Literature DB >> 21577701

Diaqua-bis[2-(4-bromo-phen-yl)acetato]bis-(N,N-dimethyl-pyridin-4-amine)copper(II).

Yong-Ming Cui1, Xi-Bin Dai, Ru-Hua Zha, Qing-Fu Zeng.   

Abstract

In the title compound, [Cu(C(8)H(6)BrO(2))(2)(C(7)H(10)N(2))(2)(H(2)O)(2)], the Cu(II) atom (site symmetry ) adopts a Jahn-Teller-distorted trans-CuN(2)O(4) octa-hedral coordination, with the aqua O atoms in axially extended sites. An intra-molecular O-H⋯O hydrogen bond helps to establish the conformation and an inter-molecular O-H⋯O hydrogen bond is seen in the crystal packing.

Entities:  

Year:  2009        PMID: 21577701      PMCID: PMC2970236          DOI: 10.1107/S1600536809034461

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to coordination networks, see: Liu & Zhu (2004 ▶); Yang et al. (2004 ▶); You et al. (2004 ▶). For reference structural data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

[Cu(C8H6BrO2)2(C7H10N2)2(H2O)2] M = 771.99 Monoclinic, a = 10.4792 (10) Å b = 6.1059 (6) Å c = 25.450 (2) Å β = 100.958 (4)° V = 1598.7 (3) Å3 Z = 2 Mo Kα radiation μ = 3.23 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.499, T max = 0.564 8029 measured reflections 2815 independent reflections 2189 reflections with I > 2σ(I) R int = 0.026 200 standard reflections every 3 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.099 S = 1.01 2815 reflections 198 parameters H-atom parameters constrained Δρmax = 0.60 e Å−3 Δρmin = −0.71 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809034461/hb5065sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034461/hb5065Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C8H6BrO2)2(C7H10N2)2(H2O)2]F(000) = 782
Mr = 771.99Dx = 1.604 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 10.4792 (10) Åθ = 9–12°
b = 6.1059 (6) ŵ = 3.23 mm1
c = 25.450 (2) ÅT = 293 K
β = 100.958 (4)°Block, green
V = 1598.7 (3) Å30.25 × 0.20 × 0.20 mm
Z = 2
Enraf–Nonius CAD-4 diffractometer2189 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
graphiteθmax = 25.0°, θmin = 1.6°
ω/2θ scansh = −10→12
Absorption correction: ψ scan (North et al., 1968)k = −7→7
Tmin = 0.499, Tmax = 0.564l = −30→28
8029 measured reflections200 standard reflections every 3 reflections
2815 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0539P)2 + 0.7463P] where P = (Fo2 + 2Fc2)/3
2815 reflections(Δ/σ)max < 0.001
198 parametersΔρmax = 0.60 e Å3
0 restraintsΔρmin = −0.71 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.10163 (4)0.98365 (8)0.229572 (18)0.0870 (2)
C10.4910 (3)0.8264 (4)0.17361 (10)0.0366 (6)
C20.3209 (3)0.7210 (6)0.21980 (12)0.0567 (9)
H20.28540.61950.24020.068*
C30.4355 (3)0.6766 (5)0.20345 (11)0.0479 (8)
H30.47670.54330.21260.058*
C40.3099 (3)1.0674 (6)0.17612 (13)0.0525 (8)
H40.26691.19910.16680.063*
C50.4259 (3)1.0225 (5)0.15993 (13)0.0462 (8)
H50.46081.12500.13960.055*
C60.2591 (3)0.9156 (6)0.20593 (12)0.0492 (8)
C70.6186 (3)0.7783 (5)0.15678 (10)0.0411 (7)
H7A0.68070.72520.18730.049*
H7B0.65290.91210.14430.049*
C100.6013 (3)0.6071 (5)0.11224 (10)0.0354 (6)
C120.1011 (3)0.4106 (5)0.06736 (10)0.0354 (6)
C130.1512 (3)0.2454 (5)0.03830 (11)0.0410 (7)
H130.10830.11170.03240.049*
C140.2815 (3)0.6273 (4)0.05081 (11)0.0373 (6)
H140.32540.76050.05480.045*
C150.2618 (3)0.2798 (5)0.01872 (11)0.0392 (7)
H150.29180.16580.00010.047*
C160.1726 (3)0.6080 (5)0.07202 (11)0.0393 (7)
H160.14470.72640.08990.047*
C17−0.0511 (4)0.5523 (6)0.12039 (17)0.0694 (11)
H17A0.02060.61430.14500.104*
H17B−0.11260.49180.13990.104*
H17C−0.09240.66440.09660.104*
C19−0.0777 (3)0.1795 (6)0.08259 (15)0.0640 (10)
H19A−0.11670.16220.04550.096*
H19B−0.14450.18410.10370.096*
H19C−0.02070.05830.09390.096*
Cu10.50000.50000.00000.03234 (15)
N1−0.0042 (2)0.3814 (4)0.08968 (10)0.0462 (6)
N20.3302 (2)0.4658 (3)0.02439 (9)0.0331 (5)
O10.6222 (2)0.4143 (4)0.12444 (8)0.0570 (6)
O20.56545 (17)0.6809 (3)0.06509 (7)0.0372 (4)
O30.58520 (19)0.1416 (3)0.03998 (7)0.0469 (5)
H3B0.55910.00500.04630.056*
H3A0.60110.21050.07270.056*
U11U22U33U12U13U23
Br10.0564 (3)0.1343 (5)0.0770 (3)−0.0039 (2)0.0294 (2)−0.0350 (3)
C10.0497 (17)0.0354 (15)0.0256 (13)−0.0051 (13)0.0092 (12)−0.0073 (11)
C20.069 (2)0.065 (2)0.0416 (17)−0.0128 (19)0.0260 (16)0.0034 (15)
C30.065 (2)0.0413 (17)0.0386 (15)0.0014 (16)0.0123 (15)0.0054 (13)
C40.061 (2)0.0482 (18)0.0505 (18)0.0102 (17)0.0149 (16)−0.0055 (15)
C50.060 (2)0.0394 (18)0.0421 (16)−0.0025 (15)0.0167 (15)−0.0010 (13)
C60.0488 (18)0.064 (2)0.0388 (16)−0.0027 (17)0.0171 (14)−0.0152 (15)
C70.0470 (17)0.0440 (17)0.0323 (14)−0.0046 (14)0.0080 (12)−0.0083 (12)
C100.0345 (15)0.0392 (17)0.0358 (15)−0.0073 (13)0.0155 (12)−0.0071 (12)
C120.0330 (14)0.0396 (15)0.0348 (14)−0.0011 (13)0.0093 (12)0.0013 (12)
C130.0413 (16)0.0349 (15)0.0505 (16)−0.0085 (13)0.0177 (13)−0.0096 (13)
C140.0407 (15)0.0298 (15)0.0447 (16)−0.0029 (12)0.0164 (13)−0.0063 (12)
C150.0437 (16)0.0334 (15)0.0452 (16)−0.0045 (13)0.0199 (13)−0.0103 (12)
C160.0405 (16)0.0337 (16)0.0477 (16)0.0018 (13)0.0188 (13)−0.0063 (13)
C170.062 (2)0.073 (2)0.087 (3)−0.0086 (19)0.048 (2)−0.017 (2)
C190.054 (2)0.067 (2)0.079 (2)−0.0204 (18)0.0334 (18)−0.0083 (19)
Cu10.0321 (3)0.0372 (3)0.0304 (3)−0.0056 (2)0.01259 (19)−0.00735 (18)
N10.0408 (14)0.0468 (15)0.0572 (15)−0.0077 (12)0.0249 (12)−0.0071 (12)
N20.0355 (12)0.0318 (13)0.0351 (12)−0.0014 (10)0.0143 (10)−0.0048 (9)
O10.0861 (18)0.0371 (12)0.0473 (12)−0.0003 (12)0.0116 (11)−0.0025 (10)
O20.0436 (11)0.0381 (11)0.0317 (10)−0.0060 (9)0.0114 (8)−0.0075 (8)
O30.0602 (13)0.0386 (11)0.0438 (11)−0.0036 (10)0.0146 (9)−0.0017 (9)
Br1—C61.906 (3)C14—N21.347 (3)
C1—C31.386 (4)C14—C161.357 (4)
C1—C51.389 (4)C14—H140.9300
C1—C71.508 (4)C15—N21.336 (3)
C2—C61.367 (5)C15—H150.9300
C2—C31.371 (4)C16—H160.9300
C2—H20.9300C17—N11.445 (4)
C3—H30.9300C17—H17A0.9600
C4—C61.368 (5)C17—H17B0.9600
C4—C51.384 (5)C17—H17C0.9600
C4—H40.9300C19—N11.447 (4)
C5—H50.9300C19—H19A0.9600
C7—C101.527 (4)C19—H19B0.9600
C7—H7A0.9700C19—H19C0.9600
C7—H7B0.9700Cu1—O2i2.0006 (17)
C10—O11.226 (4)Cu1—O22.0006 (17)
C10—O21.270 (3)Cu1—N22.004 (2)
C12—N11.345 (3)Cu1—N2i2.004 (2)
C12—C131.410 (4)Cu1—O32.5052 (19)
C12—C161.412 (4)Cu1—O3i2.5052 (19)
C13—C151.362 (4)O3—H3B0.9018
C13—H130.9300O3—H3A0.9200
C3—C1—C5117.9 (3)C14—C16—C12120.9 (3)
C3—C1—C7121.0 (3)C14—C16—H16119.6
C5—C1—C7121.1 (3)C12—C16—H16119.6
C6—C2—C3119.5 (3)N1—C17—H17A109.5
C6—C2—H2120.2N1—C17—H17B109.5
C3—C2—H2120.2H17A—C17—H17B109.5
C2—C3—C1121.3 (3)N1—C17—H17C109.5
C2—C3—H3119.4H17A—C17—H17C109.5
C1—C3—H3119.4H17B—C17—H17C109.5
C6—C4—C5119.2 (3)N1—C19—H19A109.5
C6—C4—H4120.4N1—C19—H19B109.5
C5—C4—H4120.4H19A—C19—H19B109.5
C4—C5—C1120.9 (3)N1—C19—H19C109.5
C4—C5—H5119.5H19A—C19—H19C109.5
C1—C5—H5119.5H19B—C19—H19C109.5
C2—C6—C4121.1 (3)O2i—Cu1—O2180.00 (6)
C2—C6—Br1120.3 (3)O2i—Cu1—N290.81 (8)
C4—C6—Br1118.6 (3)O2—Cu1—N289.19 (8)
C1—C7—C10111.0 (2)O2i—Cu1—N2i89.19 (8)
C1—C7—H7A109.4O2—Cu1—N2i90.81 (8)
C10—C7—H7A109.4N2—Cu1—N2i180.00 (11)
C1—C7—H7B109.4O2—Cu1—O396.11 (7)
C10—C7—H7B109.4O2—Cu1—O3i83.89 (7)
H7A—C7—H7B108.0O3—Cu1—N292.98 (7)
O1—C10—O2125.9 (2)O3—Cu1—O2i83.89 (7)
O1—C10—C7118.6 (2)O3—Cu1—O3i180.00 (7)
O2—C10—C7115.5 (2)O3—Cu1—N2i87.02 (7)
N1—C12—C13122.9 (3)N2—Cu1—O3i87.02 (7)
N1—C12—C16122.8 (3)O2i—Cu1—O3i96.11 (7)
C13—C12—C16114.2 (2)O3i—Cu1—N2i92.98 (7)
C15—C13—C12120.6 (3)C12—N1—C17121.5 (3)
C15—C13—H13119.7C12—N1—C19121.4 (3)
C12—C13—H13119.7C17—N1—C19117.1 (3)
N2—C14—C16124.2 (3)C15—N2—C14115.4 (2)
N2—C14—H14117.9C15—N2—Cu1123.04 (18)
C16—C14—H14117.9C14—N2—Cu1121.40 (18)
N2—C15—C13124.6 (2)C10—O2—Cu1125.44 (18)
N2—C15—H15117.7H3B—O3—H3A105.6
C13—C15—H15117.7
D—H···AD—HH···AD···AD—H···A
O3—H3B···O2ii0.902.032.901 (3)161
O3—H3A···O10.921.792.688 (3)163
Table 1

Selected bond lengths (Å)

Cu1—O22.0006 (17)
Cu1—N22.004 (2)
Cu1—O32.5052 (19)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3B⋯O2i0.902.032.901 (3)161
O3—H3A⋯O10.921.792.688 (3)163

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Bis(acetato-κO,O')bis-[4-(dimethyl-amino)-pyridine-κN]copper(II).

Authors:  Meriem Benslimane; Hocine Merazig; Jean-Claude Daran
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.