.0248 (18)
C60.080 (3)0.049 (2)0.043 (2)−0.030 (2)0.0109 (19)−0.0209 (17)
C30.047 (3)0.048 (2)0.047 (2)−0.0140 (18)−0.0013 (17)−0.0169 (17)
C210.045 (3)0.044 (2)0.048 (2)−0.0119 (18)0.0055 (19)−0.0169 (16)
C290.062 (3)0.056 (2)0.059 (2)−0.0123 (19)−0.003 (2)−0.0311 (18)
C260.044 (3)0.048 (2)0.056 (2)−0.0140 (18)−0.0012 (19)−0.0179 (17)
C240.048 (3)0.051 (2)0.078 (3)−0.0065 (18)0.001 (2)−0.0237 (19)
C90.110 (4)0.060 (2)0.051 (2)−0.047 (2)−0.029 (2)−0.0032 (18)
C190.071 (3)0.060 (2)0.056 (2)−0.016 (2)−0.001 (2)−0.0324 (19)
C80.107 (4)0.056 (2)0.051 (2)−0.044 (2)−0.010 (2)−0.0138 (18)
C270.062 (3)0.071 (2)0.059 (2)−0.025 (2)−0.015 (2)−0.024 (2)
C280.061 (3)0.071 (3)0.070 (3)−0.016 (2)−0.015 (2)−0.040 (2)
C250.042 (3)0.062 (2)0.071 (2)−0.0132 (19)−0.0098 (19)−0.024 (2)
C100.082 (4)0.050 (2)0.055 (2)−0.026 (2)−0.023 (2)−0.0072 (17)
Co1—O6i2.017 (2)C13—C121.387 (4)
Co1—O12.0511 (17)C13—H130.9300
Co1—O1W2.063 (2)C23—C261.395 (4)
Co1—N32.104 (2)C20—C191.357 (4)
Co1—N42.143 (2)C20—C211.396 (4)
O1—C11.265 (3)C20—H200.9300
O2—C11.251 (3)C12—H120.9300
O6—C171.263 (3)C7—C61.392 (3)
O6—Co1ii2.017 (2)C7—H70.9300
O5—C171.253 (3)C18—C191.394 (4)
O3—C51.373 (3)C18—H180.9300
O3—C81.432 (3)C4—C31.377 (3)
O4—C111.374 (3)C4—H40.9300
O4—C101.421 (4)C6—H60.9300
O1W—H1WA0.885 (17)C3—H30.9300
O1W—H1WB0.885 (15)C21—C241.427 (4)
N3—C181.332 (3)C29—C281.393 (4)
N3—C221.354 (4)C29—H290.9300
N4—C291.319 (3)C26—C271.409 (3)
N4—C231.374 (3)C26—C251.423 (4)
C5—C61.375 (4)C24—C251.352 (3)
C5—C41.381 (3)C24—H240.9300
C15—C161.376 (4)C9—C81.517 (3)
C15—C141.387 (3)C9—C101.518 (3)
C15—H150.9300C9—H9A0.9700
C2—C71.374 (3)C9—H9B0.9700
C2—C31.376 (3)C19—H190.9300
C2—C11.493 (3)C8—H8A0.9700
C17—C141.496 (4)C8—H8B0.9700
C14—C131.374 (4)C27—C281.366 (4)
C11—C161.375 (4)C27—H270.9300
C11—C121.388 (3)C28—H280.9300
C22—C211.409 (4)C25—H250.9300
C22—C231.439 (3)C10—H10A0.9700
C16—H160.9300C10—H10B0.9700
O6i—Co1—O195.13 (8)C13—C12—H12120.9
O6i—Co1—O1W90.40 (9)C11—C12—H12120.9
O1—Co1—O1W142.18 (7)C2—C7—C6121.8 (3)
O6i—Co1—N390.17 (10)C2—C7—H7119.1
O1—Co1—N399.18 (8)C6—C7—H7119.1
O1W—Co1—N3118.22 (8)N3—C18—C19122.8 (3)
O6i—Co1—N4166.69 (9)N3—C18—H18118.6
O1—Co1—N492.61 (8)C19—C18—H18118.6
O1W—Co1—N490.10 (9)C3—C4—C5120.3 (3)
N3—Co1—N477.90 (10)C3—C4—H4119.8
C1—O1—Co1101.40 (18)C5—C4—H4119.8
C17—O6—Co1ii125.76 (19)C5—C6—C7119.2 (3)
C5—O3—C8118.2 (2)C5—C6—H6120.4
C11—O4—C10118.3 (2)C7—C6—H6120.4
Co1—O1W—H1WA91 (2)C2—C3—C4121.2 (3)
Co1—O1W—H1WB122.6 (19)C2—C3—H3119.4
H1WA—O1W—H1WB103 (2)C4—C3—H3119.4
C18—N3—C22117.3 (3)C20—C21—C22116.5 (3)
C18—N3—Co1127.3 (2)C20—C21—C24125.1 (3)
C22—N3—Co1115.16 (19)C22—C21—C24118.3 (3)
C29—N4—C23117.4 (3)N4—C29—C28123.5 (3)
C29—N4—Co1129.9 (2)N4—C29—H29118.3
C23—N4—Co1112.55 (19)C28—C29—H29118.3
O3—C5—C6124.4 (3)C23—C26—C27117.3 (3)
O3—C5—C4116.0 (3)C23—C26—C25119.3 (3)
C6—C5—C4119.5 (3)C27—C26—C25123.4 (4)
C16—C15—C14120.5 (3)C25—C24—C21121.4 (3)
C16—C15—H15119.8C25—C24—H24119.3
C14—C15—H15119.8C21—C24—H24119.3
C7—C2—C3118.0 (3)C8—C9—C10113.0 (2)
C7—C2—C1121.0 (3)C8—C9—H9A109.0
C3—C2—C1121.0 (3)C10—C9—H9A109.0
O5—C17—O6124.6 (3)C8—C9—H9B109.0
O5—C17—C14118.5 (3)C10—C9—H9B109.0
O6—C17—C14116.8 (3)H9A—C9—H9B107.8
C13—C14—C15117.9 (3)C20—C19—C18119.7 (3)
C13—C14—C17121.5 (3)C20—C19—H19120.2
C15—C14—C17120.6 (3)C18—C19—H19120.2
O4—C11—C16116.4 (3)O3—C8—C9107.4 (3)
O4—C11—C12123.8 (3)O3—C8—H8A110.2
C16—C11—C12119.8 (3)C9—C8—H8A110.2
N3—C22—C21123.7 (3)O3—C8—H8B110.2
N3—C22—C23116.3 (3)C9—C8—H8B110.2
C21—C22—C23120.1 (3)H8A—C8—H8B108.5
O2—C1—O1121.5 (3)C28—C27—C26119.4 (3)
O2—C1—C2120.5 (3)C28—C27—H27120.3
O1—C1—C2118.0 (3)C26—C27—H27120.3
C11—C16—C15120.9 (3)C27—C28—C29119.3 (3)
C11—C16—H16119.6C27—C28—H28120.3
C15—C16—H16119.6C29—C28—H28120.3
C14—C13—C12122.6 (3)C24—C25—C26121.3 (3)
C14—C13—H13118.7C24—C25—H25119.4
C12—C13—H13118.7C26—C25—H25119.4
N4—C23—C26123.0 (3)O4—C10—C9108.3 (3)
N4—C23—C22117.4 (3)O4—C10—H10A110.0
C26—C23—C22119.6 (3)C9—C10—H10A110.0
C19—C20—C21120.1 (3)O4—C10—H10B110.0
C19—C20—H20120.0C9—C10—H10B110.0
C21—C20—H20120.0H10A—C10—H10B108.4
C13—C12—C11118.2 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1WB···O2iii0.89 (2)1.85 (2)2.729 (3)175 (3)
O1W—H1WA···O5i0.89 (2)1.80 (2)2.657 (3)161 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WB⋯O2i0.885 (15)1.847 (16)2.729 (3)175 (3)
O1W—H1WA⋯O5ii0.885 (17)1.804 (17)2.657 (3)161 (3)

Symmetry codes: (i) ; (ii) .

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