| Literature DB >> 21577699 |
Min Guo1.
Abstract
In the centrosymmetric title complex, [Cu(C(6)H(5)N(6))(2)], the Cu(II) ion is coordinated by four N atoms from two symmetry-related bidentate 5-(2-amino-3-pyrid-yl)tetra-zolate ligands in a slightly distorted square-planar environment. There are weak intra-molecular N-H⋯N hydrogen bonds between the two ligands. In the crystal structure, there are significant π-π stacking inter-actions between symmetry-related tetra-zole and pyridine rings, with a centroid-centroid distance of 3.6025 (18)°.Entities:
Year: 2009 PMID: 21577699 PMCID: PMC2970265 DOI: 10.1107/S1600536809034369
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C6H5N6)2] | |
| Monoclinic, | Melting point: 723 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 2942 reflections | |
| θ = 3.0–27.5° | |
| µ = 1.59 mm−1 | |
| β = 100.692 (2)° | |
| Rectangle, green | |
| 0.15 × 0.13 × 0.09 mm |
| Rigaku Mercury2 diffractometer | 1363 independent reflections |
| Radiation source: fine-focus sealed tube | 1228 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 26.0°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 3743 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1363 reflections | (Δ/σ)max < 0.001 |
| 115 parameters | Δρmax = 0.69 e Å−3 |
| 0 restraints | Δρmin = −0.73 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.5000 | 0.5000 | 0.5000 | 0.0265 (2) | |
| N6 | 1.0060 (4) | 0.1967 (3) | 0.61317 (18) | 0.0302 (6) | |
| C6 | 0.7920 (5) | 0.3986 (4) | 0.3685 (2) | 0.0260 (6) | |
| C5 | 0.9283 (4) | 0.3088 (4) | 0.4476 (2) | 0.0263 (6) | |
| N4 | 0.6177 (4) | 0.4748 (3) | 0.37835 (19) | 0.0294 (6) | |
| C4 | 0.8741 (5) | 0.2899 (4) | 0.5446 (2) | 0.0258 (6) | |
| N3 | 0.8245 (4) | 0.4167 (4) | 0.27476 (19) | 0.0345 (6) | |
| C3 | 1.1079 (5) | 0.2369 (4) | 0.4307 (2) | 0.0322 (7) | |
| H3A | 1.1439 | 0.2497 | 0.3680 | 0.039* | |
| N2 | 0.5399 (4) | 0.5422 (4) | 0.2875 (2) | 0.0365 (6) | |
| C2 | 1.2364 (5) | 0.1461 (4) | 0.5041 (3) | 0.0364 (7) | |
| H2A | 1.3576 | 0.0997 | 0.4914 | 0.044* | |
| C1 | 1.1816 (5) | 0.1263 (4) | 0.5947 (2) | 0.0349 (7) | |
| H1A | 1.2646 | 0.0642 | 0.6446 | 0.042* | |
| N1 | 0.6643 (5) | 0.5072 (4) | 0.2266 (2) | 0.0385 (7) | |
| N5 | 0.7116 (4) | 0.3534 (3) | 0.56979 (17) | 0.0291 (6) | |
| H5A | 0.7585 | 0.4076 | 0.6279 | 0.035* | |
| H5B | 0.6431 | 0.2629 | 0.5866 | 0.035* |
| Cu1 | 0.0241 (3) | 0.0352 (3) | 0.0227 (3) | 0.00433 (19) | 0.0104 (2) | 0.00138 (19) |
| N6 | 0.0281 (14) | 0.0330 (14) | 0.0300 (13) | 0.0006 (10) | 0.0068 (11) | 0.0029 (10) |
| C6 | 0.0267 (15) | 0.0296 (14) | 0.0243 (13) | −0.0035 (11) | 0.0112 (11) | −0.0035 (11) |
| C5 | 0.0250 (15) | 0.0270 (14) | 0.0292 (15) | −0.0012 (11) | 0.0108 (12) | −0.0019 (11) |
| N4 | 0.0280 (14) | 0.0395 (14) | 0.0223 (12) | 0.0041 (11) | 0.0087 (10) | 0.0012 (10) |
| C4 | 0.0239 (15) | 0.0258 (14) | 0.0286 (14) | −0.0029 (11) | 0.0076 (12) | 0.0000 (11) |
| N3 | 0.0342 (15) | 0.0477 (16) | 0.0248 (12) | 0.0030 (12) | 0.0137 (11) | −0.0019 (11) |
| C3 | 0.0325 (17) | 0.0347 (16) | 0.0328 (16) | 0.0011 (13) | 0.0151 (13) | −0.0031 (13) |
| N2 | 0.0353 (16) | 0.0513 (16) | 0.0245 (13) | 0.0073 (13) | 0.0100 (11) | 0.0046 (12) |
| C2 | 0.0280 (16) | 0.0374 (17) | 0.0464 (18) | 0.0065 (13) | 0.0141 (14) | −0.0028 (14) |
| C1 | 0.0297 (17) | 0.0334 (16) | 0.0393 (17) | 0.0024 (12) | 0.0002 (13) | 0.0015 (13) |
| N1 | 0.0365 (17) | 0.0561 (19) | 0.0242 (13) | 0.0054 (12) | 0.0092 (12) | 0.0040 (11) |
| N5 | 0.0277 (14) | 0.0401 (15) | 0.0229 (11) | 0.0069 (11) | 0.0135 (10) | 0.0056 (10) |
| Cu1—N5i | 1.930 (2) | N4—N2 | 1.354 (4) |
| Cu1—N5 | 1.930 (2) | C4—N5 | 1.293 (4) |
| Cu1—N4 | 1.963 (2) | N3—N1 | 1.348 (4) |
| Cu1—N4i | 1.963 (2) | C3—C2 | 1.386 (5) |
| N6—C1 | 1.358 (4) | C3—H3A | 0.9300 |
| N6—C4 | 1.369 (4) | N2—N1 | 1.302 (4) |
| C6—N4 | 1.335 (4) | C2—C1 | 1.354 (5) |
| C6—N3 | 1.336 (4) | C2—H2A | 0.9300 |
| C6—C5 | 1.455 (4) | C1—H1A | 0.9300 |
| C5—C3 | 1.380 (4) | N5—H5A | 0.9000 |
| C5—C4 | 1.435 (4) | N5—H5B | 0.9000 |
| N5i—Cu1—N5 | 180 | C6—N3—N1 | 105.3 (2) |
| N5i—Cu1—N4 | 90.97 (10) | C5—C3—C2 | 122.1 (3) |
| N5—Cu1—N4 | 89.03 (10) | C5—C3—H3A | 118.9 |
| N5i—Cu1—N4i | 89.03 (10) | C2—C3—H3A | 118.9 |
| N5—Cu1—N4i | 90.97 (10) | N1—N2—N4 | 108.2 (3) |
| N4—Cu1—N4i | 180 | C1—C2—C3 | 118.5 (3) |
| C1—N6—C4 | 124.1 (3) | C1—C2—H2A | 120.7 |
| N4—C6—N3 | 110.1 (3) | C3—C2—H2A | 120.7 |
| N4—C6—C5 | 125.5 (3) | C2—C1—N6 | 120.3 (3) |
| N3—C6—C5 | 124.4 (3) | C2—C1—H1A | 119.8 |
| C3—C5—C4 | 118.8 (3) | N6—C1—H1A | 119.8 |
| C3—C5—C6 | 121.3 (3) | N2—N1—N3 | 110.1 (3) |
| C4—C5—C6 | 119.9 (3) | C4—N5—Cu1 | 132.2 (2) |
| C6—N4—N2 | 106.2 (2) | C4—N5—H5A | 104.2 |
| C6—N4—Cu1 | 128.3 (2) | Cu1—N5—H5A | 104.2 |
| N2—N4—Cu1 | 125.5 (2) | C4—N5—H5B | 104.2 |
| N5—C4—N6 | 119.4 (3) | Cu1—N5—H5B | 104.2 |
| N5—C4—C5 | 124.5 (3) | H5A—N5—H5B | 105.5 |
| N6—C4—C5 | 116.1 (3) | ||
| N4—C6—C5—C3 | −178.6 (3) | C6—C5—C4—N6 | 176.9 (3) |
| N3—C6—C5—C3 | 1.2 (5) | N4—C6—N3—N1 | 0.1 (3) |
| N4—C6—C5—C4 | 3.1 (4) | C5—C6—N3—N1 | −179.8 (3) |
| N3—C6—C5—C4 | −177.1 (3) | C4—C5—C3—C2 | 0.5 (5) |
| N3—C6—N4—N2 | 0.1 (4) | C6—C5—C3—C2 | −177.8 (3) |
| C5—C6—N4—N2 | 179.9 (3) | C6—N4—N2—N1 | −0.2 (4) |
| N3—C6—N4—Cu1 | −176.5 (2) | Cu1—N4—N2—N1 | 176.5 (2) |
| C5—C6—N4—Cu1 | 3.4 (4) | C5—C3—C2—C1 | 0.8 (5) |
| N5—Cu1—N4—C6 | −7.2 (3) | C3—C2—C1—N6 | −1.1 (5) |
| N5—Cu1—N4—N2 | 176.9 (3) | C4—N6—C1—C2 | 0.1 (5) |
| C1—N6—C4—N5 | −179.3 (3) | N4—N2—N1—N3 | 0.2 (4) |
| C1—N6—C4—C5 | 1.2 (4) | C6—N3—N1—N2 | −0.2 (4) |
| C3—C5—C4—N5 | 179.0 (3) | N6—C4—N5—Cu1 | 175.8 (2) |
| C6—C5—C4—N5 | −2.6 (4) | C5—C4—N5—Cu1 | −4.7 (5) |
| C3—C5—C4—N6 | −1.4 (4) | N4—Cu1—N5—C4 | 8.1 (3) |
| H··· | ||||
| N5—H5A···N2i | 0.90 | 2.50 | 2.902 (4) | 108 |
Selected bond angles (°)
| N5i—Cu1—N5 | 180 |
| N5—Cu1—N4 | 89.03 (10) |
| N5—Cu1—N4i | 90.97 (10) |
| N4—Cu1—N4i | 180 |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.90 | 2.50 | 2.902 (4) | 108 |
Symmetry code: (i) .